Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048404_T022
CDS Infomation	cds chromosome:B73_RefGen_v4:9:155673476:155681254:1 gene:Zm00001d048404 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 20 description:Probable lysine-specific demethylase ELF6
Sequence	ATGCTTATTGTTTTCTGCACTTTGAATCTGGTAGTTCATTTTAATTTCAGAACCCCAAAT GTATTGTCTGGAATTCGTTCTCGCTTGAGAGATCGGAAAAAAGAAGAAAGAGAACTGCTG GTGAAGCAGGAATTCTTGCAGGACATGATTAGTGAAAACAAGCTTTTGTGTTCTTTCCTG GAAAAGAAATCAATTCGTCATGTTGTGCTCTGGGAGCCTGACTTGTTACCATCTTCGACT GCTCTACATTCCTGTTCTTCTGGCTCAAAAGCTCCTGAGAAGAAGTCTGAGGATGGTTGC AGAATTGAATCTAGTGAACGTGGCACCAAAGATAACAGCTCTGATGGCAGTGCACATATG ATTGGCGCACAAACTAAATTTATGTCCGGGAATAGCAAATCATCTGGAACTGCATCTGCT TCCATGGATGAGGTCAATGCTGATACTGATGATGAGGATGACCTACCTTTTGATTTGAGC ATTGATTCTGGGTCATTGACCTGTGTTGCTTGTGGAATTCTTGGTTATCCATTCATGGCA ATTCTGCAACCTTCAAGAGAAGTATTGGAAGGGATTTCCCTTGCTCACACGAGTAGATAC AAGATGAGTTCTGAAAAAGATAATTGTTCAAACACAATTCCATGCTGTCCCACTGACAGT AAGTTTGGATGTTCATTTGTTCCCAGTAGACCTTCTTGGCCTGCGGAACAGCAATGTCTG GCTACTCCTTTGGGGCAAGCTAACATCAGTCATCAGAATGTAAATTCACATAAAGATGTT TGTTTAAGGGAGAATGAACCTAATGGGCCTGTGCCACAATGTAACAATATTTCACATTCT TGCAGAAGTGAAAATACTCTTCATTCATGTAGTGACAGGGGAAAATCCGAGAATAAGATT TCTGAGGACAGTCTTGGCCCAGAAGTAGGTGAACAAACAGGCAAATATGTCATCAATGCG CAAGCTGCAGAAAGTTCTGATGGTACTATTAACTGGAATACTTATTGTACATTTGCACGG CCCCGGATCTTTTGCCTGCAGCATGCCCTTGAGATTGAAAAGTTGCTTGAGGGCAAAGGC GGTGTCCATGGTCTCATTATTTGCCACTCAGACTTTGTCAAACTAAAAGCACTTGCAATA TCAGTAGCTGAGGAAATTGAGTTTCAATTTGATTGTACAGACATTTCACTTGCAAAAGCA TCAAAGTCTGATTTACATCTGATCAATATTTCAATTGACGACGAGGGACATGAGGAAGAT GGAAGAGACTGGACGTCACAGATGGGTCTAAACCTGAAATATTCTGCCAAACTCAGGAAA GAGAAATCAGAAAATCAAGAACAGTCTCCTTTGCCATTTGGGGGACTGCTTTCCTGCCCT TCGCCTGTTTCGGTTGTTCCTAATCTTAAGTGGCTTTGCAAAAGAGCGCGGACACCATAC ACAGTTATTGGTACTATGAGGGGTTCTAGTGCAACAGCAACTGCTGCGGAACTTAAGCCT GGAGTGAAAACAGAAATATTCACTAATGGAAATGTTTGCGAGGATGACAATAGACATCAT TCTTTTCGACAAACTGGCCTCGAGCAACCAGGTGGACTGCAAGATTGTGATAAGCCTTCA TGTTCCGAGGAGAATGGCCATGGAAGACATTGTCTTGTTAACATTCCTATCGCTGTTGCT GAATATCCTATGATGCATCAAGTCCGTGAGGGTCCAGTGAGTGTTAGCACGTGCAATGAC TCCATTTGTTTGTCAGGTTCCCTGGATTTACCTCCACACGCCTCTCCAGTTGAAGTAACT AGATACCTAGGATGTATACAGTCAACTGAGCTGAGCAGTTTACCAGCCTTTTCTGTTCAA CATTTCTTTAATGATGAAAGTACCTCTGTGGAAGGAAGCATAGACTGTGTAAGCAATGGC TGCTTAGAATCTCAGGATGATATTTTAGGGAGCAGAGATGAACGTTTGCAAGTTCAACAA TATCAAGAGAAGATGGGGCTTCGCAATAACCCCAATATGAAGTCAGTTGATTCACACCTG ATAGAAGGTTTGGCTGTATCAGAAGGAAAGCATGGGGAAACTGTGGCAGCATTCCTTGAA AACAAGGAGCGTTGTGCTAAGACATCCTACTGTTCTAATACTGAAACAAAAACTACTAAA TCTGCAATAGACAATCGATTGGAGACTCATCATCTGGGTACTGGTCCAGTGAAACTAAAT TCAAGCTTTAATGAGATGCACAGTGCTGATAGACAATGCAGTTTAGTCTTTGGCTGCCTT GACTCAGCTGATGTTCCTGCTTCAACTCAGGCTCTGTCAGTTTCACCTGTTTTGATGAGT GACGAGCAGCAGGTCGATGACGCCCATTCTGCTGTCAAGGCCATTGAGCACCTGGGCAAT AATCTGGCTAACATAAAGCACAAATCCCTGCATATGGATGTCCTCATGTTAGAGGACGCC CAAGTTGCTTCCATGGCTGCAGTCCCTGGGCATGAGGGAGAATCTGTCGAGGCTGGATCA AATTCTTTTGATATTTTACTTGGAGCTCTGGCTGAAGAGTCCAAGGCAGCAGATGCTCCT GGGAAAGATGAAGTTGGCAAAGCTTCCTTGACATTAATAACACTGGCTAGCAACGAGCCC TCTGTTACAGAAGGCAGAGTTGTAGACGTGGTGGAAACAGACACAATTTTGGGAGCAGGA AAAGATGATAAACAACTTGACCAGCCACATGGCTTCCATTTGTCAGATCTGGTGTCTAGA TGCATCGGGAGCTCAAATAGATCCGATATCATATGCTATGTCAGACGCAAACACAAAAGG AAGAGGGATTACTCGTGTTTCGTCCGCTCTCCCTGTGAGAGCTTGAGGCCAAGGTCCAAG CCTGCAGTAGTCGAGGAGTCGGAATGGAGCAGAACAGCCGAGGCTTCTTTTGCTAAAAGG GGTAAGAGGACACAAGCAGTGGGATCATTTCAGTGTGATATTGATCTGTGTGACATGGCA TTTGAGACTAGGGCCGAACTCAATGCCCACAAGCGCAATATTTGCACTGACGAGTCATGT GGCAAGCGTTTCAGCTCACACAAATACTTGAAGCGACATCAGTGTGTCCACAGCGAGATG AGGCCATTTAAATGCCCCTGGGAAGGTTGTAAAATGACCTTCAAGTGGTTGTGGGCTCAG ACTGAGCATGTCAGAGTGCACACTGGAGAGCGGCCATACAAGTGCTCGGCTCCTGACTGC GGGCAGACATTCAGATACGTATCGGATTACAGCCGGCACAGAAAGAAATTTAACCATTAC TGA

Peptide Sequence

PEP ID	Zm00001d048404_P022
PEP Infomation	pep chromosome:B73_RefGen_v4:9:155673476:155681254:1 gene:Zm00001d048404 transcript:Zm00001d048404_T022 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 20 description:Probable lysine-specific demethylase ELF6
Sequence	MLIVFCTLNLVVHFNFRTPNVLSGIRSRLRDRKKEERELLVKQEFLQDMISENKLLCSFL EKKSIRHVVLWEPDLLPSSTALHSCSSGSKAPEKKSEDGCRIESSERGTKDNSSDGSAHM IGAQTKFMSGNSKSSGTASASMDEVNADTDDEDDLPFDLSIDSGSLTCVACGILGYPFMA ILQPSREVLEGISLAHTSRYKMSSEKDNCSNTIPCCPTDSKFGCSFVPSRPSWPAEQQCL ATPLGQANISHQNVNSHKDVCLRENEPNGPVPQCNNISHSCRSENTLHSCSDRGKSENKI SEDSLGPEVGEQTGKYVINAQAAESSDGTINWNTYCTFARPRIFCLQHALEIEKLLEGKG GVHGLIICHSDFVKLKALAISVAEEIEFQFDCTDISLAKASKSDLHLINISIDDEGHEED GRDWTSQMGLNLKYSAKLRKEKSENQEQSPLPFGGLLSCPSPVSVVPNLKWLCKRARTPY TVIGTMRGSSATATAAELKPGVKTEIFTNGNVCEDDNRHHSFRQTGLEQPGGLQDCDKPS CSEENGHGRHCLVNIPIAVAEYPMMHQVREGPVSVSTCNDSICLSGSLDLPPHASPVEVT RYLGCIQSTELSSLPAFSVQHFFNDESTSVEGSIDCVSNGCLESQDDILGSRDERLQVQQ YQEKMGLRNNPNMKSVDSHLIEGLAVSEGKHGETVAAFLENKERCAKTSYCSNTETKTTK SAIDNRLETHHLGTGPVKLNSSFNEMHSADRQCSLVFGCLDSADVPASTQALSVSPVLMS DEQQVDDAHSAVKAIEHLGNNLANIKHKSLHMDVLMLEDAQVASMAAVPGHEGESVEAGS NSFDILLGALAEESKAADAPGKDEVGKASLTLITLASNEPSVTEGRVVDVVETDTILGAG KDDKQLDQPHGFHLSDLVSRCIGSSNRSDIICYVRRKHKRKRDYSCFVRSPCESLRPRSK PAVVEESEWSRTAEASFAKRGKRTQAVGSFQCDIDLCDMAFETRAELNAHKRNICTDESC GKRFSSHKYLKRHQCVHSEMRPFKCPWEGCKMTFKWLWAQTEHVRVHTGERPYKCSAPDC GQTFRYVSDYSRHRKKFNHY

Transcript Sequence

Transcript ID	Zm00001d048404_T022
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:155673476:155681254:1 gene:Zm00001d048404 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:JUMONJI-transcription factor 20 description:Probable lysine-specific demethylase ELF6
Sequence	TAAATAGTTTTAAAAATATTTTTAATCTAAATAATAAACAAAATGACTTATCTAAATGCC CTCTAAAGGTCCACAACTCTAGCTTCAGGATTTTCTGAAGCACCTAAGGCCATGTTTAGC ATGGCTCCAATTCCAAACTCTAGACTCTGGAGTTGAGTTTAGCCAGCCAAACACCCCAAC TCCACATTTTTTTGGAGCAGCCCACCTCTATGGAGTTGGTGGAGCTCTAGTTCATTTTGA GGCTGGAGTTTGGAGCACCTCTTTTCTAGCTCCAAACCAATCCAATATGGATGTAGACAT AGAGTTATATATTATTTACCCATCAATGCCATCCATTACACAGGAAAAATGTTGCGATTG TTTCCTGAGAACCCTATTCTTCTTACTCCTCTTGCACGCACCCCATCTCCTGCGTCCTCC GCCCCCAGCCGCCGGTCTTTGCTGTGTGCCCTGCCAGGGCGTGTGCCGCCCTCACTGTTG TCTGCCCGCACGCAACACACCCCATCTGCACGCTGCCCCTGCCGCCAGTATTCCTGCATG CATCGCCTAGGCGTGCGTCAGAGCCCCGCCGTCTGTCTTCGTCACGCCTGGGCTTAGGCG TGCACCAGTCCTTGCGCCCTGCACCCGACCGCACGGCTGCAGCGACTTGGACTGCGGGCT CTCTGCCCTCTGCAGTGGTAGCACATGACGGCTAGCCAAACACCTCCTTCCAGTCAGCTC CAACTCCACGTGGAGCCTGCTCCGCCTGGAGTTGTGGAGTGCAGCAGGAACAGGAATCTG TGGAGTTGGAGCCATGCCAAACAGGGCCTAAGACATGCTCCACCAATGCAAGCCCAGGAA ATTCTGGCCTAGCTATGTTGGACAAAAGTTAGGGTTAGAACTTGACTAGTAATATGGTGA TACTTCTTTGCTGTCTTTGCATGTATGACTTGATTTTTATCCAGCATTTGCTAGTTGCTG CTAAAACAACCTTTCTTTATTAAAATTCTTAAATTATTAAGAAACACCTATTATTCATCT TCTACAAATTTAACTTGACAATCTTGATATTTGATCTCTTGATTTATGCTTACCTAGCTT TTTAGTGATCTTGTTACAACCATTAGAGCACCATACCAATGCTTATTGTTTTCTGCACTT TGAATCTGGTAGTTCATTTTAATTTCAGAACCCCAAATGTATTGTCTGGAATTCGTTCTC GCTTGAGAGATCGGAAAAAAGAAGAAAGAGAACTGCTGGTGAAGCAGGAATTCTTGCAGG ACATGATTAGTGAAAACAAGCTTTTGTGTTCTTTCCTGGAAAAGAAATCAATTCGTCATG TTGTGCTCTGGGAGCCTGACTTGTTACCATCTTCGACTGCTCTACATTCCTGTTCTTCTG GCTCAAAAGCTCCTGAGAAGAAGTCTGAGGATGGTTGCAGAATTGAATCTAGTGAACGTG GCACCAAAGATAACAGCTCTGATGGCAGTGCACATATGATTGGCGCACAAACTAAATTTA TGTCCGGGAATAGCAAATCATCTGGAACTGCATCTGCTTCCATGGATGAGGTCAATGCTG ATACTGATGATGAGGATGACCTACCTTTTGATTTGAGCATTGATTCTGGGTCATTGACCT GTGTTGCTTGTGGAATTCTTGGTTATCCATTCATGGCAATTCTGCAACCTTCAAGAGAAG TATTGGAAGGGATTTCCCTTGCTCACACGAGTAGATACAAGATGAGTTCTGAAAAAGATA ATTGTTCAAACACAATTCCATGCTGTCCCACTGACAGTAAGTTTGGATGTTCATTTGTTC CCAGTAGACCTTCTTGGCCTGCGGAACAGCAATGTCTGGCTACTCCTTTGGGGCAAGCTA ACATCAGTCATCAGAATGTAAATTCACATAAAGATGTTTGTTTAAGGGAGAATGAACCTA ATGGGCCTGTGCCACAATGTAACAATATTTCACATTCTTGCAGAAGTGAAAATACTCTTC ATTCATGTAGTGACAGGGGAAAATCCGAGAATAAGATTTCTGAGGACAGTCTTGGCCCAG AAGTAGGTGAACAAACAGGCAAATATGTCATCAATGCGCAAGCTGCAGAAAGTTCTGATG GTACTATTAACTGGAATACTTATTGTACATTTGCACGGCCCCGGATCTTTTGCCTGCAGC ATGCCCTTGAGATTGAAAAGTTGCTTGAGGGCAAAGGCGGTGTCCATGGTCTCATTATTT GCCACTCAGACTTTGTCAAACTAAAAGCACTTGCAATATCAGTAGCTGAGGAAATTGAGT TTCAATTTGATTGTACAGACATTTCACTTGCAAAAGCATCAAAGTCTGATTTACATCTGA TCAATATTTCAATTGACGACGAGGGACATGAGGAAGATGGAAGAGACTGGACGTCACAGA TGGGTCTAAACCTGAAATATTCTGCCAAACTCAGGAAAGAGAAATCAGAAAATCAAGAAC AGTCTCCTTTGCCATTTGGGGGACTGCTTTCCTGCCCTTCGCCTGTTTCGGTTGTTCCTA ATCTTAAGTGGCTTTGCAAAAGAGCGCGGACACCATACACAGTTATTGGTACTATGAGGG GTTCTAGTGCAACAGCAACTGCTGCGGAACTTAAGCCTGGAGTGAAAACAGAAATATTCA CTAATGGAAATGTTTGCGAGGATGACAATAGACATCATTCTTTTCGACAAACTGGCCTCG AGCAACCAGGTGGACTGCAAGATTGTGATAAGCCTTCATGTTCCGAGGAGAATGGCCATG GAAGACATTGTCTTGTTAACATTCCTATCGCTGTTGCTGAATATCCTATGATGCATCAAG TCCGTGAGGGTCCAGTGAGTGTTAGCACGTGCAATGACTCCATTTGTTTGTCAGGTTCCC TGGATTTACCTCCACACGCCTCTCCAGTTGAAGTAACTAGATACCTAGGATGTATACAGT CAACTGAGCTGAGCAGTTTACCAGCCTTTTCTGTTCAACATTTCTTTAATGATGAAAGTA CCTCTGTGGAAGGAAGCATAGACTGTGTAAGCAATGGCTGCTTAGAATCTCAGGATGATA TTTTAGGGAGCAGAGATGAACGTTTGCAAGTTCAACAATATCAAGAGAAGATGGGGCTTC GCAATAACCCCAATATGAAGTCAGTTGATTCACACCTGATAGAAGGTTTGGCTGTATCAG AAGGAAAGCATGGGGAAACTGTGGCAGCATTCCTTGAAAACAAGGAGCGTTGTGCTAAGA CATCCTACTGTTCTAATACTGAAACAAAAACTACTAAATCTGCAATAGACAATCGATTGG AGACTCATCATCTGGGTACTGGTCCAGTGAAACTAAATTCAAGCTTTAATGAGATGCACA GTGCTGATAGACAATGCAGTTTAGTCTTTGGCTGCCTTGACTCAGCTGATGTTCCTGCTT CAACTCAGGCTCTGTCAGTTTCACCTGTTTTGATGAGTGACGAGCAGCAGGTCGATGACG CCCATTCTGCTGTCAAGGCCATTGAGCACCTGGGCAATAATCTGGCTAACATAAAGCACA AATCCCTGCATATGGATGTCCTCATGTTAGAGGACGCCCAAGTTGCTTCCATGGCTGCAG TCCCTGGGCATGAGGGAGAATCTGTCGAGGCTGGATCAAATTCTTTTGATATTTTACTTG GAGCTCTGGCTGAAGAGTCCAAGGCAGCAGATGCTCCTGGGAAAGATGAAGTTGGCAAAG CTTCCTTGACATTAATAACACTGGCTAGCAACGAGCCCTCTGTTACAGAAGGCAGAGTTG TAGACGTGGTGGAAACAGACACAATTTTGGGAGCAGGAAAAGATGATAAACAACTTGACC AGCCACATGGCTTCCATTTGTCAGATCTGGTGTCTAGATGCATCGGGAGCTCAAATAGAT CCGATATCATATGCTATGTCAGACGCAAACACAAAAGGAAGAGGGATTACTCGTGTTTCG TCCGCTCTCCCTGTGAGAGCTTGAGGCCAAGGTCCAAGCCTGCAGTAGTCGAGGAGTCGG AATGGAGCAGAACAGCCGAGGCTTCTTTTGCTAAAAGGGGTAAGAGGACACAAGCAGTGG GATCATTTCAGTGTGATATTGATCTGTGTGACATGGCATTTGAGACTAGGGCCGAACTCA ATGCCCACAAGCGCAATATTTGCACTGACGAGTCATGTGGCAAGCGTTTCAGCTCACACA AATACTTGAAGCGACATCAGTGTGTCCACAGCGAGATGAGGCCATTTAAATGCCCCTGGG AAGGTTGTAAAATGACCTTCAAGTGGTTGTGGGCTCAGACTGAGCATGTCAGAGTGCACA CTGGAGAGCGGCCATACAAGTGCTCGGCTCCTGACTGCGGGCAGACATTCAGATACGTAT CGGATTACAGCCGGCACAGAAAGAAATTTAACCATTACTGACAGCTTCTAGTTTTCCGAG TTATTGGCCGCAGCTCGGGGCAAATCTCCAGCTGCTTGTGTCGGTGGGCCTTGTTTGTTG TAGTAGCTCAGCTCACGTATTTATTAACAACCTGACAGCTGATAGGCCTAGTGAATGTTC CCCGTTAACAATGGGCTAGTAATTTAGTCGGTGTAGGAGTTAGAAATTGTTGGGGGGTGA AGTGCAACCCCCTTCTGTTGGTGTAGGTTTGCATAAGCTGATCACCCCCCACTGACACGT GGCCATTCATTATTTGTTTCTCAGATCAGTGATGATGTATTTAATCCCTGATGACAAACT TCATGAACACTGAAACCATATGATGTCGGATGTCAAAATGATCAGGGGTTGCCACCGTCC TCAT