Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048473_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:156924729:156931203:-1 gene:Zm00001d048473 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ubiquitin-conjugating enzyme family%3B Ubiquitin-conjugating enzyme E2 I

Sequence

ATGTCTGGGGGAATCGCCCGCGGCCGCCTTGCCGAGGAGCGCAAGGCCTGGCGCAAGAAC
CACCCGCACGGTTTCGTCGCAAAGCCGGAGTCGCTGCCCGACGGGACGGTGAACCTTATG
ATTTGGCACTGCACCATCCCCGGCAAGCAAGGGACTGATTGGGAAGGTGGATACTTCCCA
CTCACCCTTCATTTCAGTGAGGATTACCCTAGCAAGCCTCCCAAGTGCAAGTTCCCTCAG
GGTTTCTTCCACCCAAATGTCTATCCTTCTGGAACAGTCTGTCTTTCGATCCTTAATGAA
GATAGTGGTTGGAGACCAGCTATTACTGTTAAGCAGATTCTCGTCGGGATCCAGGACTTG
CTAGATCAGCCAAATCCTGCTGATCCTGCTCAAACGGATGGCTATCACCTTTTTATCCAG
GATCCTACAGAATATAAGAGGCGTGTTAAACTGCAGGCGAAGCAGTATCCCGCGTTGGTC
TGA

Peptide Sequence

PEP ID

Zm00001d048473_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:156924729:156931203:-1 gene:Zm00001d048473 transcript:Zm00001d048473_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ubiquitin-conjugating enzyme family%3B Ubiquitin-conjugating enzyme E2 I

Sequence

MSGGIARGRLAEERKAWRKNHPHGFVAKPESLPDGTVNLMIWHCTIPGKQGTDWEGGYFP
LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
LDQPNPADPAQTDGYHLFIQDPTEYKRRVKLQAKQYPALV

Transcript Sequence

Transcript ID

Zm00001d048473_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:156924729:156931203:-1 gene:Zm00001d048473 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative ubiquitin-conjugating enzyme family%3B Ubiquitin-conjugating enzyme E2 I

Sequence

CATCGCGCGTCATGGCCTGCCCGCAACCCGGCACTCCCCTGACACGCCGGCTCCGCAGGC
AACCGCCCTCCTGGAGCCCACTCGCCAGGGAGAAAGCCGCGGAAAATAAGGGATGGAAGA
AACACAGAAAAGGCCGGCTAGTGAAGAGGAGGGGGCGTAAGTTCTATTCGCGCAACCGCG
TAGAAAAAAAAAAGGTCCAGTCCTCAAACTCTACAGCGGGGGCGAGCCGAGGAAGAAGAG
GTCGCCGCCGCCGCCACCGCTTCCATGTCTGGGGGAATCGCCCGCGGCCGCCTTGCCGAG
GAGCGCAAGGCCTGGCGCAAGAACCACCCGCACGGTTTCGTCGCAAAGCCGGAGTCGCTG
CCCGACGGGACGGTGAACCTTATGATTTGGCACTGCACCATCCCCGGCAAGCAAGGGACT
GATTGGGAAGGTGGATACTTCCCACTCACCCTTCATTTCAGTGAGGATTACCCTAGCAAG
CCTCCCAAGTGCAAGTTCCCTCAGGGTTTCTTCCACCCAAATGTCTATCCTTCTGGAACA
GTCTGTCTTTCGATCCTTAATGAAGATAGTGGTTGGAGACCAGCTATTACTGTTAAGCAG
ATTCTCGTCGGGATCCAGGACTTGCTAGATCAGCCAAATCCTGCTGATCCTGCTCAAACG
GATGGCTATCACCTTTTTATCCAGGATCCTACAGAATATAAGAGGCGTGTTAAACTGCAG
GCGAAGCAGTATCCCGCGTTGGTCTGAGAACTTCGCCCTACTAGGGATCCAAGCTGCACA
TTCGCATAGTTGTTGCTAGTGTCTTGAATGGAAGACTAAAGGTAACATGGTGCTTTGAGG
AGTAACTATCGCCATTCTGGACCTAACAGTGTTATTTAACTATTTGGAGTGTTTTTTTGC
GGGATGATGTGAAAACCTTGCTGTGTCTGGTCATCAAGGATTGCTGATTTGTCTATAATG
CCTTGTTCGGATATTTCTATCCCATACGGATTGGATGTGATTAAAAAAATAATGAATTAA
ACCTACTCAATACTACTCAATCCACATGGATTAAGAGCAAAACGAATAAGCCCTAAGACT
TTTTTTCGGTTATTCTTATTCGACATGGATTGAATAAGATTGAAAAAATATGAATAATTT
GACTTCTATGGATTTAAACCCATCCTATTCTGTCCAATCCACACGCATTGTGATCGAAAC
GAAGAGGCTCTAAATGGGAATAATTGCACATGAATTGTGTCCTATCACGTTTCAGCTGAG
GACACTTCTGGTTGTAGTCATCATGTTCCTCTTGCCAACGTGTTGTATTATGTAGCCTAA
ATGAACATTCTTTAACATTGCCAAATGCAATTTTCTGAAGTGTTGAGGTGCAATGGAGCA
TTATTTGTCAGCTTCATTCCTTGATTGAAGTGCTACTTCGAGCTTTTGTTCCTGTTTGAA
TTTATAGAGCTAATAGTGACAGCTGCTAAAATTAGTTGAAGGCATTTAAATAGTCCAGCC
GAAGACATCCAAACACCCCTCGGCTAATAGTTCAACTAACTATTTATTATTTCATTATCT
GATTCAACTCAGTTAAAATCAGCTAGTGCTGACTTGACTAGTCATTTTTAGCCGTTCCAT
AGTGCACCACACAAGTAACTAGTATGCCAATTATTTATCCGTCTATACATGGCATAAGTA
CCACTAAAAAAAGTTAGTGGACGAGACACTTTTTTGCTGTTTGAGTGAGTGTCTATCGTT
GGGTCGCTCGGCATCCGAAGCTATATGACTCAAACTCAAACACTTCCGAATCATCTTCAA
ATCCTCTAATGACATCTTTGTAATCGTATGAAAAAAGAATAAAAAATAAAGGGGATGTAG
CTCATGATGCACAACTTATGTGTGACTATATCTCCATGACTCATTTTATTGAATATCTCT
ACTTACTCATTTTAACTTCTCTTTTTTATCTACTCATTCATCATAAGTAAATTGAAGGGA
GAATGAATCATATTGATTTAATCATGTCACCCTGTTTTGGTTCTCTAGAGAAATCTTAAC
AGGTGTTCAACACTCAACAATTGCTAATAAAGTTTGACCAACTTATATAAAATGTGGAAC
GTTATAGTCTTAACCTTGTTCTTGATTAACCTTACACTACACTTTTCCTTACATCCTAGC
TGAATACCAACCATAATTGTACTAATTTATTTTTGCTGAATTTGCTGCTTAGAACAAGAT
CAACATGAGGAAGACTACTATAAAGATTGTGAGTTCTAGGCCATTGTTGCTTCGATCAAC
CACCATGTGGATAGTCGTTAGTTTTCTAGCTTATGTTATAAAGATATTCAATTTATGTAA
TAAAGTTTATGATATTGGTTTGC