Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048439_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:9:156420521:156423683:-1 gene:Zm00001d048439 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF593 domain containing family protein

Sequence

ATGGCTGTGCAAGCCCATTCAAGGCCACAGAATGTTTCGCGGCAATTATGGCCCGTGCTT
CACCATGCCGTCAGCGAGTGCTGCTTGATCATAATGCTCGTTACGACTGCTGTGTTGTCA
TACATGGCCACAAGGTTCGCACGCATGTGCAGCCTCCGGTCACCATGTATGTTATGTTCG
AGGTTGGATCAATTTCTACATGGCAAGGCATGGTTCTCTGAAGAACTAGTTTGTGCTACA
CACAGGATAGAAATATCACGTTTGTCATATTGCCAGAGTCACAACAAGCTTGAGCGCTCT
GATGATATGTGTGATAAGTGCATGCTTTCTTGCATGACCTCAAGTGGCAAGACCTATAAC
CTGACAAACATGCATGGTAGGGATAAGGTGAAGTCTCGGTCGAGATCTAGGCACAAACAC
ATGTGCTCCTGTTGTTCGATGCAGTTCAAGAAGAAACGAGATTCACATATGCTACCTGAC
ATAACAAATAGCTGGTTTCCAGGTGACGATATGAGCAAATTAAAACAAAGAAACATAGTC
ATGTCAAGTGTTGGGTATTCTTCAAATGACGACTATGATCACTTGCCTTATGAAGGATAT
AGAAAACTAAAGCTTGGCCATGAATCTGAATATGATATTCACATCTCAAATAGTGATAAT
GACGAGAGAAATGCAGTATCTCATGAAGCTAGAGAAAGAGCCAATCACATGCCTAGTCAT
GATGCACTGCTGCAACCAATGATCTCTAATGCCAGCGGCTTGTTGATGCCTTCTTTTGAT
AATACTATTATGACAAAGGCCACACAACCACTGAATAATGTGAGAGATACTGACACTCAC
TCTAGTGATACCAAGGATGCAAATTCTTTGGATCATGCTATTGGGCTTGTTTTGGATGAT
ATCAGCTGGAGTCAAATCAATACAAGTGACAAAAATATTGACGTACAGTCGAAGGCTATC
CCTGAAGAAGTTTTAGCAGAGCTCCCAAAAGAGAAAAATTTTCTTATTGGTACTGAAGAA
GTTGGTGATTCTTTTGAGGATATTTCAGGAAGCCCTGGTGTTGAAGCTGCAAAGGATTTT
AATGCTTCTGCAAATGCTGGAACAAGATCAAGTGTAGACACTCATATTAGCTGGAACAAC
AGCCCAAAAATTGCTTCTGCATGTAGAGGCTATTATAAATCTCCTCGTTTGTCTGAAATA
ATCTCAGCCCGGGACACCAATTCAAAAACAAATGAAGAAGTCAAGACATTTCTATCACAA
TTGTCTACTGCACGGGGATTTGATAGCTCTTTGAATGAGATGACACCTAGAAGTAGCACA
CATATTGATGACTACCGACAACATGATGCTACTGGTATGACACCATTTCTTGATAGGAAC
AACTCAAATCTAGATTCATTTGATGCCAACACAACTAGTGAAGATGAAGGTGAAAGTTCT
TTGGAACACTTGAAGAAGCAGGCTAAGTTTAACAAGAAAAAAATGGGTATGCTTTATAAG
GAGCTCGAGGCAGAACGAAGTGCTTCAGCGGTGGCAGTAAGTGAAGCAATGGCTATGATC
AACAGGTTGCAAGAGGAAAAGGCTTCAATGCACATGGAAGCACTGCAGTATCTTCGGATG
ATGGAAGAGCAGGCTGATCATGACCAGGAAGCAATTGAAAAGCTAAATGACTTGCTAACA
GAAAGGGAGAAAGAATTACTTGACCTAGAAGCTGAACTTGAGGGTTACCGGAGCAAGCTT
CATGATCAACCATTTGATGTTGGAAAATTTGGTGCTACTGATGGAGCTATGGCATTCAGA
GTCTTGGAAGGCTCAGATTTCATGAGGCATACCATATTTGATTTTGAAGATGAAAAGGCA
AAGATTTTGGAGTCCTTGCACAGATTGGAGGAAATCCTAGGCATGCCCAGCATTGACATG
GGTGATGCAAATGATTCTCTACAGAACAGTCTACTGAGTGATCAGTCAATGCACATTAGC
CAGGATATAGAAAATTCAGAGTTGGAAAGTTTATCGTTGCCTCGAGAGGACATGATTAGT
GAATCAATTTCTTCACAGTGCTATGATGAGCAGGAATCTGTTAAATACATGCATAAGCAC
ATGCACAATCACGAACAAGATGATAATGAATCCGTTGATAAGCAACAAAAGAATGTAACT
TCATGTTCCCACTCAGATGATGGAAATATTCATACTATGAAAAGTGTTAAACATGAAATT
TCTCTCCTTAATGCAAGATTCAAGGCACTTGAAGCAGATCAGGATTTTCTCAAGCAAATC
CTAAGATCTCTTAATGTTAGCAGTGATGGAGTAGAATGTATCCAGGAGATAACAAGCCAT
TTGCGAGAGCTGCGAAGAATCATGGCAGACCAAAGGGACATGACAGTTTTTATGAGGTCA
TGA

Peptide Sequence

PEP ID

Zm00001d048439_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:9:156420521:156423683:-1 gene:Zm00001d048439 transcript:Zm00001d048439_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF593 domain containing family protein

Sequence

MAVQAHSRPQNVSRQLWPVLHHAVSECCLIIMLVTTAVLSYMATRFARMCSLRSPCMLCS
RLDQFLHGKAWFSEELVCATHRIEISRLSYCQSHNKLERSDDMCDKCMLSCMTSSGKTYN
LTNMHGRDKVKSRSRSRHKHMCSCCSMQFKKKRDSHMLPDITNSWFPGDDMSKLKQRNIV
MSSVGYSSNDDYDHLPYEGYRKLKLGHESEYDIHISNSDNDERNAVSHEARERANHMPSH
DALLQPMISNASGLLMPSFDNTIMTKATQPLNNVRDTDTHSSDTKDANSLDHAIGLVLDD
ISWSQINTSDKNIDVQSKAIPEEVLAELPKEKNFLIGTEEVGDSFEDISGSPGVEAAKDF
NASANAGTRSSVDTHISWNNSPKIASACRGYYKSPRLSEIISARDTNSKTNEEVKTFLSQ
LSTARGFDSSLNEMTPRSSTHIDDYRQHDATGMTPFLDRNNSNLDSFDANTTSEDEGESS
LEHLKKQAKFNKKKMGMLYKELEAERSASAVAVSEAMAMINRLQEEKASMHMEALQYLRM
MEEQADHDQEAIEKLNDLLTEREKELLDLEAELEGYRSKLHDQPFDVGKFGATDGAMAFR
VLEGSDFMRHTIFDFEDEKAKILESLHRLEEILGMPSIDMGDANDSLQNSLLSDQSMHIS
QDIENSELESLSLPREDMISESISSQCYDEQESVKYMHKHMHNHEQDDNESVDKQQKNVT
SCSHSDDGNIHTMKSVKHEISLLNARFKALEADQDFLKQILRSLNVSSDGVECIQEITSH
LRELRRIMADQRDMTVFMRS

Transcript Sequence

Transcript ID

Zm00001d048439_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:156420521:156423683:-1 gene:Zm00001d048439 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative DUF593 domain containing family protein

Sequence

GGGGTTTAGGGAGGAGACGGCGGGCATCTGCCCCCTCTCGAATCCTACACCGAGAGAGGG
GGAACTATTTTGCCTCCTCTTTGTAGCCAGAAACTATCCCCCAATTTCTCGAGATTTTTT
TCAGCGCATTTCTGGACCTTTTGGTTGAATCCACTATATCGCTCTCGTCCTTTGCCTCCA
CCATGTTGCCAAATCGGTGATTTAGGGACATCCAACTTTTTGATCGGAGATCTGCAACGT
TGGAAACATCGAGTTATGTGATCAATTGGAGACCTATTTGTTTGACCCTAGCACGCAATT
CTGAGAAACATGATTTTGTAGCGACCTACATGTGAATTGGGGTGTGTTCAGCTTCCCATG
GCTGTGCAAGCCCATTCAAGGCCACAGAATGTTTCGCGGCAATTATGGCCCGTGCTTCAC
CATGCCGTCAGCGAGTGCTGCTTGATCATAATGCTCGTTACGACTGCTGTGTTGTCATAC
ATGGCCACAAGGTTCGCACGCATGTGCAGCCTCCGGTCACCATGTATGTTATGTTCGAGG
TTGGATCAATTTCTACATGGCAAGGCATGGTTCTCTGAAGAACTAGTTTGTGCTACACAC
AGGATAGAAATATCACGTTTGTCATATTGCCAGAGTCACAACAAGCTTGAGCGCTCTGAT
GATATGTGTGATAAGTGCATGCTTTCTTGCATGACCTCAAGTGGCAAGACCTATAACCTG
ACAAACATGCATGGTAGGGATAAGGTGAAGTCTCGGTCGAGATCTAGGCACAAACACATG
TGCTCCTGTTGTTCGATGCAGTTCAAGAAGAAACGAGATTCACATATGCTACCTGACATA
ACAAATAGCTGGTTTCCAGGTGACGATATGAGCAAATTAAAACAAAGAAACATAGTCATG
TCAAGTGTTGGGTATTCTTCAAATGACGACTATGATCACTTGCCTTATGAAGGATATAGA
AAACTAAAGCTTGGCCATGAATCTGAATATGATATTCACATCTCAAATAGTGATAATGAC
GAGAGAAATGCAGTATCTCATGAAGCTAGAGAAAGAGCCAATCACATGCCTAGTCATGAT
GCACTGCTGCAACCAATGATCTCTAATGCCAGCGGCTTGTTGATGCCTTCTTTTGATAAT
ACTATTATGACAAAGGCCACACAACCACTGAATAATGTGAGAGATACTGACACTCACTCT
AGTGATACCAAGGATGCAAATTCTTTGGATCATGCTATTGGGCTTGTTTTGGATGATATC
AGCTGGAGTCAAATCAATACAAGTGACAAAAATATTGACGTACAGTCGAAGGCTATCCCT
GAAGAAGTTTTAGCAGAGCTCCCAAAAGAGAAAAATTTTCTTATTGGTACTGAAGAAGTT
GGTGATTCTTTTGAGGATATTTCAGGAAGCCCTGGTGTTGAAGCTGCAAAGGATTTTAAT
GCTTCTGCAAATGCTGGAACAAGATCAAGTGTAGACACTCATATTAGCTGGAACAACAGC
CCAAAAATTGCTTCTGCATGTAGAGGCTATTATAAATCTCCTCGTTTGTCTGAAATAATC
TCAGCCCGGGACACCAATTCAAAAACAAATGAAGAAGTCAAGACATTTCTATCACAATTG
TCTACTGCACGGGGATTTGATAGCTCTTTGAATGAGATGACACCTAGAAGTAGCACACAT
ATTGATGACTACCGACAACATGATGCTACTGGTATGACACCATTTCTTGATAGGAACAAC
TCAAATCTAGATTCATTTGATGCCAACACAACTAGTGAAGATGAAGGTGAAAGTTCTTTG
GAACACTTGAAGAAGCAGGCTAAGTTTAACAAGAAAAAAATGGGTATGCTTTATAAGGAG
CTCGAGGCAGAACGAAGTGCTTCAGCGGTGGCAGTAAGTGAAGCAATGGCTATGATCAAC
AGGTTGCAAGAGGAAAAGGCTTCAATGCACATGGAAGCACTGCAGTATCTTCGGATGATG
GAAGAGCAGGCTGATCATGACCAGGAAGCAATTGAAAAGCTAAATGACTTGCTAACAGAA
AGGGAGAAAGAATTACTTGACCTAGAAGCTGAACTTGAGGGTTACCGGAGCAAGCTTCAT
GATCAACCATTTGATGTTGGAAAATTTGGTGCTACTGATGGAGCTATGGCATTCAGAGTC
TTGGAAGGCTCAGATTTCATGAGGCATACCATATTTGATTTTGAAGATGAAAAGGCAAAG
ATTTTGGAGTCCTTGCACAGATTGGAGGAAATCCTAGGCATGCCCAGCATTGACATGGGT
GATGCAAATGATTCTCTACAGAACAGTCTACTGAGTGATCAGTCAATGCACATTAGCCAG
GATATAGAAAATTCAGAGTTGGAAAGTTTATCGTTGCCTCGAGAGGACATGATTAGTGAA
TCAATTTCTTCACAGTGCTATGATGAGCAGGAATCTGTTAAATACATGCATAAGCACATG
CACAATCACGAACAAGATGATAATGAATCCGTTGATAAGCAACAAAAGAATGTAACTTCA
TGTTCCCACTCAGATGATGGAAATATTCATACTATGAAAAGTGTTAAACATGAAATTTCT
CTCCTTAATGCAAGATTCAAGGCACTTGAAGCAGATCAGGATTTTCTCAAGCAAATCCTA
AGATCTCTTAATGTTAGCAGTGATGGAGTAGAATGTATCCAGGAGATAACAAGCCATTTG
CGAGAGCTGCGAAGAATCATGGCAGACCAAAGGGACATGACAGTTTTTATGAGGTCATGA