Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048361_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:155107951:155110341:1 gene:Zm00001d048361 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein
Sequence	ATGGGCCCGGCCGCGCAGCCGCCGGACGCCGGCGGCGGTGGGGACCCGGAGGCGTGGTAC GGCAGCATCCAGTACCTCATCAACATCTCCGCCGTGGGGGCCGCCTCCTGCGTCCTGCTG TTCCTCCTCGTTAAGCTCCGGTTCGACCACCGCCGCATCCCGGGGCCCTCCGCGCTCGCC GCCAAGCTTCTCGCCGTCTACCACGCCACCGCGGCGCAGATCGCTCTCCACTGCGGCGCC GACGCCGCTCAGTTCCTCCTCTTCGAGCGCGCCTCCTTCCTCATCCTCGCCGCCGTCGCC GCTGCCGCCGTCGCCGCGGCGCTCCCGCTCAACCTCCTCGCGGGGGACGCCGCCGTCGTC GACCAGTTCGCTTCCACGACCATCTCGCACATCCCCAAGTCGTCCCCGCTCCTCTGGCTC CACCTCCTCCTCACCGCCGCCGTCGTTGCCATCGCGCACCTCGGCATCTCTCGCATGGAG GACGCGCTACGCATCACGCGCTTCCGCGACGGCAACGGCAACCCCAGCGACCCCAACTCC AGCTCCGTCGCCGTCTTCACCATAATGATCCAGGGCATCCCCAAGACGCTGGCCGCGGAC AAGACCCCGCTCAAGGACTACTTCGACCACAAGTACCCTGGCAAGGTTTACCGTGTCATC GTGCCATTTGATCTATGCACGCTGGAGCATCTCGTCGAGCAATTGGGGAAGGTCCGTAAC AAGATCTCTTGGCTGGAGGCAAGGTTGGGCGCCCGCGACCTGTTTGATGACATTGTGCAC GATAACGACGACACAGTGCAGTCAGAAGAGCATTGGTTTGTGCGAAGGTGCAGAGGGCTG TGGGCAATGGCAGGGGAGAGGCTAGGGTTCACTGACGAGGAGAGATTGAGGAAGTTGCAG ACTAAGAAACTTGTGCTCGCAAGCAGGCTATCTGATTATAAGGAAGGGTGCGCCCCTGGC GCTGGTGTAGCTTTTGTGGTGTTTAAAGATGTCTACACCGCAAACAAGGCGGTAAAGGAT TTCAAGATGGAGAGGAAGAAGACACCGATTGGTAGGTTTTTCCCAGTGATGGAGCTCCAG CTCGAGAGAAGTCGATGGAAAGTGGAGAGAGCACCACCGGCATCAGATATCTACTGGAAT CATCTAGGTCTTAGCAAGATATCTTCACGGCTGAGGAGGATTGCAGTCAACACCTGCCTA ATTTTGATGCTCCTGTTCTTCAGTTCACCCTTGGCAATCATCAGTGGGATGCAAAACGCG GCACGAATCATCAATGTGGAGGCTATGGATCATGCCAAATCATGGCTTGCCTGGCTTGAA GGTTCAAGCTGGTTCTGGACCATAATCTTTCAGTTTCTTCCCAATGTGCTCATCTTTGTG AGCATGTATATCATCATCCCGTCGGTGTTGTCGTACTTCTCCAAGTTTGAGTGTCATCTG ACAGTGTCAGGGGAGCAGAGGGCTGCATTGCTGAAGATGGTTTGCTTCTTCCTTGTCAAT CTCATCCTATTGCGTGCTCTTGTGGAATCATCACTTGAAAGTTGGATACTTAGCATGGGG CGGTGCTACTTGGATGGTCCAGACTGCAAGCAGATTGAACGCTATTTAAGCCCATCCTTT TTATCAAGATCATCGCTTTCTTCCCTGGCATTCCTGATCACATGTACCTTTCTGGGAATA TCTTTTGATCTGTTGGCACCAATCCCTTGGATAAAGCATATAATGAAGAAATTTAGGAAG AATGATATGGTCCAGTTGGTCCCTGAAGAGAATGAAGACTACCTACCCATGCAGAATGGT GAAGAAACTAATAATTTGACAGCACCTCTAATGCCTGAGAGAGAAGACGGTGGCCTTTTG GATAATATCGAGGGGCATGATCTTTCCCTGTACCCACTAAACAGGAGCTTCCATATGCCA AAGCAGAAATTTGACTTCGCACAGTACTATGCTTTTGACATTACTATATTTGCCCTCACA CTGATCTACTCCCTGTTTGCTCCGCTCGTGGTTCCTGTGGGTGCGACATACTTTGGCTAC CGTTATCTCGTGGACAAGTACAACTTCTTGTTCGTTTACAGAGTTAGAGGGTTTCCTGCC GGCAATGATGGGAAGCTGATGGACAGAGTGTTGTGCATCATGCAATTCTGTGTGATCTTC TTCCTTGCTGCAATGCTGCTCTTCTTTGCTGTTCAGGGTGACTCGATGAAGCTACAGGCT ATATGTACTCTTGGGATGTTAGTGTTCTATAAGTTGCTTCCCTCTAGAAGCGATCGCTTC CAGCCATCTTTGTTAGAAGGGATGCAGACAGTGAATAGCTTTGTAGATGGTCCCACGGAT TATGAAGTTTTTTCACAACCTGACCTGGATTGGAGTCTGTATCAATCCTGA

Peptide Sequence

PEP ID	Zm00001d048361_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:155107951:155110341:1 gene:Zm00001d048361 transcript:Zm00001d048361_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein
Sequence	MGPAAQPPDAGGGGDPEAWYGSIQYLINISAVGAASCVLLFLLVKLRFDHRRIPGPSALA AKLLAVYHATAAQIALHCGADAAQFLLFERASFLILAAVAAAAVAAALPLNLLAGDAAVV DQFASTTISHIPKSSPLLWLHLLLTAAVVAIAHLGISRMEDALRITRFRDGNGNPSDPNS SSVAVFTIMIQGIPKTLAADKTPLKDYFDHKYPGKVYRVIVPFDLCTLEHLVEQLGKVRN KISWLEARLGARDLFDDIVHDNDDTVQSEEHWFVRRCRGLWAMAGERLGFTDEERLRKLQ TKKLVLASRLSDYKEGCAPGAGVAFVVFKDVYTANKAVKDFKMERKKTPIGRFFPVMELQ LERSRWKVERAPPASDIYWNHLGLSKISSRLRRIAVNTCLILMLLFFSSPLAIISGMQNA ARIINVEAMDHAKSWLAWLEGSSWFWTIIFQFLPNVLIFVSMYIIIPSVLSYFSKFECHL TVSGEQRAALLKMVCFFLVNLILLRALVESSLESWILSMGRCYLDGPDCKQIERYLSPSF LSRSSLSSLAFLITCTFLGISFDLLAPIPWIKHIMKKFRKNDMVQLVPEENEDYLPMQNG EETNNLTAPLMPEREDGGLLDNIEGHDLSLYPLNRSFHMPKQKFDFAQYYAFDITIFALT LIYSLFAPLVVPVGATYFGYRYLVDKYNFLFVYRVRGFPAGNDGKLMDRVLCIMQFCVIF FLAAMLLFFAVQGDSMKLQAICTLGMLVFYKLLPSRSDRFQPSLLEGMQTVNSFVDGPTD YEVFSQPDLDWSLYQS

Transcript Sequence

Transcript ID	Zm00001d048361_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:155107951:155110341:1 gene:Zm00001d048361 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein
Sequence	ATGGGCCCGGCCGCGCAGCCGCCGGACGCCGGCGGCGGTGGGGACCCGGAGGCGTGGTAC GGCAGCATCCAGTACCTCATCAACATCTCCGCCGTGGGGGCCGCCTCCTGCGTCCTGCTG TTCCTCCTCGTTAAGCTCCGGTTCGACCACCGCCGCATCCCGGGGCCCTCCGCGCTCGCC GCCAAGCTTCTCGCCGTCTACCACGCCACCGCGGCGCAGATCGCTCTCCACTGCGGCGCC GACGCCGCTCAGTTCCTCCTCTTCGAGCGCGCCTCCTTCCTCATCCTCGCCGCCGTCGCC GCTGCCGCCGTCGCCGCGGCGCTCCCGCTCAACCTCCTCGCGGGGGACGCCGCCGTCGTC GACCAGTTCGCTTCCACGACCATCTCGCACATCCCCAAGTCGTCCCCGCTCCTCTGGCTC CACCTCCTCCTCACCGCCGCCGTCGTTGCCATCGCGCACCTCGGCATCTCTCGCATGGAG GACGCGCTACGCATCACGCGCTTCCGCGACGGCAACGGCAACCCCAGCGACCCCAACTCC AGCTCCGTCGCCGTCTTCACCATAATGATCCAGGGCATCCCCAAGACGCTGGCCGCGGAC AAGACCCCGCTCAAGGACTACTTCGACCACAAGTACCCTGGCAAGGTTTACCGTGTCATC GTGCCATTTGATCTATGCACGCTGGAGCATCTCGTCGAGCAATTGGGGAAGGTCCGTAAC AAGATCTCTTGGCTGGAGGCAAGGTTGGGCGCCCGCGACCTGTTTGATGACATTGTGCAC GATAACGACGACACAGTGCAGTCAGAAGAGCATTGGTTTGTGCGAAGGTGCAGAGGGCTG TGGGCAATGGCAGGGGAGAGGCTAGGGTTCACTGACGAGGAGAGATTGAGGAAGTTGCAG ACTAAGAAACTTGTGCTCGCAAGCAGGCTATCTGATTATAAGGAAGGGTGCGCCCCTGGC GCTGGTGTAGCTTTTGTGGTGTTTAAAGATGTCTACACCGCAAACAAGGCGGTAAAGGAT TTCAAGATGGAGAGGAAGAAGACACCGATTGGTAGGTTTTTCCCAGTGATGGAGCTCCAG CTCGAGAGAAGTCGATGGAAAGTGGAGAGAGCACCACCGGCATCAGATATCTACTGGAAT CATCTAGGTCTTAGCAAGATATCTTCACGGCTGAGGAGGATTGCAGTCAACACCTGCCTA ATTTTGATGCTCCTGTTCTTCAGTTCACCCTTGGCAATCATCAGTGGGATGCAAAACGCG GCACGAATCATCAATGTGGAGGCTATGGATCATGCCAAATCATGGCTTGCCTGGCTTGAA GGTTCAAGCTGGTTCTGGACCATAATCTTTCAGTTTCTTCCCAATGTGCTCATCTTTGTG AGCATGTATATCATCATCCCGTCGGTGTTGTCGTACTTCTCCAAGTTTGAGTGTCATCTG ACAGTGTCAGGGGAGCAGAGGGCTGCATTGCTGAAGATGGTTTGCTTCTTCCTTGTCAAT CTCATCCTATTGCGTGCTCTTGTGGAATCATCACTTGAAAGTTGGATACTTAGCATGGGG CGGTGCTACTTGGATGGTCCAGACTGCAAGCAGATTGAACGCTATTTAAGCCCATCCTTT TTATCAAGATCATCGCTTTCTTCCCTGGCATTCCTGATCACATGTACCTTTCTGGGAATA TCTTTTGATCTGTTGGCACCAATCCCTTGGATAAAGCATATAATGAAGAAATTTAGGAAG AATGATATGGTCCAGTTGGTCCCTGAAGAGAATGAAGACTACCTACCCATGCAGAATGGT GAAGAAACTAATAATTTGACAGCACCTCTAATGCCTGAGAGAGAAGACGGTGGCCTTTTG GATAATATCGAGGGGCATGATCTTTCCCTGTACCCACTAAACAGGAGCTTCCATATGCCA AAGCAGAAATTTGACTTCGCACAGTACTATGCTTTTGACATTACTATATTTGCCCTCACA CTGATCTACTCCCTGTTTGCTCCGCTCGTGGTTCCTGTGGGTGCGACATACTTTGGCTAC CGTTATCTCGTGGACAAGTACAACTTCTTGTTCGTTTACAGAGTTAGAGGGTTTCCTGCC GGCAATGATGGGAAGCTGATGGACAGAGTGTTGTGCATCATGCAATTCTGTGTGATCTTC TTCCTTGCTGCAATGCTGCTCTTCTTTGCTGTTCAGGGTGACTCGATGAAGCTACAGGCT ATATGTACTCTTGGGATGTTAGTGTTCTATAAGTTGCTTCCCTCTAGAAGCGATCGCTTC CAGCCATCTTTGTTAGAAGGGATGCAGACAGTGAATAGCTTTGTAGATGGTCCCACGGAT TATGAAGTTTTTTCACAACCTGACCTGGATTGGAGTCTGTATCAATCCTGA