Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048373_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:9:155236317:155242285:-1 gene:Zm00001d048373 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:white cap1 description:Carotenoid 910(9'10')-cleavage dioxygenase 1
Sequence	ATGGGGACGGAGGCGGAGCAGCCGGACATGGACAGCCACCGAAACGACGGCGTCGTGGTG GTGCCAGCGCCGCGCCCGCGTAAGGGGCTCGCCTCCTGGGCGCTTGACCTGCTCGAGTCC CTCGCCGTGCGCCTCGGCCACGACAAGACCAAGCCGCTCCACTGGCTCTCCGGCAACTTC GCCCCCGTCGTCGAGGAGACCCCGCCGGCCCCAAACCTTAGCGTCCGCGGACACCTCCCG GAGTGCTTGAATGGAGAGTTTGTCAGGGTTGGGCCTAATCCGAAGTTTGCTCCTGTTGCG GGGTATCACTGGTTTGATGGAGACGGGATGATTCATGCCATGCGTATTAAGGATGGAAAA GCTACCTATGTATCAAGATATGTGAAGACTGCCCGCCTCAAACAAGAGGAGTATTTTGGT GGAGCAAAGTTTATGAAGATTGGAGACCTTAAGGGATTTTTTGGATTGTTTATGGTCCAA ATGCAGCAACTTCGGAAAAAATTCAAAGTCTTGGATTTTACCTATGGATTTGGGACAGCT AATACTGCACTTATATATCATCATGGTAAACTCATGGCCTTGTCAGAAGCAGATAAGCCA TATGTTGTTAAGGTCCTTGAAGATGGAGACTTGCAGACTCTTGGCTTGTTGGATTATGAC AAAAGGTTGAAACATTCTTTTACTGCCCATCCAAAGGTTGACCCTTTTACAGATGAAATG TTCACATTCGGATATTCACATGAACCTCCATACTGTACATACCGTGTGATTAACAAAGAA GGAGCTATGCTTGATCCTGTGCCAATAACAATACCGGAATCTGTAATGATGCATGATTTT GCCATCACAGAGAATTACTCTATTTTTATGGACCTCCCTTTATTGTTCCGACCAAAGGAA ATGGTGAAGAACGGTGAGTTTATCTACAAGTTTGATCCTACAAAGAAAGGTCGTTTTGGT ATTCTCCCCCGCTATGCAAAGGATGACAAACTCATCAGATGGTTTCAACTCCCTAATTGT TTCATATTCCATAATGCTAATGCTTGGGAAGAGGGTGATGAAGTTGTTCTCATTACCTGC CGCCTTGAGAATCCAGATTTGGACAAGGTGAATGGATATCAAAGTGACAAGCTCGAAAAC TTCGGGAATGAGCTGTACGAGATGAGATTCAACATGAAAACGGGTGCTGCTTCACAAAAG CAATTGTCTGTTTCTGCTGTGGATTTTCCTCGTGTTAATGAGAGCTATACTGGCAGAAAG CAGCGGTATGTCTACTGCACTATACTTGACAGCATTGCGAAGGTGACTGGCATCATAAAG TTTGATCTGCATGCTGAACCGGAAAGTGGTGTGAAAGAACTTGAAGTGGGAGGAAATGTA CAAGGCATATATGACCTGGGACCTGGTAGATTTGGTTCAGAGGCGATTTTTGTTCCCAAG CATCCAGGTGTGTCCGGAGAAGAAGATGACGGCTATTTGATATTCTTTGTACACGACGAG AATACAGGGAAATCTGAAGTAAATGTTATCGATGCAAAGACAATGTCTGCTGATCCAGTT GCGGTGGTTGAGCTTCCTAATAGGGTTCCTTATGGATTCCATGCCTTCTTTGTAACTGAG GACCAACTGGCTCGACAGGCGGAGGGGCAGTGA

Peptide Sequence

PEP ID	Zm00001d048373_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:9:155236317:155242285:-1 gene:Zm00001d048373 transcript:Zm00001d048373_T002 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:white cap1 description:Carotenoid 910(9'10')-cleavage dioxygenase 1
Sequence	MGTEAEQPDMDSHRNDGVVVVPAPRPRKGLASWALDLLESLAVRLGHDKTKPLHWLSGNF APVVEETPPAPNLSVRGHLPECLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHAMRIKDGK ATYVSRYVKTARLKQEEYFGGAKFMKIGDLKGFFGLFMVQMQQLRKKFKVLDFTYGFGTA NTALIYHHGKLMALSEADKPYVVKVLEDGDLQTLGLLDYDKRLKHSFTAHPKVDPFTDEM FTFGYSHEPPYCTYRVINKEGAMLDPVPITIPESVMMHDFAITENYSIFMDLPLLFRPKE MVKNGEFIYKFDPTKKGRFGILPRYAKDDKLIRWFQLPNCFIFHNANAWEEGDEVVLITC RLENPDLDKVNGYQSDKLENFGNELYEMRFNMKTGAASQKQLSVSAVDFPRVNESYTGRK QRYVYCTILDSIAKVTGIIKFDLHAEPESGVKELEVGGNVQGIYDLGPGRFGSEAIFVPK HPGVSGEEDDGYLIFFVHDENTGKSEVNVIDAKTMSADPVAVVELPNRVPYGFHAFFVTE DQLARQAEGQ

Transcript Sequence

Transcript ID	Zm00001d048373_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:155236317:155242285:-1 gene:Zm00001d048373 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:white cap1 description:Carotenoid 910(9'10')-cleavage dioxygenase 1
Sequence	GACGTCCGACGAGTGGCGTTGAGGACAGAAGACGACGAGTGGAGTGGAGTAGGACACGAG GTGGTTCCGGCCGGCCCACTCGCAGAATCTTCTGCCACTGCCCTTCCATCTCGTCCCTTA GCTACAAGTCATCTCGCCGCAACCGGAACCCGCAGCCATGGGGACGGAGGCGGAGCAGCC GGACATGGACAGCCACCGAAACGACGGCGTCGTGGTGGTGCCAGCGCCGCGCCCGCGTAA GGGGCTCGCCTCCTGGGCGCTTGACCTGCTCGAGTCCCTCGCCGTGCGCCTCGGCCACGA CAAGACCAAGCCGCTCCACTGGCTCTCCGGCAACTTCGCCCCCGTCGTCGAGGAGACCCC GCCGGCCCCAAACCTTAGCGTCCGCGGACACCTCCCGGAGTGCTTGAATGGAGAGTTTGT CAGGGTTGGGCCTAATCCGAAGTTTGCTCCTGTTGCGGGGTATCACTGGTTTGATGGAGA CGGGATGATTCATGCCATGCGTATTAAGGATGGAAAAGCTACCTATGTATCAAGATATGT GAAGACTGCCCGCCTCAAACAAGAGGAGTATTTTGGTGGAGCAAAGTTTATGAAGATTGG AGACCTTAAGGGATTTTTTGGATTGTTTATGGTCCAAATGCAGCAACTTCGGAAAAAATT CAAAGTCTTGGATTTTACCTATGGATTTGGGACAGCTAATACTGCACTTATATATCATCA TGGTAAACTCATGGCCTTGTCAGAAGCAGATAAGCCATATGTTGTTAAGGTCCTTGAAGA TGGAGACTTGCAGACTCTTGGCTTGTTGGATTATGACAAAAGGTTGAAACATTCTTTTAC TGCCCATCCAAAGGTTGACCCTTTTACAGATGAAATGTTCACATTCGGATATTCACATGA ACCTCCATACTGTACATACCGTGTGATTAACAAAGAAGGAGCTATGCTTGATCCTGTGCC AATAACAATACCGGAATCTGTAATGATGCATGATTTTGCCATCACAGAGAATTACTCTAT TTTTATGGACCTCCCTTTATTGTTCCGACCAAAGGAAATGGTGAAGAACGGTGAGTTTAT CTACAAGTTTGATCCTACAAAGAAAGGTCGTTTTGGTATTCTCCCCCGCTATGCAAAGGA TGACAAACTCATCAGATGGTTTCAACTCCCTAATTGTTTCATATTCCATAATGCTAATGC TTGGGAAGAGGGTGATGAAGTTGTTCTCATTACCTGCCGCCTTGAGAATCCAGATTTGGA CAAGGTGAATGGATATCAAAGTGACAAGCTCGAAAACTTCGGGAATGAGCTGTACGAGAT GAGATTCAACATGAAAACGGGTGCTGCTTCACAAAAGCAATTGTCTGTTTCTGCTGTGGA TTTTCCTCGTGTTAATGAGAGCTATACTGGCAGAAAGCAGCGGTATGTCTACTGCACTAT ACTTGACAGCATTGCGAAGGTGACTGGCATCATAAAGTTTGATCTGCATGCTGAACCGGA AAGTGGTGTGAAAGAACTTGAAGTGGGAGGAAATGTACAAGGCATATATGACCTGGGACC TGGTAGATTTGGTTCAGAGGCGATTTTTGTTCCCAAGCATCCAGGTGTGTCCGGAGAAGA AGATGACGGCTATTTGATATTCTTTGTACACGACGAGAATACAGGGAAATCTGAAGTAAA TGTTATCGATGCAAAGACAATGTCTGCTGATCCAGTTGCGGTGGTTGAGCTTCCTAATAG GGTTCCTTATGGATTCCATGCCTTCTTTGTAACTGAGGACCAACTGGCTCGACAGGCGGA GGGGCAGTGAAGATACGGCACCTGCAGATTCTGCACACGCGGGTACATGTTGGAAGTTAT TGCAGGACATGTATATGTATAGGACAAGTTTATTACACATGTATTCGAACCACACATTAC ACAAGTTTATTGCAGGACGTGTATTCGAACCACACATTACACATGTATATGTGTAGGACA AGTTTATTACAGTCCTGATTGATTG