Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048471_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:156890330:156894199:-1 gene:Zm00001d048471 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 20 description:Putative knotted-like transcription factor family protein

Sequence

ATGCAGGGCGGCGGCGCCGCCGCGGCAGCGGCGGAGGCGGAGGAGCGGCAGCTGCTCAAG
GGGGAGATCGCGGTGCACCCGCTGTGCGAGCAGCTGGTGGCGGCGCACGTGGGGTGCCTG
CGCGTGGCCACGCCCATCGACCACCTCCCCCTCATCGACGCCCAGCTCGCGCAGTCCAGC
GGCCTCCTCCACTCCTACGCCGCCCACCACAGCCCCTTCCTCTCCCCGCACGACAAGCAC
GACCTCGACTCCTTCCTCGCGCAGTACCTGATGCTGCTGTGCTCGTTCCGGGAGCAGCTG
CAGCAGCACGTCCGGGTGCACGCCGTGGAGGCCGTCATGGCATGCCGCGAGATCGAGCAG
TCCCTGCAAGACCTAACTGGGGTGACGCTGGAGGAAGGGACGGGAGCGACCATGTCGGAG
GAGGACGAGGACGAGGCGCCGATGCTGGAGGTGGGTCTGGTGGACATGGGCTCCGACGGG
CACGACATGCCCACCGACTCCGAGCGCTCACTCATGGAGAGGGTCCGACAGGAGCTTAAG
ATCGAGCTCAAGCAGGGTTTCAAGTCAAGAATAGAGGATGTGAGGGAGGAGATTCTGAGG
AAAAGGAGGGCCGGGAAGCTGCCTGGGGACACCACCAGCATCCTCAAGCAATGGTGGCAG
CAGCACTCCAAGTGGCCATACCCCACGGAGGACGATAAGGCGAGGCTCGTTGAAGAGACC
GGCCTGCAGCTGAAACAAATCAACAACTGGTTCATCAACCAGAGGAAGAGGAACTGGCAC
AACAACTCCCAGACGTCAACCCTCAAATCAAAGCGTAAAAGGTGA

Peptide Sequence

PEP ID

Zm00001d048471_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:156890330:156894199:-1 gene:Zm00001d048471 transcript:Zm00001d048471_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 20 description:Putative knotted-like transcription factor family protein

Sequence

MQGGGAAAAAAEAEERQLLKGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSS
GLLHSYAAHHSPFLSPHDKHDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQ
SLQDLTGVTLEEGTGATMSEEDEDEAPMLEVGLVDMGSDGHDMPTDSERSLMERVRQELK
IELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQQHSKWPYPTEDDKARLVEET
GLQLKQINNWFINQRKRNWHNNSQTSTLKSKRKR

Transcript Sequence

Transcript ID

Zm00001d048471_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:156890330:156894199:-1 gene:Zm00001d048471 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Homeobox-transcription factor 20 description:Putative knotted-like transcription factor family protein

Sequence

GTGCGCAAACCACCAACCAGAGCGAGTACCAACCGGCCGGCCCGCCCAACAAGCAGGCGG
CTAGCCATCGACGACCGAACACATCGAGCTGCCCCCCGGCCGGTCATATATATATGCAGG
GCGGCGGCGCCGCCGCGGCAGCGGCGGAGGCGGAGGAGCGGCAGCTGCTCAAGGGGGAGA
TCGCGGTGCACCCGCTGTGCGAGCAGCTGGTGGCGGCGCACGTGGGGTGCCTGCGCGTGG
CCACGCCCATCGACCACCTCCCCCTCATCGACGCCCAGCTCGCGCAGTCCAGCGGCCTCC
TCCACTCCTACGCCGCCCACCACAGCCCCTTCCTCTCCCCGCACGACAAGCACGACCTCG
ACTCCTTCCTCGCGCAGTACCTGATGCTGCTGTGCTCGTTCCGGGAGCAGCTGCAGCAGC
ACGTCCGGGTGCACGCCGTGGAGGCCGTCATGGCATGCCGCGAGATCGAGCAGTCCCTGC
AAGACCTAACTGGGGTGACGCTGGAGGAAGGGACGGGAGCGACCATGTCGGAGGAGGACG
AGGACGAGGCGCCGATGCTGGAGGTGGGTCTGGTGGACATGGGCTCCGACGGGCACGACA
TGCCCACCGACTCCGAGCGCTCACTCATGGAGAGGGTCCGACAGGAGCTTAAGATCGAGC
TCAAGCAGGGTTTCAAGTCAAGAATAGAGGATGTGAGGGAGGAGATTCTGAGGAAAAGGA
GGGCCGGGAAGCTGCCTGGGGACACCACCAGCATCCTCAAGCAATGGTGGCAGCAGCACT
CCAAGTGGCCATACCCCACGGAGGACGATAAGGCGAGGCTCGTTGAAGAGACCGGCCTGC
AGCTGAAACAAATCAACAACTGGTTCATCAACCAGAGGAAGAGGAACTGGCACAACAACT
CCCAGACGTCAACCCTCAAATCAAAGCGTAAAAGGTGACCAATAATATAATATGCCCCCG
CTCATCCGATGCATGTGATGGAGAGCTGCGCCACCATGTACTGCACACCTGACACGTATA
CCAATTACCAACACGCTAATCAAACGACGTACGGCCATGCATGGCGACTCACAAGAAATA
AAGAGGATCGATCGATTCAACTGTATATTTCTAGTCATTAGTCTGACCACTGGCATATTT
GCTTGCTGCTGTGAT