Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048454_T011
CDS Infomation	cds chromosome:B73_RefGen_v4:9:156673805:156679404:1 gene:Zm00001d048454 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 17 description:SMAD/FHA domain-containing family protein isoform 1%3B SMAD/FHA domain-containing family protein isoform 2
Sequence	ATGAACATACTTTTGAGTGCTGACGAGCACTGCCTAGGACGATCTGTTGAGGAGCGGTTT CGGATTTTTGCCCAGCAGATCAGCGGGATGCATTGCAAAATATACAGGGACACTGTCTTA GGGGAGCTGAACCGCCACGAGCCTGTGCCTGTTTTCCTCAAGGACACAAGCTCAAATGGC ACATTCATCAACTGGAAAAGGCTCAAGAAAAATTCATCCCCGGTCAAGCTTAATCATGGC GACATTATATCATTATCATCACCTCCTCATGACGACAATTCCTTTGTATTTGTCTACCGC GAAGTTAATGCAATCAGTCGTGTAGAGAATGGGGCTCCCATTCTTAAAAGGAAGTCAGTG GAGGGTGGTTCTGGAAGCAAGAGGCTAAAGGGTCTTGGTATTGGTTCTCCTGATGGTCCT GTTTCACTAGATGATGTCCGAAGACTAGAAAAATCTAATGCTGATCTCAGGGAACAACTT GAGGCACATGTTGTGACAATTGAGACTTTGAGGGCTGAAATAAAAACAGCCCAAGTGCAG CATGGAAAGGAACTTGAGGAGCTAAGAGAAACTATATCGAGTTCTTATCTGGATCAAACT AAATCTCTTCGGTCAGCACTTGAGGAGAAACAGAAGCAAATAGATTCACTCAGTACATCA AATACAGAGTTACAGAACTCTATAAAAGATCTGGATGAAAGGCTTAATGCATCTAAACAA TCACGTGCAGATGCTGACGAGATAATTTCAAGCCAGAAAGGAATGATATGTGAGCTTGAG GGACAGCTAAATGAGGAGAGAAATTTAAGAAGAGAAGAGCGTGATAAGGCTGCACATGAC ATGAAATCTGCATTGCATAAAGTGCAAGCCGAGGCTCAAGAAGAAATTAAGAAACAGGCG GAGTCTTACCTTAGGCAACAAAGGGAGCAGAAAGAAGTTATTAGCAAGCTTCAGGAATCA GAAAAAGAAACCCGTTTGTTTGTGGAAACTTTGAGGTCCAAGCTGGAAGATGCTCGAGAT AATCTTGTAACATCCGAGAAAAGAGTAAGAGAGCTGGAAGCTCAGCTTCAGGACGAGCAG ATGGTATCAGCCAATAATCGAAAGAAGACAGAAAATCTGGAAGCTGAATTGAGAAAACTG AAGAAGGAACTCGACAATGAGAAGCAGGCTGCTCGAGAAGAAGCATGGGCAAAGGTTTCA GCTCTTGAGCTTGAAATAGCTGCAACGATTAGAGATCTATCAATTGAGAAACAGAGGTAT CAGGGAGCTAGAGAACGGATTATTCTACGGGAGACTCAGCTGCGTGCTTTCTATTCAACC ACAGAAGAAATCTCTTCTCTGTTTGCGAAACAGCAGGAACAGCTGAAAGCTATGCAGAGA ACTTTGGAGGATGAAGAGAACTATGAGAGCACCTTAATGGGTGTGGATCTTAATAAAGTA CCTCTAACCACTGATAATGCTGGTATGAAGCCAGTAGACTGCTCAAAAAATACAGTGGGA GCTTCAAGTGCTTCACCAGAAAATACTCAGGTAAGTGAACATGATTCCAGTGACGAAGAT GCCAACATGACTGAGCAGCAGGATGATGATGGTACTGCCATTGGTGGCAGCACTCAAGGT CTAGAATGCACCAGTCCAGAAAGGTCAGAGGGGAGATTGAAGTCAGGTTTTCATGGCAAT CCGGTTTCTACAGCTCCTGAGAGAGAGGTTACAGATACCGAGCAAGTTCCCGAGACAGAT AGCCAAGCTGGTAATGCTGGTTGCGATGACCAAAGATGTGACAACACGGGAGGAGAGACT ATGCCACTAGAAGATGATATGCTGCTCCCAGATAACGAGGAACCTACTGCATTGCTGAAA GATGTAGGGCAGCCACAAGCAAATGTGGTTCCTATTCCAATCCCCGGTGATGGCGTTGGG CACTGTTTCGAAGAAAAACATGAGGGTGCCTGCTCTGAGAGCAAACGGGAGGACACACAT GCTGGAGCCATCAGAACGGCTGATCTGTTGGCCTCAGAAGTCGCTGGGAGCTGGGCAGTG GAAACAGCTCCGTCTGTCAATGGGGAGAACGAATCTCCAAGGAGCTTGGGCGATGCTACA GAGCACGATGAAGCTGGAGGCAGCGTGGCAGGCGATGCTTTGGTAACTCTGGTGAACTCA GAGGGCCAGGCGGCTGGGAGCCAGAACAATGTTGAGCGTGGCAGCTCCAAAATAACCCAT CATCATCATCATCATCGTGCCATGATTGGAATTGTTGATCCTGAGTTCAGGAAGCAAATG TCCGGCAGAAGCGGAGTTGGAAACGAGGAACCCATGTCTGACGCCGAGACGGGTGAGGGC ATCGAGGAAGGCGATTCAGATTCAGGTTCAGACGGCAGTGACAGCGAGGAGGCTATGGTT GAGGATTCTGTCGTTTAG

Peptide Sequence

PEP ID	Zm00001d048454_P011
PEP Infomation	pep chromosome:B73_RefGen_v4:9:156673805:156679404:1 gene:Zm00001d048454 transcript:Zm00001d048454_T011 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 17 description:SMAD/FHA domain-containing family protein isoform 1%3B SMAD/FHA domain-containing family protein isoform 2
Sequence	MNILLSADEHCLGRSVEERFRIFAQQISGMHCKIYRDTVLGELNRHEPVPVFLKDTSSNG TFINWKRLKKNSSPVKLNHGDIISLSSPPHDDNSFVFVYREVNAISRVENGAPILKRKSV EGGSGSKRLKGLGIGSPDGPVSLDDVRRLEKSNADLREQLEAHVVTIETLRAEIKTAQVQ HGKELEELRETISSSYLDQTKSLRSALEEKQKQIDSLSTSNTELQNSIKDLDERLNASKQ SRADADEIISSQKGMICELEGQLNEERNLRREERDKAAHDMKSALHKVQAEAQEEIKKQA ESYLRQQREQKEVISKLQESEKETRLFVETLRSKLEDARDNLVTSEKRVRELEAQLQDEQ MVSANNRKKTENLEAELRKLKKELDNEKQAAREEAWAKVSALELEIAATIRDLSIEKQRY QGARERIILRETQLRAFYSTTEEISSLFAKQQEQLKAMQRTLEDEENYESTLMGVDLNKV PLTTDNAGMKPVDCSKNTVGASSASPENTQVSEHDSSDEDANMTEQQDDDGTAIGGSTQG LECTSPERSEGRLKSGFHGNPVSTAPEREVTDTEQVPETDSQAGNAGCDDQRCDNTGGET MPLEDDMLLPDNEEPTALLKDVGQPQANVVPIPIPGDGVGHCFEEKHEGACSESKREDTH AGAIRTADLLASEVAGSWAVETAPSVNGENESPRSLGDATEHDEAGGSVAGDALVTLVNS EGQAAGSQNNVERGSSKITHHHHHHRAMIGIVDPEFRKQMSGRSGVGNEEPMSDAETGEG IEEGDSDSGSDGSDSEEAMVEDSVV

Transcript Sequence

Transcript ID	Zm00001d048454_T011
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:156673805:156679404:1 gene:Zm00001d048454 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHA-transcription factor 17 description:SMAD/FHA domain-containing family protein isoform 1%3B SMAD/FHA domain-containing family protein isoform 2
Sequence	CGGCGCGCGTTCCGGCAAAACGGGAGGCGAGGCCATCCGCGCGCGCGCGATGGCGCCGGA CCCGTGCGGCGACCTCGTGGTGACGCCGAAGACGGCGGCCAAGGACGAGGCGTCCTGCTC CGTGCCCACGCCGCCCAAGGTCACTCCCGACGAGGTGCGCGCGGTGGCGCGCAAGTTCGC GGACCAGCCTATCCAGGAGACGGAGCCCGACGTTTGGGCCGTCCTCACCGCCATCTCCAA GAAGGCCCGCCTCCGGCCCCAGGGATGAACATACTTTTGAGTGCTGACGAGCACTGCCTA GGACGATCTGTTGAGGAGCGGTTTCGGATTTTTGCCCAGCAGATCAGCGGGATGCATTGC AAAATATACAGGGACACTGTCTTAGGGGAGCTGAACCGCCACGAGCCTGTGCCTGTTTTC CTCAAGGACACAAGCTCAAATGGCACATTCATCAACTGGAAAAGGCTCAAGAAAAATTCA TCCCCGGTCAAGCTTAATCATGGCGACATTATATCATTATCATCACCTCCTCATGACGAC AATTCCTTTGTATTTGTCTACCGCGAAGTTAATGCAATCAGTCGTGTAGAGAATGGGGCT CCCATTCTTAAAAGGAAGTCAGTGGAGGGTGGTTCTGGAAGCAAGAGGCTAAAGGGTCTT GGTATTGGTTCTCCTGATGGTCCTGTTTCACTAGATGATGTCCGAAGACTAGAAAAATCT AATGCTGATCTCAGGGAACAACTTGAGGCACATGTTGTGACAATTGAGACTTTGAGGGCT GAAATAAAAACAGCCCAAGTGCAGCATGGAAAGGAACTTGAGGAGCTAAGAGAAACTATA TCGAGTTCTTATCTGGATCAAACTAAATCTCTTCGGTCAGCACTTGAGGAGAAACAGAAG CAAATAGATTCACTCAGTACATCAAATACAGAGTTACAGAACTCTATAAAAGATCTGGAT GAAAGGCTTAATGCATCTAAACAATCACGTGCAGATGCTGACGAGATAATTTCAAGCCAG AAAGGAATGATATGTGAGCTTGAGGGACAGCTAAATGAGGAGAGAAATTTAAGAAGAGAA GAGCGTGATAAGGCTGCACATGACATGAAATCTGCATTGCATAAAGTGCAAGCCGAGGCT CAAGAAGAAATTAAGAAACAGGCGGAGTCTTACCTTAGGCAACAAAGGGAGCAGAAAGAA GTTATTAGCAAGCTTCAGGAATCAGAAAAAGAAACCCGTTTGTTTGTGGAAACTTTGAGG TCCAAGCTGGAAGATGCTCGAGATAATCTTGTAACATCCGAGAAAAGAGTAAGAGAGCTG GAAGCTCAGCTTCAGGACGAGCAGATGGTATCAGCCAATAATCGAAAGAAGACAGAAAAT CTGGAAGCTGAATTGAGAAAACTGAAGAAGGAACTCGACAATGAGAAGCAGGCTGCTCGA GAAGAAGCATGGGCAAAGGTTTCAGCTCTTGAGCTTGAAATAGCTGCAACGATTAGAGAT CTATCAATTGAGAAACAGAGGTATCAGGGAGCTAGAGAACGGATTATTCTACGGGAGACT CAGCTGCGTGCTTTCTATTCAACCACAGAAGAAATCTCTTCTCTGTTTGCGAAACAGCAG GAACAGCTGAAAGCTATGCAGAGAACTTTGGAGGATGAAGAGAACTATGAGAGCACCTTA ATGGGTGTGGATCTTAATAAAGTACCTCTAACCACTGATAATGCTGGTATGAAGCCAGTA GACTGCTCAAAAAATACAGTGGGAGCTTCAAGTGCTTCACCAGAAAATACTCAGGTAAGT GAACATGATTCCAGTGACGAAGATGCCAACATGACTGAGCAGCAGGATGATGATGGTACT GCCATTGGTGGCAGCACTCAAGGTCTAGAATGCACCAGTCCAGAAAGGTCAGAGGGGAGA TTGAAGTCAGGTTTTCATGGCAATCCGGTTTCTACAGCTCCTGAGAGAGAGGTTACAGAT ACCGAGCAAGTTCCCGAGACAGATAGCCAAGCTGGTAATGCTGGTTGCGATGACCAAAGA TGTGACAACACGGGAGGAGAGACTATGCCACTAGAAGATGATATGCTGCTCCCAGATAAC GAGGAACCTACTGCATTGCTGAAAGATGTAGGGCAGCCACAAGCAAATGTGGTTCCTATT CCAATCCCCGGTGATGGCGTTGGGCACTGTTTCGAAGAAAAACATGAGGGTGCCTGCTCT GAGAGCAAACGGGAGGACACACATGCTGGAGCCATCAGAACGGCTGATCTGTTGGCCTCA GAAGTCGCTGGGAGCTGGGCAGTGGAAACAGCTCCGTCTGTCAATGGGGAGAACGAATCT CCAAGGAGCTTGGGCGATGCTACAGAGCACGATGAAGCTGGAGGCAGCGTGGCAGGCGAT GCTTTGGTAACTCTGGTGAACTCAGAGGGCCAGGCGGCTGGGAGCCAGAACAATGTTGAG CGTGGCAGCTCCAAAATAACCCATCATCATCATCATCATCGTGCCATGATTGGAATTGTT GATCCTGAGTTCAGGAAGCAAATGTCCGGCAGAAGCGGAGTTGGAAACGAGGAACCCATG TCTGACGCCGAGACGGGTGAGGGCATCGAGGAAGGCGATTCAGATTCAGGTTCAGACGGC AGTGACAGCGAGGAGGCTATGGTTGAGGATTCTGTCGTTTAGCTTAAACAGAAGTGACTG CTCACTGTAAATATACCTCAATTCGTTTTGTGTACCTTTCGTTGTATCATCATGCGTAGC GTAAGCCCCTCGTGTGCGTTTGATTATTTTATTCGTTAAGTGTCCTCAGCAGCTCGTGGT G