Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048347_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:154824112:154825475:-1 gene:Zm00001d048347 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 39 description:Putative NAC domain transcription factor superfamily protein

Sequence

ATGGCAATGACGGCCGGGGCGCCGTCCATGGAGGTGGAGCAGGACCTCCCAGGCTTCCGG
TTCCACCCCACCGAGGAGGAGCTCCTCGGCTTCTACCTCTCCCGCGTCGTCCACGGCAAG
CAGCTCCACTTCGACATCATCGGCACCCTCAACATCTACCGCCACGACCCCTGGGACCTT
CCTGCGATGGCGAAGATCGGGGAGAGGGAGTGGTACTTCTTCGTGCCGCGCGACCGGAAG
GCCGGCAGCGGTGGGCGGCCGAACCGGACGACGGAGCGCGGGTTCTGGAAGGCCACGGGG
TCGGACAGAGCCATCCGGAGCTCCGCCGACGCCAAGCGGGTGATCGGGCTCAGGAAGACG
CTCGTCTTCTACCAGGGGCGCGCCCCGCGCGGCACCAAGACGGACTGGGTCATGAACGAG
TACCGCCTCCCCGACCACGCCGCCGCCGCCGCGCCACCGCCCAAGGAGGACATGGTGCTC
TGCAAGATCTACCGGAAGGCCACCCCACTGAAGGAGCTCGAACAGAGGGCCTCTACCATG
GAGGAGATGCAGAGGCGCAGCGACGCGGCCGAAGCAGCATCAGCATCCCTGGTCCAGGCT
GTAGGCTCCGCCGACGACAACTACCTGTCATCGGGCGACACCCACGACATAAGCGTCCTG
CAGATCCCAGCCTCGTCCTCCCCCGCGCCGTCGGGCGACAGCTACGGCGGGCCCGCGCTC
AGGGAGGCCCAGACGGAAGCCGCGGACGCCACGACGGTCACGGTGGCGTCGGCGTCTCTG
GTGCATGCCGCATGCATGGCAGGCCCGGCAGCGAGGCATGGTGACCTGCCCACCCCGCAG
GTGCCGACGCATCTCGGAGTCGCCGACTGGACGCAGATGCAGGACCCGTTCATGCTGCGC
AGCCTGTGGCAGGACCAGCTCTTCTTCTCCCCCTTAGCCCACCTGCTCTACTGA

Peptide Sequence

PEP ID

Zm00001d048347_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:154824112:154825475:-1 gene:Zm00001d048347 transcript:Zm00001d048347_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 39 description:Putative NAC domain transcription factor superfamily protein

Sequence

MAMTAGAPSMEVEQDLPGFRFHPTEEELLGFYLSRVVHGKQLHFDIIGTLNIYRHDPWDL
PAMAKIGEREWYFFVPRDRKAGSGGRPNRTTERGFWKATGSDRAIRSSADAKRVIGLRKT
LVFYQGRAPRGTKTDWVMNEYRLPDHAAAAAPPPKEDMVLCKIYRKATPLKELEQRASTM
EEMQRRSDAAEAASASLVQAVGSADDNYLSSGDTHDISVLQIPASSSPAPSGDSYGGPAL
REAQTEAADATTVTVASASLVHAACMAGPAARHGDLPTPQVPTHLGVADWTQMQDPFMLR
SLWQDQLFFSPLAHLLY

Transcript Sequence

Transcript ID

Zm00001d048347_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:154824112:154825475:-1 gene:Zm00001d048347 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NAC-transcription factor 39 description:Putative NAC domain transcription factor superfamily protein

Sequence

CCACGCCCTCTCCTCTCCATTCACCACCGCCGATCGTGTTCCAGACTTCCAGTGCAGCAG
CCAGCAAGTAAGCAGAGCAGCCGGCCGTGCGTCCGATCGAGAAGAAGACTCACGGGAGCA
AGCCGTACTGTACCGATGGCAATGACGGCCGGGGCGCCGTCCATGGAGGTGGAGCAGGAC
CTCCCAGGCTTCCGGTTCCACCCCACCGAGGAGGAGCTCCTCGGCTTCTACCTCTCCCGC
GTCGTCCACGGCAAGCAGCTCCACTTCGACATCATCGGCACCCTCAACATCTACCGCCAC
GACCCCTGGGACCTTCCTGCGATGGCGAAGATCGGGGAGAGGGAGTGGTACTTCTTCGTG
CCGCGCGACCGGAAGGCCGGCAGCGGTGGGCGGCCGAACCGGACGACGGAGCGCGGGTTC
TGGAAGGCCACGGGGTCGGACAGAGCCATCCGGAGCTCCGCCGACGCCAAGCGGGTGATC
GGGCTCAGGAAGACGCTCGTCTTCTACCAGGGGCGCGCCCCGCGCGGCACCAAGACGGAC
TGGGTCATGAACGAGTACCGCCTCCCCGACCACGCCGCCGCCGCCGCGCCACCGCCCAAG
GAGGACATGGTGCTCTGCAAGATCTACCGGAAGGCCACCCCACTGAAGGAGCTCGAACAG
AGGGCCTCTACCATGGAGGAGATGCAGAGGCGCAGCGACGCGGCCGAAGCAGCATCAGCA
TCCCTGGTCCAGGCTGTAGGCTCCGCCGACGACAACTACCTGTCATCGGGCGACACCCAC
GACATAAGCGTCCTGCAGATCCCAGCCTCGTCCTCCCCCGCGCCGTCGGGCGACAGCTAC
GGCGGGCCCGCGCTCAGGGAGGCCCAGACGGAAGCCGCGGACGCCACGACGGTCACGGTG
GCGTCGGCGTCTCTGGTGCATGCCGCATGCATGGCAGGCCCGGCAGCGAGGCATGGTGAC
CTGCCCACCCCGCAGGTGCCGACGCATCTCGGAGTCGCCGACTGGACGCAGATGCAGGAC
CCGTTCATGCTGCGCAGCCTGTGGCAGGACCAGCTCTTCTTCTCCCCCTTAGCCCACCTG
CTCTACTGA