Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048451_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:156650453:156652270:-1 gene:Zm00001d048451 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCCACGTCCATGTCCGCTCCGGCTCCGACCCCCGTCCCGCTGACCTCCTTCGCCCTG CTGCGGCAACACCACTCGCAGCTCATCCGTCTCGGCGTCGCCTCCCACGCCGCCCACGCG CGCCGCCTTCTCTCCTTCCTTGCCCGGGACCCCGACTCCCACTTCCCGTACGCGAGCCGC CTCCTGGCGCACCACCCGGACCCGCACCCGGCGCTCTTCAACCCGCTCTTCTCCGCGCTC CCGACGCGCCACGCCGCGCGGCTCCTGGCCCTCATGCTATCCCTGCCCCTGCGCCCGGAC CACTTCACCTTCCCGCAAATCCTCCCGAGCGCCCAGCCGCTCCACCTGGTCGCCCAGCTC CACGCGCTGCTCCTCAAGCTCGGCTTCCACGCCCACACGCAGTCGCTCAACGCGCTGCTC GCCGCCTACCTCGCCAACGCGAGACCCGACCTCGCCTCCCGCGTCTTCCGCGGCGGCGGC GGAGCTCTCGACGTCGTGTCGTGGACCACGATGGTCGGCGGGCTCCTCAAGCTGGGGCTG TTCGACGACGCGCGGGTGCTGTTCGACGGGATGCCTGAGCGAAACCTGGTGTCGTGGAAC GCGATGATGTCCGGGTACGTCAAGGCCTGCAGGTTCCTGGACGCGCTGGAGGTGTTCGAC GAGATGCGGGCGCGCGGGGTGGACGGCAACGTCTTCGTCGCGGCTACCGCGGTGGTGGCG TGCACGGGCGCCGGCGCGCTGGCGCGCGGGAGGGAGGTGCACCGGTGGGTGGAGCAGAGC GGGATCCAGATGGACGAGAAGCTGGCCACCGCGGTGGTGGACATGTACTGCAAGTGCGGC TGCGTCGAGGAGGCGTGGCGTGTGTTCGAGGCCCTCCCGCTCGCTGCCAAGGGGCTCACG ACGTGGAACTGCATGATCGGCGGGTTCGCGGTGCACGGGCGGGGCGAGGACGCTCTGAAG CTGTTCGGACGGATGGAGAGGGAGGGCGTGGCGCCGGACGACGTCACGCTGGTGAACGTG CTCACTGCCTGCGCGCACGCGGGGATGCTCAGCGAGGGCCGCCACTACTTCAACTACGTT CCTCAGAGATACGGCATTGAGCCCAAGATGGAGCACTACGGCTGCATGGTCGACTTGTAT GGAAGAGCAGGGCGGCTGGAGGAAGCCAAGAAGGTTATCCAGGACATGCCGATGGAGCCA GACGTCGGCGTCCTCGGTGCGCTCTTCGGCGCGTCCAAGATACACGGCGACGTCGACCTG GGCGAGGCGATCGGGTGGCGCGTCATTGAGCTGGATCCCCAGAACAGCGGGCGCTATGTG CTGCTGGCGAACCTCCTCGCCACGGCCGGCCGGTGGGAGGACGTGGCCAGGGTCCGGCGG CTGATGGACGAGCGGAACGTGAGCAAGGAAGCAGGGCGGTCTGTGATCGAGGTCCAAGGT GAGGTCTGCGAGTTCCAGTGCGGCGGCCTGTGCCACCCCCGGGCGGAGGAGGTGTACGCC ATGGCCAGGGACATGATGAGGGAGATCAGGGCAGAGGGCTACGTGCCCGATACCCGGGAC GTGCTGCACGCCATTGCAGAGGAGGAGAAGGAGACGCCACTGCTTTACCATAGTGAGAAG CTGGCCATCGCCTTCGGGCTCCTGCACACCAGACCCGGCGACACGATGCGGATCACCAAG AATTTGAGAGTCTGTAGAGATTGCCATGAAGCGACCAAGTTCGTGTCTCGCGTCTTTGAG CGCCAGATTGTGGTCAGGGACAGGAACCGGTTCCACCATTTTAAGGACGGGCAGTGCTCG TGTAAAGATTATTGGTAA

Peptide Sequence

PEP ID	Zm00001d048451_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:156650453:156652270:-1 gene:Zm00001d048451 transcript:Zm00001d048451_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MSTSMSAPAPTPVPLTSFALLRQHHSQLIRLGVASHAAHARRLLSFLARDPDSHFPYASR LLAHHPDPHPALFNPLFSALPTRHAARLLALMLSLPLRPDHFTFPQILPSAQPLHLVAQL HALLLKLGFHAHTQSLNALLAAYLANARPDLASRVFRGGGGALDVVSWTTMVGGLLKLGL FDDARVLFDGMPERNLVSWNAMMSGYVKACRFLDALEVFDEMRARGVDGNVFVAATAVVA CTGAGALARGREVHRWVEQSGIQMDEKLATAVVDMYCKCGCVEEAWRVFEALPLAAKGLT TWNCMIGGFAVHGRGEDALKLFGRMEREGVAPDDVTLVNVLTACAHAGMLSEGRHYFNYV PQRYGIEPKMEHYGCMVDLYGRAGRLEEAKKVIQDMPMEPDVGVLGALFGASKIHGDVDL GEAIGWRVIELDPQNSGRYVLLANLLATAGRWEDVARVRRLMDERNVSKEAGRSVIEVQG EVCEFQCGGLCHPRAEEVYAMARDMMREIRAEGYVPDTRDVLHAIAEEEKETPLLYHSEK LAIAFGLLHTRPGDTMRITKNLRVCRDCHEATKFVSRVFERQIVVRDRNRFHHFKDGQCS CKDYW

Transcript Sequence

Transcript ID	Zm00001d048451_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:156650453:156652270:-1 gene:Zm00001d048451 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGTCCACGTCCATGTCCGCTCCGGCTCCGACCCCCGTCCCGCTGACCTCCTTCGCCCTG CTGCGGCAACACCACTCGCAGCTCATCCGTCTCGGCGTCGCCTCCCACGCCGCCCACGCG CGCCGCCTTCTCTCCTTCCTTGCCCGGGACCCCGACTCCCACTTCCCGTACGCGAGCCGC CTCCTGGCGCACCACCCGGACCCGCACCCGGCGCTCTTCAACCCGCTCTTCTCCGCGCTC CCGACGCGCCACGCCGCGCGGCTCCTGGCCCTCATGCTATCCCTGCCCCTGCGCCCGGAC CACTTCACCTTCCCGCAAATCCTCCCGAGCGCCCAGCCGCTCCACCTGGTCGCCCAGCTC CACGCGCTGCTCCTCAAGCTCGGCTTCCACGCCCACACGCAGTCGCTCAACGCGCTGCTC GCCGCCTACCTCGCCAACGCGAGACCCGACCTCGCCTCCCGCGTCTTCCGCGGCGGCGGC GGAGCTCTCGACGTCGTGTCGTGGACCACGATGGTCGGCGGGCTCCTCAAGCTGGGGCTG TTCGACGACGCGCGGGTGCTGTTCGACGGGATGCCTGAGCGAAACCTGGTGTCGTGGAAC GCGATGATGTCCGGGTACGTCAAGGCCTGCAGGTTCCTGGACGCGCTGGAGGTGTTCGAC GAGATGCGGGCGCGCGGGGTGGACGGCAACGTCTTCGTCGCGGCTACCGCGGTGGTGGCG TGCACGGGCGCCGGCGCGCTGGCGCGCGGGAGGGAGGTGCACCGGTGGGTGGAGCAGAGC GGGATCCAGATGGACGAGAAGCTGGCCACCGCGGTGGTGGACATGTACTGCAAGTGCGGC TGCGTCGAGGAGGCGTGGCGTGTGTTCGAGGCCCTCCCGCTCGCTGCCAAGGGGCTCACG ACGTGGAACTGCATGATCGGCGGGTTCGCGGTGCACGGGCGGGGCGAGGACGCTCTGAAG CTGTTCGGACGGATGGAGAGGGAGGGCGTGGCGCCGGACGACGTCACGCTGGTGAACGTG CTCACTGCCTGCGCGCACGCGGGGATGCTCAGCGAGGGCCGCCACTACTTCAACTACGTT CCTCAGAGATACGGCATTGAGCCCAAGATGGAGCACTACGGCTGCATGGTCGACTTGTAT GGAAGAGCAGGGCGGCTGGAGGAAGCCAAGAAGGTTATCCAGGACATGCCGATGGAGCCA GACGTCGGCGTCCTCGGTGCGCTCTTCGGCGCGTCCAAGATACACGGCGACGTCGACCTG GGCGAGGCGATCGGGTGGCGCGTCATTGAGCTGGATCCCCAGAACAGCGGGCGCTATGTG CTGCTGGCGAACCTCCTCGCCACGGCCGGCCGGTGGGAGGACGTGGCCAGGGTCCGGCGG CTGATGGACGAGCGGAACGTGAGCAAGGAAGCAGGGCGGTCTGTGATCGAGGTCCAAGGT GAGGTCTGCGAGTTCCAGTGCGGCGGCCTGTGCCACCCCCGGGCGGAGGAGGTGTACGCC ATGGCCAGGGACATGATGAGGGAGATCAGGGCAGAGGGCTACGTGCCCGATACCCGGGAC GTGCTGCACGCCATTGCAGAGGAGGAGAAGGAGACGCCACTGCTTTACCATAGTGAGAAG CTGGCCATCGCCTTCGGGCTCCTGCACACCAGACCCGGCGACACGATGCGGATCACCAAG AATTTGAGAGTCTGTAGAGATTGCCATGAAGCGACCAAGTTCGTGTCTCGCGTCTTTGAG CGCCAGATTGTGGTCAGGGACAGGAACCGGTTCCACCATTTTAAGGACGGGCAGTGCTCG TGTAAAGATTATTGGTAA