Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048470_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:156886110:156889458:1 gene:Zm00001d048470 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLAC8 family protein
Sequence

ATGCTTCGCAAAAGGGCTCTCTACAATGACATGTCAAGATATGTCTGTTGCGCTGGCTAC
ATGCCATGCAGTGGAAAGTGTGGCGAGAGCCGGTGCCCAGAGTTCTGTCTTGCAACTGAG
GTGTTCCTTTGCTTTGGCAATTCAGTTGCATCAACCCGCTTCTTGCTGCAAGATGAATTT
AACATACAGACCACTCAGTGTGACAACTGCATCATTGGCTTCATGTTATGCCTTCAACAA
GTTGCTTGCATCTTCTCTATAGTTGCAGCTATTGTTGGTAGCGAGGAGCTTTCAGAGGCT
TCCCAGATCCTTAATTGTCTGTCTGATTTGGTCTACTGGACGGTTTGTGCATGTATGCAG
ACGCAGCACAAAGTCGAAATGGACAAGAGGGATGGAAAGTTCAGCCCACAGCCTATGGCA
GTGCCCCCGGTGCAACAAATGTCACGCATCGATCAGCCTATGCCGCCTCCTGCTGGATAT
GCACCGCAACCAGCATATGGGCAGCCTTATGGTGGCTATCCATCTCCTCCTGGCCAAGGT
TATCCGCCTCCTCCTGGCCAAGGTTATCCGCCAGCTGGATACTCGCAGGGCGGTGCATAC
CCTCCACCCGCTCAAGGTTACCCACATGGTGGTGGATATCCTCCACCTGGTCAAGGTTAC
CCCCAGGGTCAGGGTGGTGCATATCCTCCGCCTGGTTCTTACCCTCCACAAGGTTCCTAC
CCCCCAGCAGAGGGCTCCTACCCAGCACAAGGTTCCTACCACCCAGCACAGGGCTCCTAC
CCAGCACAAGGTTCCTATTCCCCAGCACAGGGCTCCTACCCAGCACAAGGTTCATATCCC
CCACCCCCAGCACAAGGTTCATATCCCCCAGCACAGGGCTCGTACCCAGCACAAGGTTCC
TACCCCCCACAGGCTTACCCTGGCAAGTAA

Peptide Sequence

PEP ID

Zm00001d048470_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:156886110:156889458:1 gene:Zm00001d048470 transcript:Zm00001d048470_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLAC8 family protein
Sequence

MLRKRALYNDMSRYVCCAGYMPCSGKCGESRCPEFCLATEVFLCFGNSVASTRFLLQDEF
NIQTTQCDNCIIGFMLCLQQVACIFSIVAAIVGSEELSEASQILNCLSDLVYWTVCACMQ
TQHKVEMDKRDGKFSPQPMAVPPVQQMSRIDQPMPPPAGYAPQPAYGQPYGGYPSPPGQG
YPPPPGQGYPPAGYSQGGAYPPPAQGYPHGGGYPPPGQGYPQGQGGAYPPPGSYPPQGSY
PPAEGSYPAQGSYHPAQGSYPAQGSYSPAQGSYPAQGSYPPPPAQGSYPPAQGSYPAQGS
YPPQAYPGK

Transcript Sequence

Transcript ID

Zm00001d048470_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:156886110:156889458:1 gene:Zm00001d048470 gene_biotype:protein_coding transcript_biotype:protein_coding description:PLAC8 family protein
Sequence

GAAGGTACAGTGCCCCAGCCCCGCGCCCCCTAGACCAAAGCAGACCAGAATCCGCCCTAC
CAATCGCCTCCCCAGATCGGCGGTCCACCCGGAGGCGGCGATGGCGTCGTCGCAGGCGAA
CCTCGACAAGATGCAGCTCCGCCAGAGCTACCGCAACGTCTGGCACACCGACATGACGAA
CGCCATCCAGGCCGACTTCCCCTACTGCTGCCTCGCGCTGTGGTGGTGAGCCATCCATCG
ACCCTGCCTAGCAGATCTCACCGTCACCGTCTTCTGCGGGCTTTGAGTCTCGAACCCCTA
GCCTTCCGTAGATCCGAGGACACTTAATTTGTCGCTGTGGCTAGGGTTTTTGGGGATTTT
GGTCTCCAAGGGTTCCGCGTTGTGCATTGCCGCTTTTTCGAGGAGCATATCCTGAACTAA
ATTGTTGCAGTATAAAAGCTCATTCTACATTATATTATATACATTTTAGATTAGGGGAGG
CTGTAGGGGCTCCATGGTATCCGAAGCGGTAGGGGGGGCTCGAGCCCCCTGCCCCACCGC
TGGATCCGTCCCTGATCCTGAATTTGTTATTCCATCTGCGTTTAAAGTTTATTCCGCGGC
AGCAAGACGACTAATGAAAGTACAAATGAATGGATGATGATAGCGGAATCCGCTGGGCCT
GCCAGATTGTCTCTAGGATTTTGACAAGTGCACGTAGCCCATGTAGTAGCTGCCGCAAAC
CCACAAGAGGATAGATGTGAGATGTCAGTTTCATCTTCCTCCCTGGAGCCAGTTAATGTA
TAAACCATAAACAGGAACATGGAAATGATCCCCCACCCCTACATCCCTCTGTTAGATGCA
CCAGGTTAATTGGGCTAATGAGCATTGAAAGAGTGCATCATTTTTGTTTCTGATGGGTCC
TGACCAATAATGTCGGCTCCCTGCCTTCAAGTTCATTCCAGAGTATGCATAGCCAAACCA
TGTAAGGATTTCATTTCTGTTCCAAAAAGAAGGGACCAAGTCTAATAAAAAAGATCACTG
TATTTCCATTGTTTCTATGATAGGTCTAATTTGGTTCCACCGTTACCATGTGGCGCTAGT
CTATCATGCGTGACAAAGCTTTTAATGTGCTTGCATTGGTAGACATCGACATAGGTCACC
ATTTGGAAATGTGAACAATTTTACCCGTTCGTTAATCTGCTGCATTCTCCTGTTTCTGTT
CAGTGGACCTTGCGTGTCGTACATGCTTCGCAAAAGGGCTCTCTACAATGACATGTCAAG
ATATGTCTGTTGCGCTGGCTACATGCCATGCAGTGGAAAGTGTGGCGAGAGCCGGTGCCC
AGAGTTCTGTCTTGCAACTGAGGTGTTCCTTTGCTTTGGCAATTCAGTTGCATCAACCCG
CTTCTTGCTGCAAGATGAATTTAACATACAGACCACTCAGTGTGACAACTGCATCATTGG
CTTCATGTTATGCCTTCAACAAGTTGCTTGCATCTTCTCTATAGTTGCAGCTATTGTTGG
TAGCGAGGAGCTTTCAGAGGCTTCCCAGATCCTTAATTGTCTGTCTGATTTGGTCTACTG
GACGGTTTGTGCATGTATGCAGACGCAGCACAAAGTCGAAATGGACAAGAGGGATGGAAA
GTTCAGCCCACAGCCTATGGCAGTGCCCCCGGTGCAACAAATGTCACGCATCGATCAGCC
TATGCCGCCTCCTGCTGGATATGCACCGCAACCAGCATATGGGCAGCCTTATGGTGGCTA
TCCATCTCCTCCTGGCCAAGGTTATCCGCCTCCTCCTGGCCAAGGTTATCCGCCAGCTGG
ATACTCGCAGGGCGGTGCATACCCTCCACCCGCTCAAGGTTACCCACATGGTGGTGGATA
TCCTCCACCTGGTCAAGGTTACCCCCAGGGTCAGGGTGGTGCATATCCTCCGCCTGGTTC
TTACCCTCCACAAGGTTCCTACCCCCCAGCAGAGGGCTCCTACCCAGCACAAGGTTCCTA
CCACCCAGCACAGGGCTCCTACCCAGCACAAGGTTCCTATTCCCCAGCACAGGGCTCCTA
CCCAGCACAAGGTTCATATCCCCCACCCCCAGCACAAGGTTCATATCCCCCAGCACAGGG
CTCGTACCCAGCACAAGGTTCCTACCCCCCACAGGCTTACCCTGGCAAGTAAAGATGACA
CGACAGGTGAACCAAATATCGTGAACATGTAAACAGTAGGACCGCTTTAGCGCTATAGGT
TATTTTGATAAAATTCTTGTTACTGTTCAGGGTGGCATTCGGTGAACAATATTTCTATTT
TATACGGTCAACATCTTGTGTTGATCATGTCGTGTTGAGTCTATCCTCTTTTTTCTTTTC
CTGAATAAGGAATGGCATTCAACTGGAATGTATTTGAATTTGGTGACAACTCACGTGGAT
ATTGTTTTGGTT