Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048320_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:154473801:154480081:-1 gene:Zm00001d048320 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGGCGGTGACCTTTCCCTCTCCCACCCCGCGGTCCCCGCGCCGGCCGGATGCCATTGTG GCTCCTGACCCCTCGTCTGCTGACATGTCGCCCTCCCTCGACTTCGGCGACCCGACCTCC TTCACCGCGCTGCGCGTCCTCACCGACGGGGGTGCCGCCACCCGCCTTCTCCACGAGTGC GTGGCCTACCAGCGCGCCCTCGACGCCCGTCTCGACGCTCTCCTCGCCCGCCGCGCCGAC CTCGACCGCGCCGCTGCTTCGCTCCTCCGCTCCGCCCCACCACTGCTCTCGCTCGCGGCC TCCGACGCCGCCGCGCTTAAGGAGTCCTCCTCCTCCACCGCGGCGCTTGCCGACGCGCTC TCGTCCCGCGTGCGCCACCTTGACGCGGCGCACTCCAGGGCGGACGCCGCGCTGGCGCGC GCCGAGGCCGCGCTCGACCGTTCCCGCGCGCTCGAAGCAACGCGGAGGGCCTTGGCCGCT GACGACCTCGCCGCTGCCGCCACCGCCGCGCACGAATTCCTCGCTATCGACGCTCGGTTC CCCACCGACGACGATCTCCGCCGCGATCTGATTGACATCAAACGTCGCCTCGAGGGGCTC GCGCGTCGGAGGCTAGCGGCGGTCGTCGACGCACAGGACCACCCTGCCGTGCTCCGCCTC GTCCGCCTATTCCCACTGCTCGGACTCGCTGATGAAGGGCTCCAGGTATACGTCGCCTAC CTCAAGAAGGTTGTCGCTCTGCGTGCCCGTGCAGACTTTGAGCACCTCGCCGAGCTGACC TCCGCGACCCAGCCGACCTCTGACCGGCCGGATTTTGTTGGCTGCCTCACTCGTCTCTTT AAGGACATTGTGCTTGCTGTTGAAGAGAATGATGGTGTGCTGCGTGAGCTCAGGGGCGAT GATGTTGCTTATGCCATCATTGAGCTGCAGGAGGAGTGTGATTCGCGGGGCACCCAGATC CTACGCCGTTATGCTGATTACAGGAAGCTTGCACGTCTTGCATCAGATATAAACTCCTAC ACGAAGAACCTCCTTTCAGTCATGGGTTCCATGGCCAGTGCTGCTGGAGGCAATGAAGGG CCTGATCCCAGGGAAATTGAGCTTTATCTTGAGGAGATTCTTGCGTTGACACAGCTTGGG GAGGACTACACTGAATTCATGGTGAATAAGATCCGTGTATTGAGAGATGTGAAACCTGAA CTTGGGCCGCGGGCGATGAAGGCCTTCCGTAATGGTAACTTTAATAAAATGGAGCAGGAT CTGACTGGGTTCTATGTTATCTTCGAGGAATTTTTCATGGTGGAGAATGTGAGGAAAGCC ATACGGATTGATGAGCCCATATCAGATGGTCTCACAACGTCAATGGTGGATGATGTATTC TTTGTACTGCAGAGTTGCTGCCGCCGGGCTACTTCCACTGCAAGCATAAACTCCGTTATT GCTGTGCTTGGTGGGGCAACGAGCCTTCTGAGCAATGAGTATCAGGAGGCACTACAGTGG AGGATGCGGGAGCCAAATTTGGGTGCAAAGCTCTTCCTTGGTGGTGTTGGGGTGCAGAAG ACTGGTGAGGAGATTGCGACTGCACTGAACAACATTGACATTAGCTCCGAGTATGTTCTG AAGCTCCGCCATGAGATTGAGGAGCTCTGTGTAGAGGTGAGTCTAGTATTTTTTTATTAT ATAAATTAG

Peptide Sequence

PEP ID	Zm00001d048320_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:154473801:154480081:-1 gene:Zm00001d048320 transcript:Zm00001d048320_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MAVTFPSPTPRSPRRPDAIVAPDPSSADMSPSLDFGDPTSFTALRVLTDGGAATRLLHEC VAYQRALDARLDALLARRADLDRAAASLLRSAPPLLSLAASDAAALKESSSSTAALADAL SSRVRHLDAAHSRADAALARAEAALDRSRALEATRRALAADDLAAAATAAHEFLAIDARF PTDDDLRRDLIDIKRRLEGLARRRLAAVVDAQDHPAVLRLVRLFPLLGLADEGLQVYVAY LKKVVALRARADFEHLAELTSATQPTSDRPDFVGCLTRLFKDIVLAVEENDGVLRELRGD DVAYAIIELQEECDSRGTQILRRYADYRKLARLASDINSYTKNLLSVMGSMASAAGGNEG PDPREIELYLEEILALTQLGEDYTEFMVNKIRVLRDVKPELGPRAMKAFRNGNFNKMEQD LTGFYVIFEEFFMVENVRKAIRIDEPISDGLTTSMVDDVFFVLQSCCRRATSTASINSVI AVLGGATSLLSNEYQEALQWRMREPNLGAKLFLGGVGVQKTGEEIATALNNIDISSEYVL KLRHEIEELCVEVSLVFFYYIN

Transcript Sequence

Transcript ID	Zm00001d048320_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:154473801:154480081:-1 gene:Zm00001d048320 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ACCACATCAAGAGGCCCAACCGTCGAGAGAGGAAGCAGGAGTACCGAGTACTCCGAGATC TGGCCTGTGTCCACAGCCTTCTCTTCCCTGACCTCGACATCTTGCCGATCTGCACTGACT CCGCGGCCCGCGTTCATGGCGGTGACCTTTCCCTCTCCCACCCCGCGGTCCCCGCGCCGG CCGGATGCCATTGTGGCTCCTGACCCCTCGTCTGCTGACATGTCGCCCTCCCTCGACTTC GGCGACCCGACCTCCTTCACCGCGCTGCGCGTCCTCACCGACGGGGGTGCCGCCACCCGC CTTCTCCACGAGTGCGTGGCCTACCAGCGCGCCCTCGACGCCCGTCTCGACGCTCTCCTC GCCCGCCGCGCCGACCTCGACCGCGCCGCTGCTTCGCTCCTCCGCTCCGCCCCACCACTG CTCTCGCTCGCGGCCTCCGACGCCGCCGCGCTTAAGGAGTCCTCCTCCTCCACCGCGGCG CTTGCCGACGCGCTCTCGTCCCGCGTGCGCCACCTTGACGCGGCGCACTCCAGGGCGGAC GCCGCGCTGGCGCGCGCCGAGGCCGCGCTCGACCGTTCCCGCGCGCTCGAAGCAACGCGG AGGGCCTTGGCCGCTGACGACCTCGCCGCTGCCGCCACCGCCGCGCACGAATTCCTCGCT ATCGACGCTCGGTTCCCCACCGACGACGATCTCCGCCGCGATCTGATTGACATCAAACGT CGCCTCGAGGGGCTCGCGCGTCGGAGGCTAGCGGCGGTCGTCGACGCACAGGACCACCCT GCCGTGCTCCGCCTCGTCCGCCTATTCCCACTGCTCGGACTCGCTGATGAAGGGCTCCAG GTATACGTCGCCTACCTCAAGAAGGTTGTCGCTCTGCGTGCCCGTGCAGACTTTGAGCAC CTCGCCGAGCTGACCTCCGCGACCCAGCCGACCTCTGACCGGCCGGATTTTGTTGGCTGC CTCACTCGTCTCTTTAAGGACATTGTGCTTGCTGTTGAAGAGAATGATGGTGTGCTGCGT GAGCTCAGGGGCGATGATGTTGCTTATGCCATCATTGAGCTGCAGGAGGAGTGTGATTCG CGGGGCACCCAGATCCTACGCCGTTATGCTGATTACAGGAAGCTTGCACGTCTTGCATCA GATATAAACTCCTACACGAAGAACCTCCTTTCAGTCATGGGTTCCATGGCCAGTGCTGCT GGAGGCAATGAAGGGCCTGATCCCAGGGAAATTGAGCTTTATCTTGAGGAGATTCTTGCG TTGACACAGCTTGGGGAGGACTACACTGAATTCATGGTGAATAAGATCCGTGTATTGAGA GATGTGAAACCTGAACTTGGGCCGCGGGCGATGAAGGCCTTCCGTAATGGTAACTTTAAT AAAATGGAGCAGGATCTGACTGGGTTCTATGTTATCTTCGAGGAATTTTTCATGGTGGAG AATGTGAGGAAAGCCATACGGATTGATGAGCCCATATCAGATGGTCTCACAACGTCAATG GTGGATGATGTATTCTTTGTACTGCAGAGTTGCTGCCGCCGGGCTACTTCCACTGCAAGC ATAAACTCCGTTATTGCTGTGCTTGGTGGGGCAACGAGCCTTCTGAGCAATGAGTATCAG GAGGCACTACAGTGGAGGATGCGGGAGCCAAATTTGGGTGCAAAGCTCTTCCTTGGTGGT GTTGGGGTGCAGAAGACTGGTGAGGAGATTGCGACTGCACTGAACAACATTGACATTAGC TCCGAGTATGTTCTGAAGCTCCGCCATGAGATTGAGGAGCTCTGTGTAGAGGTGAGTCTA GTATTTTTTTATTATATAAATTAGTTTATGCCTAAAGTGGGACATGTTTAACAATTAGGC CATATATGCATTCCATCAGTTCAATTTATTGGATATGTGCATATCTTCAGTCATATAATG TGTTCTTAATTGCAGATTGCTTAATTTAAATGCAGTTGATCACAATGTTTTAACATTCCC TGAAAATTAGTTTGATAGTAATAGAGTAAATTTTAGAAACGTAAAAATCTTTATGCTGTG ATAAATCATTTGGCACATAATATTTGTCTAGCTGTTTACACCTACGTTTATCAACAAACC CACGTGAGTTGGTAATAGTGTCTCCTTTGTGCTGCCACCGCCTCTGTCATTTGATCTCTA TGTATCTTATGTAATAGAGAATATCATAACTCACAAAGAATGCATTTCGTTGTCTTTGTA AAATTAATTTGTCATTGCTTGATTCTATCATGCTAATGCACAAATGTTTAGCTTAATGTA TCTGCCATCTAGGAATGCCAAATCGTTAGATGTAAATGCATGAACTAGCAACTTTCTAAG TAGGACACCATTATGTTACACAAATTGATAACAGCATTTTGTGTACTGCTTTATGGCCAC TCTATCATAGGAACTGTTTTTGGGCTTGTCATAGCAAAACCGTTAAACTTAGTGCCAGAT AAACAATTCTGCAAACTAAATCACTAAACTTATTATGTAGAACAAACTGTAATGATAAAT GATGTGTGAAGTATGGACATGGTTATCACAGTGCCACGGCGAAGCGAGTCGCCAGCTGGA CGCCTAGGCGCCCATTTGTCCAGCAGTTAGCATGCAACACATATGATATATCAAATACTA GCAAATAAAATATAGGTCCAACAAGTAGCAAGCAAATATATATGTCCAGGAAATACATGA TAAATTGAATAACTGATAAATATGACATACTGCCCTAAGCCCGTAAGGCCTAATAAATAT TGAAGTCTATCTCATTATGACACCCACATCCTCATCACTTGCAGCTGCAGCAGCTTCACC ATTTGTAGCAAGAGCTTGGCCATAGTCATCCTCAACATGTAGATCATCAGGAGCAACAAA ACCAAATTCAGCTTCTTCCTCTTCTCCTAATCTTTGTTGTTCTTGTTCTAAAATTGTGGT TGTGGTGGATGTTGAAGCAATATATAGCAAGCAATACCAAGTTAGGCAAGCAAGACAATA CCGGCAGCTCAGGTCTCAGGCAAGCAAGATAGTACCAACAAGGAAGAGCAGAGGAGTCGG GACTTCATCTTCGTGCACAGCTGGGGCCTGCAGGTGCTAGGGCAGCTCTGGTGGGTGGTG CGCCGCAGGGAACGCGGGCGTGCGGCGCGGGGGCGGGTGGCCTGAGGAGCGAGGAGCTGG AGTGGGGTGGCCAGAGTTGCGTTTGGTGGCGCTAGCAGCGGTGACAACAGGGGAAAGAAA GAAGAAAGCACAGGTACATGGGCGCATAGGGCACAAGGCATACACACATGGCCCATTGGA GCCCACTTCAGCAGCTAGGCGACGGCACGTTGTCGCCTGGGAGCCTGCCCAGTCGCTGTG GCGTCGTCTAAGTCGGCCAAGGGCCGCCCTAGTTGGGTTCAGGCCAAGGAGCTGGAGTGG GGCGGCCGGAGTTGCGTTTGGCAGCTCTAGTGGCGGTGACAACATGGGAAAGAAAGAAGA GAAAACAAGTACCTGGGCACATAGGGCACAAGACATACACATATGGCCCATTGGAACCCA CTTCAGCAGCTAGGCAATGGTACGACGTCGCCTGGGAGCCTGCCTAGTCGCTGTGGCGTC GTCTAAGTTGGCCAGGCGCTGCCCTAGTTGGGTTCAGGCGAGGTGACAGATCATGGTGTT CGTTGCCGGCCACTGGCACCTAGGTGTCACCTAGGTGACACAGTGACAACAGTGAGTATG GAATGTATGATTGATCCAGCATTCTTGTCTGCGGGAACCTGTGATCTAATGAATAGACTT ATGTAATAGAGAATCTCATAACTCACAAAGAATGCATTTCATTGTCTTTGCAAAATTAGT TTGACATCGCTTGATTCTATCATGCTAATGCACGGTTGTTTAGCTTAATGTGTCTGTCAT CTGGGAAATGCCAAATTGTTAGATGTAAATGCATGAACTAGCAACTTTCTAAGTAGCACA CCTATATGTTACACAATTGATAACAGTGTTTTGTATACTGCTTTATGGTCACTCCTGTCA TAGGAACTGTTTTTTGAGCTCGTCATAACAAAACTGTTAAACTTAGTGCCAGATAAACAA TTTGTGCAAACTAAATCACTAAATTTATTGTGTAGAACAAACAGTAATGATAAATGATGT GTGAAGTATGGAATGTATGATTGATCGAGCATTCTTGTCTATGGGAACCTGTGATCTAAT GAATCGAACAGCTTGCTTATGAGTAATGAGTAATCTTGCAAGCAGAATAATGTACAAAAT GCTAATGCCAAGCAAGATATGCACCAGGACCACCTTAAACTTTTATTGAGCAGTGTCTAA AACAACGCGACAAAAATGAAGCTTGTTTGTGTTTATCTGAAATCCCTTTTGAAAATAGAT CATGAAGCTTGTTTGTGGGGATTCTGCATTCCAGTACATTGTTTAACGTACCTTTCGTTT GCTGAAGGTGTTAGATACCCGTCCCTTGTAATGGGCCTCGCCCAGTTATTTGGTGTATTA ATACACTGCTCATCCCTATCCTAGGGCTAGGGTTTTCCATTCCAACTGGGTTCCAGAGCC AGTTTTACCTTCTCCCAACCCACCCCACAGCCGCCGCCGACCCCCGGGCATCTCTCTGGC CACCGGCTGTCAGCCCTCCCCTTCCTCCCCCGCTGCTGCCCCCCTTCCCCCCTCCCTCCC CCGGGGTCGTAGCCAGGACGCCAGCCGCCGCCGTCCACCCGCTGGCACTGCAGGTCGAGC CAGCAGCCGCGCCACCTGCTGGCCATCGCGCTGTCGCGCCTCCCCACGCCGTATCCCTGC TCTGCCCTCGCCTTCTCTCTTGGGCGGACGGCCGGACCAGCTCCTGCTCGTCCACTCCAG CGCTCCAAGCGGCCGGCGCTGGCGCTGCCTATGTGCCTTCAACCCCCTCCCTAGGCACGC CGCAGGCCCGCAGCGGCCACCGCTGCACCAGCCCCTCGTAATCTTCGCAGCCTCGTCCAT GATGGACTAGGGCAAGTATATTGGTGTTGTCTTGTAGGTGGTCTCGTGTAGTACCATGTA ATCTTGAGTTGAATTATGACACAATCTGTACAATAACTTATCATTTGAGTTGTCTTGTAG TGACTCACATTTACTTAATTTGTGTGTAGAACAAAAGGAATGTTTTGATTTGCATGTCGA CAAGTCATACAATGGTGCAGAAGCAGTCTCATATTCCTAAATCTTAGTTTATGAGGTGGT TGTTTCACGAAACAACAACCTCTTTCTCTCACCCTCCCTCTTCTCGTCCACATCATAAAA AAAAATCCTATGTGGCTTTGTATGAGACCATGTACTTGCCCTAATGGTTCTAAAAAAATC CTATGTGGCTTTGTATGACGTAATGGTGTCATTAATAACTAGTGAGTAGTGATTTGATTG CTGTATCAATATGGTTGATACAAACTCCACTGATTTGTGTCTGTCCAACAGATTTTTCAT ACTCCAGCTGATCGAGAGAAGATCAAGTCCTGTTTATCAGAGCTAGGAGAGATCAGTGCT TCCTTTAAGAAGATCCTTCATTCTGCGCTGGAGCATTTAGTGGCATCTGTGGCGCCACGC ATCCGTCCAATCCTTGACACTGTTGCTACTGTCAGTTATGGGTTGGATGATGCTGAATAT GGGGAAAATGAGGTGAATGATCCATGGGTGCAGAAGCTAATACTTGCAGTTAACACTAAT GTTGCTTGGCTCCAGCCAGTGATGACATCAAACAACTACGATTCCTTTGTGCACTTGATC ATTGACTTCATTGTCAAAAGGCTCGAGGTGATAATGATGCAGAAGAGGTTCAGCCAGCTT GGTGGGCTCCAGCTCGACAAGGAGGTCCGGTCTCTGATCAACCATTTCTCAGAAATGTCC CAGAGACCAGTCAGAGACAAGTTCTCTAGGCTTTCGCAGATGTCGACCATTCTAAACTTT GAGCGGGTATCAGAGATACTGGATTTCTGGGGTGACAATGCTGGCCATCTGACATGGCTG TTGACACCTGCAGAGGTGCGGAGGGTGTTAGGACTTAGGACTGACTTCAGGCCTGAAGCT ATTGCTGCTTTGAGGCTCTGAATCGTGCGTCTATATATACTTGTTAATTCTTCATATATG ATAGAGCAACAAGATGTCTTAGAATTTTTTGTTACAATGACAAACACCTGCATTGTAAAG AAATCTGTGAACATACTTTTTGT