Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048409_T007
CDS Infomation

cds chromosome:B73_RefGen_v4:9:155778476:155782896:-1 gene:Zm00001d048409 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell division control protein 48 homolog D
Sequence

ATGGCGAGCCAAGGCGAGCCGTCTTCCTCCGATCCGAAGGGGAAGAAGGATTACTCTACG
GCGATCCTGGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAATGAT
GACAACTCCGTCGTCGCTCTGCACCCGGACACCATGGAGAGGCTCCAGCTCTTCCGCGGT
GACACTGTCTTGATCAAGGGTAAGAAGAGAAAGGACACTGTCTGCATTGTGCTTGCAGAT
GAGACATGTGAGGAGCCAAAGGTCCGGATGAACAAGATTGTCAGGAAGAACTTGAGGGTA
CGGCTTGGTGATGTTGTATCTGTCCATCAATGCCCAGATGTCAAATACGGGAAGCGTGTG
CACATACTTCCAATTGATGACACCATTGAAGGCATCACTGGCAATTTGTTTGATGCCTTT
CTAAAACCATACTTCCTTGAAGCCTATCGTCCTTTGAGGAAAGGAGACCTTTTCCTAGTC
AGGGGTGGCATGAGAAGTGTAGAATTCAAAGTCATAGAGACTGATCCTGCAGAGTATTGT
ATCGTTGCACCAGATACAGAAATATTTTGTGAGGGTGAGCCTATTAAGAGGGAGGACGAG
GAAAGACTCGATGAGGTTGGCTATGACGATGTTGGTGGAGTTAGAAAGCAGATGGCCCAA
ATCAGGGAACTGGTTGAACTTCCATTGCGTCATCCCCAGCTTTTCAAGTCTATTGGTGTG
AAACCACCAAAGGGCATATTGCTGTTTGGGCCTCCTGGCTCCGGCAAGACCCTTATTGCT
AGAGCTGTAGCTAATGAGACAGGTGCTTTCTTCTTTTTGATCAATGGACCAGAAATCATG
TCAAAGCTAGCAGGAGAAAGTGAAAGCAATCTCAGAAAGGCATTTGAAGAAGCTGAGAAA
AATGCACCTTCCATCATTTTTATTGATGAGATAGATTCCATAGCACCTAAGAGAGAGAAG
ACCCATGGAGAAGTTGAAAGGCGTATTGTTTCACAGCTCTTGACTCTTATGGATGGGCTC
AAGTCTCGTGCACATGTGATTGTTATGGGTGCCACCAACCGTCCAAACAGTATCGATCCT
GCTCTTAGAAGGTTTGGTAGGTTTGATCGCGAGATTGATATTGGTGTTCCAGATGAAGTT
GGCCGCCTTGAGGTTCTTCGGATTCACACGAAAAACATGAAGCTGGCTGAAGATGTTGAC
TTGGAGCTCATTGCGAAGGATACCCATGGGTATGTTGGTGCTGATCTTGCTGCCCTTTGT
ACTGAAGCTGCTCTTCAATGCATTCGTGAGAAGATGGATATTATTGACCTTGAGGATGAG
ACCATAGATGCTGAGATACTGAACTCTATGGCTGTCTCAAATGACCATTTCAAGACTGCA
CTTGGGACAAGCAACCCATCTGCTCTGCGTGAAACTGTGAATATCTCTAGGAGTACCCTC
TTCTGCAGGTTGTGA

Peptide Sequence

PEP ID

Zm00001d048409_P007
PEP Infomation

pep chromosome:B73_RefGen_v4:9:155778476:155782896:-1 gene:Zm00001d048409 transcript:Zm00001d048409_T007 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell division control protein 48 homolog D
Sequence

MASQGEPSSSDPKGKKDYSTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRG
DTVLIKGKKRKDTVCIVLADETCEEPKVRMNKIVRKNLRVRLGDVVSVHQCPDVKYGKRV
HILPIDDTIEGITGNLFDAFLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYC
IVAPDTEIFCEGEPIKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV
KPPKGILLFGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK
NAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLELIAKDTHGYVGADLAALC
TEAALQCIREKMDIIDLEDETIDAEILNSMAVSNDHFKTALGTSNPSALRETVNISRSTL
FCRL

Transcript Sequence

Transcript ID

Zm00001d048409_T007
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:155778476:155782896:-1 gene:Zm00001d048409 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell division control protein 48 homolog D
Sequence

CGCAAATATCTGTCGCCGTCTCGCCAACAGCACCAACCGCGCCTCCTCGAATTCGACCGT
CATGGCGAGCCAAGGCGAGCCGTCTTCCTCCGATCCGAAGGGGAAGAAGGATTACTCTAC
GGCGATCCTGGAGAGGAAGAAGTCGCCGAACCGGCTGGTGGTCGACGAGGCCACCAATGA
TGACAACTCCGTCGTCGCTCTGCACCCGGACACCATGGAGAGGCTCCAGCTCTTCCGCGG
TGACACTGTCTTGATCAAGGGTAAGAAGAGAAAGGACACTGTCTGCATTGTGCTTGCAGA
TGAGACATGTGAGGAGCCAAAGGTCCGGATGAACAAGATTGTCAGGAAGAACTTGAGGGT
ACGGCTTGGTGATGTTGTATCTGTCCATCAATGCCCAGATGTCAAATACGGGAAGCGTGT
GCACATACTTCCAATTGATGACACCATTGAAGGCATCACTGGCAATTTGTTTGATGCCTT
TCTAAAACCATACTTCCTTGAAGCCTATCGTCCTTTGAGGAAAGGAGACCTTTTCCTAGT
CAGGGGTGGCATGAGAAGTGTAGAATTCAAAGTCATAGAGACTGATCCTGCAGAGTATTG
TATCGTTGCACCAGATACAGAAATATTTTGTGAGGGTGAGCCTATTAAGAGGGAGGACGA
GGAAAGACTCGATGAGGTTGGCTATGACGATGTTGGTGGAGTTAGAAAGCAGATGGCCCA
AATCAGGGAACTGGTTGAACTTCCATTGCGTCATCCCCAGCTTTTCAAGTCTATTGGTGT
GAAACCACCAAAGGGCATATTGCTGTTTGGGCCTCCTGGCTCCGGCAAGACCCTTATTGC
TAGAGCTGTAGCTAATGAGACAGGTGCTTTCTTCTTTTTGATCAATGGACCAGAAATCAT
GTCAAAGCTAGCAGGAGAAAGTGAAAGCAATCTCAGAAAGGCATTTGAAGAAGCTGAGAA
AAATGCACCTTCCATCATTTTTATTGATGAGATAGATTCCATAGCACCTAAGAGAGAGAA
GACCCATGGAGAAGTTGAAAGGCGTATTGTTTCACAGCTCTTGACTCTTATGGATGGGCT
CAAGTCTCGTGCACATGTGATTGTTATGGGTGCCACCAACCGTCCAAACAGTATCGATCC
TGCTCTTAGAAGGTTTGGTAGGTTTGATCGCGAGATTGATATTGGTGTTCCAGATGAAGT
TGGCCGCCTTGAGGTTCTTCGGATTCACACGAAAAACATGAAGCTGGCTGAAGATGTTGA
CTTGGAGCTCATTGCGAAGGATACCCATGGGTATGTTGGTGCTGATCTTGCTGCCCTTTG
TACTGAAGCTGCTCTTCAATGCATTCGTGAGAAGATGGATATTATTGACCTTGAGGATGA
GACCATAGATGCTGAGATACTGAACTCTATGGCTGTCTCAAATGACCATTTCAAGACTGC
ACTTGGGACAAGCAACCCATCTGCTCTGCGTGAAACTGTGAATATCTCTAGGAGTACCCT
CTTCTGCAGGTTGTGATAAGTTTCTACTTGTTCAAGAAGCTAACCTTGAATATCCTTTTT
CAGGTTGTTGAAGTCCCAAATGTCTCTTGGGAAGATATTGGTGGTCTGGAAAATGTTAAG
AGGGAGCTACAGGAGACTGTTCAATATCCAGTGGAGCATCCAGATAAATTTGAAAAGTTT
GGCATGTCTCCTTCGAAGGGTGTTTTGTTTTATGGCCCTCCTGGCTGTGGCAAGACTCTG
TTGGCCAAGGCAATCGCTAATGAATGCCAGGCTAACTTCATCAGTGTGAAGGGTCCTGAA
CTGCTCACCATGTGGTTTGGTGAGAGCGAGGCCAATGTCCGTGAGATTTTTGACAAGGCT
AGGCAGTCTGCTCCGTGTGTCCTCTTCTTTGATGAGCTCGACTCCATTGCTACTCAGAGA
GGAAGCAGTGTTGGTGACGCGGGCGGTGCTGCTGACAGGGTGTTGAACCAGCTGCTTACT
GAGATGGATGGCATGAATGCCAAGAAGACGGTTTTCATTATCGGCGCGACTAACAGACCA
GATATCATTGACCCTGCCTTGCTGAGGCCAGGACGCCTCGATCAGCTTATCTACATTCCT
CTGCCCGATGAGCAGTCCAGGCTTCAGATCTTCAAAGCCTGCCTCAGGAAGTCTCCTGTG
GCTAAGGACGTTGACTTGCATGCTCTTGCCAAGTACACCCAGGGTTTCAGTGGAGCAGAT
ATCACCGAGATCTGCCAGCGTGCGTGCAAGTATGCCATCAGGGAGAACATCGAGAAGGAC
ATCGAGCGGGAGAGGCGCAGGAAGGACAACCCTGAGGCCATGGAGGAAGACGAGGTGGAC
GACATTGCCGAGATCATGGCTGCCCACTTCGAGGAGTCCATGAAGTACGCCCGCCGCAGT
GTCAGTGATGCCGACATCCGCAAGTACCAGGCCTTCGCCCAGACACTCCAGCAGTCCCGT
GGGTTTGGCAGCGAGTTCCGGTTCTCCGACCAACCGACGGCAGCTGCCGGTGCGGCCGAC
CCCTTTGCATCCGCAGCCGACGATGACGACTTATACAGCTAAACTGCACTTCTATTGTGA
CGCATCTTTCCTCCCTCCGTATATATGATTATATCATATGTTAATGCGTGTGTGGGGGTG
TTGCTGTACCTATACAGTGAAGTTAATATTTCTGT