Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048432_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:9:156173446:156177380:-1 gene:Zm00001d048432 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable RNA helicase SDE3
Sequence	ATGGGTCATCGTAGGAATTATTCTGACGACGAATTTTCAGTTGCTAGCGAGAAGCCAGAA GTAGAATTCATGGACTTCCAGAACGGTGACACTTTTCAGGATTATTCATCTGAAGATACC CCTGTGCTCGTCTCAGCTCCTTTCCCTTTCGAGCATGGAAAACCAAAATCTGTACTTGTT GGAGAAACATCGGCTGATACTATTCAGATTGAGAATACCTCTCCTGAACCTGTAAATTTG TGGAGTGTAAGAATTTTCTCCTCAAATCCAGAAGACAGCTACGTGTTATCGATGATGAGA CCTCCATCAAATGGTGCTAGCGAAGAGGAAAAGCAGGCTTTTCTTGCTTTGACATCGGTG GAAGACCGTACACTTCGGCCTGGACAAACCCTCACAGTTTGGCTGTCTTGTACGCCAAAA GATATTGGTTTGCATACATCAATCGTGCATGTTGATATCGGCAATGAGAAGATTGAGCGT GTGGCTTTTCTTTTGGCAGATGACAATGTCTCCAAGTCATTATTTTCTGATAAGCCTTAT TCTAGGAGACGTGTTCAAGTTAAGAAATTTGAGCCTTCACCATTTGTGCCAGGTTGCCGT CCAACTCAGCAGCATGTTCAAGGATACAAACATAAGCTTCCTCAGTATGCAATACCTGCA CATATCCGTGAGCTCATTGAAAGTAAACAGACACCTGATGTCCTATATGATGAGTTGAGC ATGATAAACTATGCAGAATATTTCAGCACTCTTATAGTCATGGAAGAACTCAATTTGCAG GAGGAAATGAGAGCATATGACATGGAGGGTGTCTTAATGAGAAGGAGGGGTATGCACTTT TTGTCTCTTGAAGTCCCTGGTTTGGCAGAAAGAAGGCCATCACTAGTCCAAGGAGACTTC ATATTCGCTAGATATGCTGGGAATGATTCTCAGCCTTACCAGGGTTTCATTCACAAGGTT GAAGCTGATGAGATATTTTTAAAATTTGATCATCAGTTCCACATGAATCACAGAGAAAGA AACCAGTACCATGTTAGCTTCACATATAACAGAGTGAACATGAGAAGGCTTTACAAATCA ATTGATGATGCAAAATATTTGGGACCTGGCATCTTGTTTCCCCACAAATCACCTTATAGA GTTTTGAAAAGGTTGCCATTTAAGCCTCTCGATCCATATATAAATACTGAGCAAGCTGAT GCTGTTGCGAGCATACTTGCCTGCAGAGGAGTTCCACCATATGTGATATATGGACCTCCA GGAACTGGCAAGACCATGACCATTGTAGAGGCTGTTTTGCAGCTTTATACGGGCAAGAAG AGGGCAAATATTCTCATTTGTGCTGCTTCCAATACTGCAGCTGATCATGTATTGGAAAAG CTCCTTCAAGGCAGCCATCCGATCCGTCCAAGAGATATCTTTAGGCTAAATGCTCCAAGC CGTCAATACGAGGATGTCAATACCGATTTTATCAAGTTTTGCTTCTTCCAAGATCTGGTG TTCAAGTGCCCTCCGTTACAAGCACTGGTGCAGTACAAGATAATTATATCGACCTATACA AGTTCATATCTGCTGCAGGCTGAGGGCATTCGCCAAGGGCATTTCACACACATTTTCTTG GATGAGGCTGGTCAAGCCTCTGAACCAGAGGCGATGGTTCCTTTGTCGGGGTTGTGTGGA AGAGACACTGTGGTTGTGTTAGCAGGAGATCCAAAGCAATTAGGGCCGGTGGTTTATTGC AGGGAAGCGGAGAGATGTGGTCTGGGGACATCATATCTGGAAAGGCTGCTAACTGGCTTC GAGCAGTACCAAACAGGGAATGCTAACTATGTGACAAAGCTGGTGAGGAATTATCGGTGC CATCCTGCAATCCTAGAGCTACCATCAGAGCTTTTCTACGAGGGTGAATTGATTGCCTGT AAAGAAGGAGAATCATCTGCTTACGACTGCATCGGCCTTCCTAACAAGTCGTTCCCTGTT CTCTTCGTCGGGATTCAAGGATGCGACGAGAGGGAAGGCAACAATCCATCATGGTTCAAC AGGATTGAAGTTAGTAAAGTAGTATCTATCATCAGGAACCTGACAAGGGGTGAGGATGTT CATGAATCTGATATAGGAGTGATCACTCCATATCGTCAGCAAGTTGCCAAGATAAAGAAA GCCCTGGAGGCATTTGAAATGCCCAGCTTCAAAGTCGGAAGCGTCGAGCAATTCCAGGGC CAAGAGAGGGAGGTGATAATCATCTCCACAGTCAGGTCGACCGTAAAGCACAACGAGTTT GACAAATTTTTTAACCTGGGATTCTTGAGCAACCATAGAAGGTTCAACGTTGCCATCACT CGCGCAAAATCGCTGCTCGTCATCATCGGAAACCCTTACATTATCTTCAGGACCGTCACT GGGATAGGCTCCTGCGGTACTGCGCTGACAACGGCTCCTATCAAGGATGCCCCCTTCCAC CACCAGAGTCTCCTTATTCAGACGACGCCAGATTCTTTTCCAAGTACGACGAAGACCAAG GTGGACCTTCTGGGCAGGATGCAACTACAACCAAGAGCCTGCCTACTGCAACTACGACGA CCAAGAGCCTTCTGA

Peptide Sequence

PEP ID	Zm00001d048432_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:9:156173446:156177380:-1 gene:Zm00001d048432 transcript:Zm00001d048432_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable RNA helicase SDE3
Sequence	MGHRRNYSDDEFSVASEKPEVEFMDFQNGDTFQDYSSEDTPVLVSAPFPFEHGKPKSVLV GETSADTIQIENTSPEPVNLWSVRIFSSNPEDSYVLSMMRPPSNGASEEEKQAFLALTSV EDRTLRPGQTLTVWLSCTPKDIGLHTSIVHVDIGNEKIERVAFLLADDNVSKSLFSDKPY SRRRVQVKKFEPSPFVPGCRPTQQHVQGYKHKLPQYAIPAHIRELIESKQTPDVLYDELS MINYAEYFSTLIVMEELNLQEEMRAYDMEGVLMRRRGMHFLSLEVPGLAERRPSLVQGDF IFARYAGNDSQPYQGFIHKVEADEIFLKFDHQFHMNHRERNQYHVSFTYNRVNMRRLYKS IDDAKYLGPGILFPHKSPYRVLKRLPFKPLDPYINTEQADAVASILACRGVPPYVIYGPP GTGKTMTIVEAVLQLYTGKKRANILICAASNTAADHVLEKLLQGSHPIRPRDIFRLNAPS RQYEDVNTDFIKFCFFQDLVFKCPPLQALVQYKIIISTYTSSYLLQAEGIRQGHFTHIFL DEAGQASEPEAMVPLSGLCGRDTVVVLAGDPKQLGPVVYCREAERCGLGTSYLERLLTGF EQYQTGNANYVTKLVRNYRCHPAILELPSELFYEGELIACKEGESSAYDCIGLPNKSFPV LFVGIQGCDEREGNNPSWFNRIEVSKVVSIIRNLTRGEDVHESDIGVITPYRQQVAKIKK ALEAFEMPSFKVGSVEQFQGQEREVIIISTVRSTVKHNEFDKFFNLGFLSNHRRFNVAIT RAKSLLVIIGNPYIIFRTVTGIGSCGTALTTAPIKDAPFHHQSLLIQTTPDSFPSTTKTK VDLLGRMQLQPRACLLQLRRPRAF

Transcript Sequence

Transcript ID	Zm00001d048432_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:156173446:156177380:-1 gene:Zm00001d048432 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable RNA helicase SDE3
Sequence	ATCAATGCGGCATTGCAGTTAGCCCCTGCCGTTTTCTTCTCCCGTAGTCCCGTCCCACCG GCCCCCCTCCGCCGCCTCCACACGCCAGGTGTAGCCTCGTCGATCCCTTCGCCGGCGAAG AGCCCCTACTAGGTATGCCCCCTCCCCCTTCCTCCTCTCCCCTTCCTCCCTGCTGTGCGA AACTGGGCTCCCGAACCGTAACCCTGAACTATCTGGGTATGTGTATTCGGATCTGATCTA ATACAAGTGTATCTTTATGTCTTTGACTGGGTCTGCCCCTGATTCATCTGGACTACGTAG CGTGATTACTCCAGCTTTGAGATGCCTAATTTTTATAACTGCTGCGTCATATAAGTCGTG TGCAAAGAAGGGAAGTGGAGTAATGCAGTGCCAAAACGCTTCTGTGAATAGTTTGGTGTG AAGGGGAAATCTTTATGTAGACTCAACAAAACAGCAACTCTTATTAAGACGCATAGTCCT GGGAACTGCAGTGGCTTGGCGGTTGCCACATGCTGTGAGTGTGTCATGCCTACTTCATAT AGTTGGTTATACCGTTACAGTGTATCTGGTATCTGGTGTGTGGTCGTAAGATTTGTTTCT TTGTCATAGTTGTAGATGGTCGTAGTAATACCATGCTTATGATGTTTTCTTGTTTCAGAC CTAACTTTAAATGCTAACAGAACTTTTTTTATATACAAAAAAAAGCAATTGATACAACAT TTATACTTCCAGGATTCAAGATGGGTCATCGTAGGAATTATTCTGACGACGAATTTTCAG TTGCTAGCGAGAAGCCAGAAGTAGAATTCATGGACTTCCAGAACGGTGACACTTTTCAGG ATTATTCATCTGAAGATACCCCTGTGCTCGTCTCAGCTCCTTTCCCTTTCGAGCATGGAA AACCAAAATCTGTACTTGTTGGAGAAACATCGGCTGATACTATTCAGATTGAGAATACCT CTCCTGAACCTGTAAATTTGTGGAGTGTAAGAATTTTCTCCTCAAATCCAGAAGACAGCT ACGTGTTATCGATGATGAGACCTCCATCAAATGGTGCTAGCGAAGAGGAAAAGCAGGCTT TTCTTGCTTTGACATCGGTGGAAGACCGTACACTTCGGCCTGGACAAACCCTCACAGTTT GGCTGTCTTGTACGCCAAAAGATATTGGTTTGCATACATCAATCGTGCATGTTGATATCG GCAATGAGAAGATTGAGCGTGTGGCTTTTCTTTTGGCAGATGACAATGTCTCCAAGTCAT TATTTTCTGATAAGCCTTATTCTAGGAGACGTGTTCAAGTTAAGAAATTTGAGCCTTCAC CATTTGTGCCAGGTTGCCGTCCAACTCAGCAGCATGTTCAAGGATACAAACATAAGCTTC CTCAGTATGCAATACCTGCACATATCCGTGAGCTCATTGAAAGTAAACAGACACCTGATG TCCTATATGATGAGTTGAGCATGATAAACTATGCAGAATATTTCAGCACTCTTATAGTCA TGGAAGAACTCAATTTGCAGGAGGAAATGAGAGCATATGACATGGAGGGTGTCTTAATGA GAAGGAGGGGTATGCACTTTTTGTCTCTTGAAGTCCCTGGTTTGGCAGAAAGAAGGCCAT CACTAGTCCAAGGAGACTTCATATTCGCTAGATATGCTGGGAATGATTCTCAGCCTTACC AGGGTTTCATTCACAAGGTTGAAGCTGATGAGATATTTTTAAAATTTGATCATCAGTTCC ACATGAATCACAGAGAAAGAAACCAGTACCATGTTAGCTTCACATATAACAGAGTGAACA TGAGAAGGCTTTACAAATCAATTGATGATGCAAAATATTTGGGACCTGGCATCTTGTTTC CCCACAAATCACCTTATAGAGTTTTGAAAAGGTTGCCATTTAAGCCTCTCGATCCATATA TAAATACTGAGCAAGCTGATGCTGTTGCGAGCATACTTGCCTGCAGAGGAGTTCCACCAT ATGTGATATATGGACCTCCAGGAACTGGCAAGACCATGACCATTGTAGAGGCTGTTTTGC AGCTTTATACGGGCAAGAAGAGGGCAAATATTCTCATTTGTGCTGCTTCCAATACTGCAG CTGATCATGTATTGGAAAAGCTCCTTCAAGGCAGCCATCCGATCCGTCCAAGAGATATCT TTAGGCTAAATGCTCCAAGCCGTCAATACGAGGATGTCAATACCGATTTTATCAAGTTTT GCTTCTTCCAAGATCTGGTGTTCAAGTGCCCTCCGTTACAAGCACTGGTGCAGTACAAGA TAATTATATCGACCTATACAAGTTCATATCTGCTGCAGGCTGAGGGCATTCGCCAAGGGC ATTTCACACACATTTTCTTGGATGAGGCTGGTCAAGCCTCTGAACCAGAGGCGATGGTTC CTTTGTCGGGGTTGTGTGGAAGAGACACTGTGGTTGTGTTAGCAGGAGATCCAAAGCAAT TAGGGCCGGTGGTTTATTGCAGGGAAGCGGAGAGATGTGGTCTGGGGACATCATATCTGG AAAGGCTGCTAACTGGCTTCGAGCAGTACCAAACAGGGAATGCTAACTATGTGACAAAGC TGGTGAGGAATTATCGGTGCCATCCTGCAATCCTAGAGCTACCATCAGAGCTTTTCTACG AGGGTGAATTGATTGCCTGTAAAGAAGGAGAATCATCTGCTTACGACTGCATCGGCCTTC CTAACAAGTCGTTCCCTGTTCTCTTCGTCGGGATTCAAGGATGCGACGAGAGGGAAGGCA ACAATCCATCATGGTTCAACAGGATTGAAGTTAGTAAAGTAGTATCTATCATCAGGAACC TGACAAGGGGTGAGGATGTTCATGAATCTGATATAGGAGTGATCACTCCATATCGTCAGC AAGTTGCCAAGATAAAGAAAGCCCTGGAGGCATTTGAAATGCCCAGCTTCAAAGTCGGAA GCGTCGAGCAATTCCAGGGCCAAGAGAGGGAGGTGATAATCATCTCCACAGTCAGGTCGA CCGTAAAGCACAACGAGTTTGACAAATTTTTTAACCTGGGATTCTTGAGCAACCATAGAA GGTTCAACGTTGCCATCACTCGCGCAAAATCGCTGCTCGTCATCATCGGAAACCCTTACA TTATCTTCAGGACCGTCACTGGGATAGGCTCCTGCGGTACTGCGCTGACAACGGCTCCTA TCAAGGATGCCCCCTTCCACCACCAGAGTCTCCTTATTCAGACGACGCCAGATTCTTTTC CAAGTACGACGAAGACCAAGGTGGACCTTCTGGGCAGGATGCAACTACAACCAAGAGCCT GCCTACTGCAACTACGACGACCAAGAGCCTTCTGACTTCGGTTCGGGGCATGACACTGGT GTTGCTCAACCTGAACCTGCTTCGGAGAATCAAGAGTCATGGTCCGAGGAGTTGCCTGAA GACGAGAGCCAGCCATTCAGCAACCCCCAAGCAGATGTTGAGGAGACGCCGAAGCAGGAC GGCGAGGAAGGGGCTGCAGCTGCACAGGGAGACGCGCAGGCCGACCAGTCGTTGACCAAC GACGACAGTCAGCTCCAGGACGCAGGCGCGGGGAAGTACACC