Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048442_T024
CDS Infomation	cds chromosome:B73_RefGen_v4:9:156484401:156492237:-1 gene:Zm00001d048442 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase-related protein
Sequence	ATGAGGGACGCCATCGCCCACCACGGGGAGGCCTCCACGCCGCTTCTCCTGCGGGCGCAT GGTACTGTCCTCGCCCGCGCCGCCTCCGTCCTTGACGACCCGGCCGCCCGCGCGCGCCGC CACCGGGCAGCGCTCCAGGCGGCCCAGCGCGCCGTCGAGCTCGCGCCGGACTCCATCGAG CTCTCCCACTTTCATGCCATGCTGCTCTTCGACGCCGCCACCGACACCCGCGCCTACGAG GAGGTCGTCGCCGAGTGCGAGCGCGGCCTCAGCATCGAGGCCCCTTCCGACCCCGCGCCC CACTCCCTCAGGCTGCCCGGCCCCGACGTCGACCAGGTCCAGTCCGAGCTCCGCAACCTG ATCCAGAAGGCCAATCTCGCCTCAGTATCTACCTGGTTTAAAACCCTGCGTAGCGCGGGC GACGATAAGTTTCGCCTCATCCCCGTGCACCGTTTTGCCGACGAACCAATGGAGGCCCGG CTCGTCCCCTCGGCGCCCTCTCCGCGCCGCTCAAACGAGATCAAGAAGGCGACCAAGACC TCCGAGGAGCGCCGCCAGGAGATCGAGGTACGCCTGGCTGCCATGAGGCTGCTGCAGCAG CAGAAGGAGCAGAGCAATGGTGTTGTGTCTGCCACCCCTGCCTCTTCCCAGTCACAGGGA GATGAGGCCCCCTCATCGTCTCTGTCATTGGTGGGTGGACATCGAGCTGACAGGAGAAAA GGCGGGTCTAGGAAAGCAACAGGCTTATCTGCATCTGAACGCACTGACCAGGCGCGTGCC TACTGGGGTTCGATACCAGTGGATCAAAGGCTTGCGTTCTTAAACACTAGCATTTCTGAG CTCAAGTCACACTATGCTTCTGCAATCCATAAGGAGAAAGATGTTGCCAGTGCAGCATCT GATGTGCTGAATGAGGTGATACGATTTGCCAACAAGCATGGCAACTGGGAGTTCATGGTA TGTGGTAGGTGTCGGGGACAGTTTACAGATGTTGAGGCACACCGGTGGCATGTCATGGGG GAACATGTTGGGCTACTCTCATCTGAGCTGCAGGAAATGGTGCCGCAGGAGATTGATGCT GACTGGGTAGAAATGCTCATTGGTTGGAACTGGAGTCCATTGGATGCTACTGCAGCACTG AAACTGTTTGAGGAAGATCAAACTGACAATCTTGGAACAGATAGGGGCAAAGAATCGGAT CCGACGGATAATTGGAGTAACAAAGACAACCCTGACATGTCAGAATCCTCTGCCTCGCCA CACAACGGGGAGTGTAATGGCTTTGGAGTGGTGGTGAGGGAAGGTGACGGTACGTGGCCA CTATCAGATGATGACGAAAGGGCAAAAATTTTAGAAAGGATCCATTCATTGTTCAAAATT CTTGTGAAGAACCATAATCTTTCAGTGTGCAATCTAAACAGGGTGATTCGATTTGCTGTA GAGGAACTCAGGGGGTTGTCATCTGGGTCACTACTGCTTAATCACTCATTGGACAAGTCG CCGCTTTGCATTTGCTTCTTGGAGGCATCGTCACTGTGGAAAGTAGCTAAATTCTTGCAG GATTTAGTGCAGGCCTCTGGAATTAATAGAAACCTGGAGAATGATGGACTAGGTGACAGG GATAGTTCCCCCCAAAACCACAATGTACTGGAGAAGGTTATTCTTAGTTCTGATTCTTCT GAACTGATCATTGATGGGCAAACTTTTGGTGGAAAGTTTGACTCTGAGAGTGTTGATACT GACACACTGTTTTCATGGTTGTACGCTGGATCCTCAATTGGTGAGCAGCTATTGGCTTGG AACCGTATGATTGACGAAAGGTCAAATCAGTGCATGGACCTTATTCGGGCACTTGGGAGG GAGTTCAACAACTTGCAAAACTCATGTGAACGGAAGCTTGAACAGCTGAGAAATGAGGAG GCTTTTATTTCTGTAGAGGACCTCTTATGCGAAGAGCAAACACGAAGGGAGCAGGTGGAG CAGTATGGGTTCCAAAGTTTTGAGGAGATCCTCAGGAAGCGGCAGGCGGAGTTGTTGGAA CGCAATACTGAGGTGCAGTCCGACAGTAACAGATCCGAGATAGATGCAATCTCAGCTGTT TTGAAGAAACTCCACACTTCACACTTCGGTTATGATGATGCCTTTTCTGGAATGGCCCCA CGCCTTTTTGACTTGGACGGGGTCGAAGATGAATGGAGGCTGCATGATTTTATACATCCA AATGATTCAATGGTACACACTGTTATATCAAAGATGAAGGAAAAAGTTACTGTGGAGATT AGCAAGATAGATGCTCAGATTATGCGAAATTTATCTGTGATGCGGCATCTAGAGCACAAG CTTGGACCTGCTTCTGCTCTTGATTATCGAATGATTCTTTTACCCCTTATGAGATCGTTC TTACAAAGCCATTTGGGAGAGCTGGTGGATAAGGATGCCAAAGAGAGATCTGATGCTGCA AGGGAAGCCTTCCTGGCTGAACTCTCCTTGGATGCTAAGAAGAATGCAAGCAAAGGGGCT GATATGAAACAATCCCATGAAAAATCAAAGGATAAAAAGAAGTTCAAGGATTCTCGAAAA TCAAAGGAGCTCAAGGATTCAAGCTGGAGCAACCAGTCTCTCATTCACCAAGACAGTACC GATGAGGGAACATCAGAGACATCTCAAATGCTTGCTGATTGTGATGATCTGTGTTGCAAA TGCTCGACAAGTGAGGATTACTTCAATGAACAAGAGGAAGAACTTAGGCATAGGGTACAA CTTGAAGCAGAGGAAAGAAAATTGGAAGAGGCTCTAGAATATCAACGGTGGATAGAGGAG GAAGCAAAGCAGAAACATCTTGCAGAACAATGTAGAAGTACACATGCATCTTCTGTTATT GGTACAGCTAGTCTTTCAAGCACTGTGAGTTTAAACAGGGATCCGGATAACCATGAAAGT GCACTCAATAACTCTTCACATACTTATCTTGAAGGCATAAAGTTTGGTGACTTTAGCTAC ACCGAGAACGAGAACAATTTCAGCCAGAAACTCAATGGAATCGAGTTCGACTCATCTGAT GCACATGCATTAACCAGCAGTGATATGAGTGTTTCTATGTTGACGTTGAAAATGAATGGG GTTTGCAATAATGCACAACCTATAAAGCCTCTTGGTAATTTTGGCACCCAAAATCCCAAG AGAAGTTCTAGTGAACCACAAAGGTATTCTCAAGGTCACTCTGCAGGAATAGAGAAGCCA AATTTTGAGAAAGTTGGCAGTGGTGCAATACCATCAACGGATGTGTGCATCGAGGATGAT TTTGATAAAAGGTTTCAAGAAGATCTTGATGAAGCAGTGCGCCAAAGCCTTGGATGCGAT GCTTATCCTGCTGGTACAGTAAGCACTTCAAATGGGACAGAAGTGTATGGGACTGGACTT AAAAATGCTGCTGGTGAATACAATTGTTTTTTGAATGTGATTATTCAGTCATTGTGGCAT ATAAGGCGGTTTCGGGACGAGTTTCTTAAAACATCATTACTGCACAAGCATGTTGAAGAT CCTTGTGCTGTCTGCGCTTTATATGGTATCTTCATTGACCTGAGCAAAGCATCCAAGGGA CAAAGAGAAGCTGTTGCACCTACTTCGTTGAGGATTGCTTTGAGCAAATCCTACCCAAAC AGCAAATTCTTTCAGGAGGGACAGATGAATGATGCATCTGAGGTACTGGGTGTAATCTTT GAGTGTTTGCATAAGTCATACACTTCTCGTACTGTCTACCATGGTGTATCCCACGAGAAA AATTCTATTGGATCATGGGATTGTGCAAATATTTCTTGCATAACACATAATCTTTTTGGG ATGGACGTATATGAACGGATGAACTGTCACAATTGTAAGATGGAGTCTAGGCAGCTCAAG TATACTTCATTTTTCCACAATATCAATGCTAGTTCACTCCGAACTGCGAAGATGATGTGT CCAGATTCTTCATTTGATGAACTTTTGAAGGTTGTTATAATGAATGATCAACTAGCTTGT GATCAAGACGTTGGCGGCTGTGGAACACCGAATCATATAGACCACATCCTTTCTAATTCC CCACATGTCTTTACTGTTGTTTTGGGATGGCAGAACAACAAAGAGAGGGTGGATGACATA TCTGCAACTTTGGCTGGTATTTCAACTGAGATAGACATTAGCATATTCTACCGTGGTCTA GATCAAGGAGGCAAACACACCCTGGGGTCAGTGGTATGGCCAAGGAGACCCTTTGTTTTG TTTTATCACATTTTTGTATGTGTGGATGGTTTTGTTGATTGTAGTTTTCTTAAACCTGTA ATTATCTTCTTCCGGTACGTGTATGCAGCAGCAAAAAATGTACAGCTGGCCTGTGCTTTT TGCAGGCCCAAACTGACTTCCGCTCAGGTCTAG

Peptide Sequence

PEP ID	Zm00001d048442_P024
PEP Infomation	pep chromosome:B73_RefGen_v4:9:156484401:156492237:-1 gene:Zm00001d048442 transcript:Zm00001d048442_T024 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase-related protein
Sequence	MRDAIAHHGEASTPLLLRAHGTVLARAASVLDDPAARARRHRAALQAAQRAVELAPDSIE LSHFHAMLLFDAATDTRAYEEVVAECERGLSIEAPSDPAPHSLRLPGPDVDQVQSELRNL IQKANLASVSTWFKTLRSAGDDKFRLIPVHRFADEPMEARLVPSAPSPRRSNEIKKATKT SEERRQEIEVRLAAMRLLQQQKEQSNGVVSATPASSQSQGDEAPSSSLSLVGGHRADRRK GGSRKATGLSASERTDQARAYWGSIPVDQRLAFLNTSISELKSHYASAIHKEKDVASAAS DVLNEVIRFANKHGNWEFMVCGRCRGQFTDVEAHRWHVMGEHVGLLSSELQEMVPQEIDA DWVEMLIGWNWSPLDATAALKLFEEDQTDNLGTDRGKESDPTDNWSNKDNPDMSESSASP HNGECNGFGVVVREGDGTWPLSDDDERAKILERIHSLFKILVKNHNLSVCNLNRVIRFAV EELRGLSSGSLLLNHSLDKSPLCICFLEASSLWKVAKFLQDLVQASGINRNLENDGLGDR DSSPQNHNVLEKVILSSDSSELIIDGQTFGGKFDSESVDTDTLFSWLYAGSSIGEQLLAW NRMIDERSNQCMDLIRALGREFNNLQNSCERKLEQLRNEEAFISVEDLLCEEQTRREQVE QYGFQSFEEILRKRQAELLERNTEVQSDSNRSEIDAISAVLKKLHTSHFGYDDAFSGMAP RLFDLDGVEDEWRLHDFIHPNDSMVHTVISKMKEKVTVEISKIDAQIMRNLSVMRHLEHK LGPASALDYRMILLPLMRSFLQSHLGELVDKDAKERSDAAREAFLAELSLDAKKNASKGA DMKQSHEKSKDKKKFKDSRKSKELKDSSWSNQSLIHQDSTDEGTSETSQMLADCDDLCCK CSTSEDYFNEQEEELRHRVQLEAEERKLEEALEYQRWIEEEAKQKHLAEQCRSTHASSVI GTASLSSTVSLNRDPDNHESALNNSSHTYLEGIKFGDFSYTENENNFSQKLNGIEFDSSD AHALTSSDMSVSMLTLKMNGVCNNAQPIKPLGNFGTQNPKRSSSEPQRYSQGHSAGIEKP NFEKVGSGAIPSTDVCIEDDFDKRFQEDLDEAVRQSLGCDAYPAGTVSTSNGTEVYGTGL KNAAGEYNCFLNVIIQSLWHIRRFRDEFLKTSLLHKHVEDPCAVCALYGIFIDLSKASKG QREAVAPTSLRIALSKSYPNSKFFQEGQMNDASEVLGVIFECLHKSYTSRTVYHGVSHEK NSIGSWDCANISCITHNLFGMDVYERMNCHNCKMESRQLKYTSFFHNINASSLRTAKMMC PDSSFDELLKVVIMNDQLACDQDVGGCGTPNHIDHILSNSPHVFTVVLGWQNNKERVDDI SATLAGISTEIDISIFYRGLDQGGKHTLGSVVWPRRPFVLFYHIFVCVDGFVDCSFLKPV IIFFRYVYAAAKNVQLACAFCRPKLTSAQV

Transcript Sequence

Transcript ID	Zm00001d048442_T024
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:156484401:156492237:-1 gene:Zm00001d048442 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase-related protein
Sequence	GCCGGCCGGCGGGGGCTAAGGTGGCTGGCAACGGCGGGGAAGATGATGGCGTGCGCGCCG AGGTCGAAAAGGCACTCGCCTGCCTGCAGCGGGGGAACCACGCGCGGGCGGTGCGCCTCA TGAGGGACGCCATCGCCCACCACGGGGAGGCCTCCACGCCGCTTCTCCTGCGGGCGCATG GTACTGTCCTCGCCCGCGCCGCCTCCGTCCTTGACGACCCGGCCGCCCGCGCGCGCCGCC ACCGGGCAGCGCTCCAGGCGGCCCAGCGCGCCGTCGAGCTCGCGCCGGACTCCATCGAGC TCTCCCACTTTCATGCCATGCTGCTCTTCGACGCCGCCACCGACACCCGCGCCTACGAGG AGGTCGTCGCCGAGTGCGAGCGCGGCCTCAGCATCGAGGCCCCTTCCGACCCCGCGCCCC ACTCCCTCAGGCTGCCCGGCCCCGACGTCGACCAGGTCCAGTCCGAGCTCCGCAACCTGA TCCAGAAGGCCAATCTCGCCTCAGTATCTACCTGGTTTAAAACCCTGCGTAGCGCGGGCG ACGATAAGTTTCGCCTCATCCCCGTGCACCGTTTTGCCGACGAACCAATGGAGGCCCGGC TCGTCCCCTCGGCGCCCTCTCCGCGCCGCTCAAACGAGATCAAGAAGGCGACCAAGACCT CCGAGGAGCGCCGCCAGGAGATCGAGGTACGCCTGGCTGCCATGAGGCTGCTGCAGCAGC AGAAGGAGCAGAGCAATGGTGTTGTGTCTGCCACCCCTGCCTCTTCCCAGTCACAGGGAG ATGAGGCCCCCTCATCGTCTCTGTCATTGGTGGGTGGACATCGAGCTGACAGGAGAAAAG GCGGGTCTAGGAAAGCAACAGGCTTATCTGCATCTGAACGCACTGACCAGGCGCGTGCCT ACTGGGGTTCGATACCAGTGGATCAAAGGCTTGCGTTCTTAAACACTAGCATTTCTGAGC TCAAGTCACACTATGCTTCTGCAATCCATAAGGAGAAAGATGTTGCCAGTGCAGCATCTG ATGTGCTGAATGAGGTGATACGATTTGCCAACAAGCATGGCAACTGGGAGTTCATGGTAT GTGGTAGGTGTCGGGGACAGTTTACAGATGTTGAGGCACACCGGTGGCATGTCATGGGGG AACATGTTGGGCTACTCTCATCTGAGCTGCAGGAAATGGTGCCGCAGGAGATTGATGCTG ACTGGGTAGAAATGCTCATTGGTTGGAACTGGAGTCCATTGGATGCTACTGCAGCACTGA AACTGTTTGAGGAAGATCAAACTGACAATCTTGGAACAGATAGGGGCAAAGAATCGGATC CGACGGATAATTGGAGTAACAAAGACAACCCTGACATGTCAGAATCCTCTGCCTCGCCAC ACAACGGGGAGTGTAATGGCTTTGGAGTGGTGGTGAGGGAAGGTGACGGTACGTGGCCAC TATCAGATGATGACGAAAGGGCAAAAATTTTAGAAAGGATCCATTCATTGTTCAAAATTC TTGTGAAGAACCATAATCTTTCAGTGTGCAATCTAAACAGGGTGATTCGATTTGCTGTAG AGGAACTCAGGGGGTTGTCATCTGGGTCACTACTGCTTAATCACTCATTGGACAAGTCGC CGCTTTGCATTTGCTTCTTGGAGGCATCGTCACTGTGGAAAGTAGCTAAATTCTTGCAGG ATTTAGTGCAGGCCTCTGGAATTAATAGAAACCTGGAGAATGATGGACTAGGTGACAGGG ATAGTTCCCCCCAAAACCACAATGTACTGGAGAAGGTTATTCTTAGTTCTGATTCTTCTG AACTGATCATTGATGGGCAAACTTTTGGTGGAAAGTTTGACTCTGAGAGTGTTGATACTG ACACACTGTTTTCATGGTTGTACGCTGGATCCTCAATTGGTGAGCAGCTATTGGCTTGGA ACCGTATGATTGACGAAAGGTCAAATCAGTGCATGGACCTTATTCGGGCACTTGGGAGGG AGTTCAACAACTTGCAAAACTCATGTGAACGGAAGCTTGAACAGCTGAGAAATGAGGAGG CTTTTATTTCTGTAGAGGACCTCTTATGCGAAGAGCAAACACGAAGGGAGCAGGTGGAGC AGTATGGGTTCCAAAGTTTTGAGGAGATCCTCAGGAAGCGGCAGGCGGAGTTGTTGGAAC GCAATACTGAGGTGCAGTCCGACAGTAACAGATCCGAGATAGATGCAATCTCAGCTGTTT TGAAGAAACTCCACACTTCACACTTCGGTTATGATGATGCCTTTTCTGGAATGGCCCCAC GCCTTTTTGACTTGGACGGGGTCGAAGATGAATGGAGGCTGCATGATTTTATACATCCAA ATGATTCAATGGTACACACTGTTATATCAAAGATGAAGGAAAAAGTTACTGTGGAGATTA GCAAGATAGATGCTCAGATTATGCGAAATTTATCTGTGATGCGGCATCTAGAGCACAAGC TTGGACCTGCTTCTGCTCTTGATTATCGAATGATTCTTTTACCCCTTATGAGATCGTTCT TACAAAGCCATTTGGGAGAGCTGGTGGATAAGGATGCCAAAGAGAGATCTGATGCTGCAA GGGAAGCCTTCCTGGCTGAACTCTCCTTGGATGCTAAGAAGAATGCAAGCAAAGGGGCTG ATATGAAACAATCCCATGAAAAATCAAAGGATAAAAAGAAGTTCAAGGATTCTCGAAAAT CAAAGGAGCTCAAGGATTCAAGCTGGAGCAACCAGTCTCTCATTCACCAAGACAGTACCG ATGAGGGAACATCAGAGACATCTCAAATGCTTGCTGATTGTGATGATCTGTGTTGCAAAT GCTCGACAAGTGAGGATTACTTCAATGAACAAGAGGAAGAACTTAGGCATAGGGTACAAC TTGAAGCAGAGGAAAGAAAATTGGAAGAGGCTCTAGAATATCAACGGTGGATAGAGGAGG AAGCAAAGCAGAAACATCTTGCAGAACAATGTAGAAGTACACATGCATCTTCTGTTATTG GTACAGCTAGTCTTTCAAGCACTGTGAGTTTAAACAGGGATCCGGATAACCATGAAAGTG CACTCAATAACTCTTCACATACTTATCTTGAAGGCATAAAGTTTGGTGACTTTAGCTACA CCGAGAACGAGAACAATTTCAGCCAGAAACTCAATGGAATCGAGTTCGACTCATCTGATG CACATGCATTAACCAGCAGTGATATGAGTGTTTCTATGTTGACGTTGAAAATGAATGGGG TTTGCAATAATGCACAACCTATAAAGCCTCTTGGTAATTTTGGCACCCAAAATCCCAAGA GAAGTTCTAGTGAACCACAAAGGTATTCTCAAGGTCACTCTGCAGGAATAGAGAAGCCAA ATTTTGAGAAAGTTGGCAGTGGTGCAATACCATCAACGGATGTGTGCATCGAGGATGATT TTGATAAAAGGTTTCAAGAAGATCTTGATGAAGCAGTGCGCCAAAGCCTTGGATGCGATG CTTATCCTGCTGGTACAGTAAGCACTTCAAATGGGACAGAAGTGTATGGGACTGGACTTA AAAATGCTGCTGGTGAATACAATTGTTTTTTGAATGTGATTATTCAGTCATTGTGGCATA TAAGGCGGTTTCGGGACGAGTTTCTTAAAACATCATTACTGCACAAGCATGTTGAAGATC CTTGTGCTGTCTGCGCTTTATATGGTATCTTCATTGACCTGAGCAAAGCATCCAAGGGAC AAAGAGAAGCTGTTGCACCTACTTCGTTGAGGATTGCTTTGAGCAAATCCTACCCAAACA GCAAATTCTTTCAGGAGGGACAGATGAATGATGCATCTGAGGTACTGGGTGTAATCTTTG AGTGTTTGCATAAGTCATACACTTCTCGTACTGTCTACCATGGTGTATCCCACGAGAAAA ATTCTATTGGATCATGGGATTGTGCAAATATTTCTTGCATAACACATAATCTTTTTGGGA TGGACGTATATGAACGGATGAACTGTCACAATTGTAAGATGGAGTCTAGGCAGCTCAAGT ATACTTCATTTTTCCACAATATCAATGCTAGTTCACTCCGAACTGCGAAGATGATGTGTC CAGATTCTTCATTTGATGAACTTTTGAAGGTTGTTATAATGAATGATCAACTAGCTTGTG ATCAAGACGTTGGCGGCTGTGGAACACCGAATCATATAGACCACATCCTTTCTAATTCCC CACATGTCTTTACTGTTGTTTTGGGATGGCAGAACAACAAAGAGAGGGTGGATGACATAT CTGCAACTTTGGCTGGTATTTCAACTGAGATAGACATTAGCATATTCTACCGTGGTCTAG ATCAAGGAGGCAAACACACCCTGGGGTCAGTGGTATGGCCAAGGAGACCCTTTGTTTTGT TTTATCACATTTTTGTATGTGTGGATGGTTTTGTTGATTGTAGTTTTCTTAAACCTGTAA TTATCTTCTTCCGGTACGTGTATGCAGCAGCAAAAAATGTACAGCTGGCCTGTGCTTTTT GCAGGCCCAAACTGACTTCCGCTCAGGTCTAGGGAGCTACCAAAATAACTCCAGTTTGAG AATAAGATGATGTCTCCTCCTCGGGATACTATTTGTTTATTTTTTAGGGAGGTCATTGTG CTGTCACTTGTTGGTATTAGATGTGTTATCAACTGATTTGGGAGCTTGCTTTCAGCAATT ACGTAAACTGGGAGCTGATATGATATGAAGTAGGTTGAATATATTTAAG