Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048315_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:9:154450418:154453803:-1 gene:Zm00001d048315 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase
Sequence	ATGGCATCCTCCTCTTCCTTGGCCTCCGCCAAAGCCCTAGCACGCTCCCACGCGTCCCTC CTCGCGCCCCAAACCCAGAGAACAGTGGTCGCGCCAGCGCCGTCGCGCTCGCGCCGCGCC TCCGTCAGGATGCGCGCCTCTGCTGCCGCGCCGGCGGAGCCGAAGAAGACCGTCTGGGTG TGGACCGAGAGCCGGCAGGTGATGACGGCGGCCGTGGAGAGGGGGTGGAGCACTTTCCTC TTCGGATCCAAAGACCTCGGCAAGGACTGGTCATCAACCGCTCGCATAAATGCTCTCTTC ATTGACGGTCCAGGGATTTTCGATGAGGAGAACCAGAAGGTTGCTGTAATTTCACAAGTC TCTTCGCCCGGTGAACTTGACCTTGTACAACCGGACAACGCCGAAGCCGAGAACATTGTC ATAGACTTTCGAGGTGGCTGGCAGGTTATACGGGCAGAAAATATAGTTGCTGCATTCCAA GGATGTAAAGGAAATGTATTGGCTGTATCAACGAACACAACTGAGGCGCAAGTTTTTCTT GAGGCCTTGGAGCAAGGGCTTGATGGAGTTGTACTTAAAGTAGATGACATGGATGATATC ATTAAGCTCAAGGATTATTTTGATCGAAGGAACGAGGCAAAGAGTCAATTACCATTGACA AAGGCTACTGTAACAAAGGTCGAGGTTGTTGGTATGGGTGATCGTGTTTGTGTGGATCTT TGCAGTATCATGCGACCTGGCGAAGGCCTTCTGGTTGGATCGTATGCCAGAGGAATGTTT CTTGTTCATTCTGAATGCTTGGAGACTAATTACATTGCAAGCAGGCCTTTCAGAGTCAAT GCGGGGCCTGTACATGCATATGTCACCGTTCCTGGTGGCAAGACAAGCTACCTCTCAGAG TTGGGGTCAGGAAAGGAAGTCATCGTGATCAATCAGAGTGGGCTATGGCGTACTGCAATT GTCGGTCGTGTGAAGATCGAATCAAGGCCTCTGATCCTTGTAGAAGCGAAGGATAACTCT GGAGACGAGACGTATAGCATTTTTCTACAAAACGCAGAAACAGTTGCACTTATTACCCCT AACACAGGATCAAGTGGAAGGACCGCCATTCCCGTGACTTCGCTGAAAGTCGGTGATGAA GTTCTGGTGAGGAAACAGGGCGCCGCCCGTCACACTGGGATAGAGATTCAGGAGTTTATT GTTGAGAGATGA

Peptide Sequence

PEP ID	Zm00001d048315_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:9:154450418:154453803:-1 gene:Zm00001d048315 transcript:Zm00001d048315_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase
Sequence	MASSSSLASAKALARSHASLLAPQTQRTVVAPAPSRSRRASVRMRASAAAPAEPKKTVWV WTESRQVMTAAVERGWSTFLFGSKDLGKDWSSTARINALFIDGPGIFDEENQKVAVISQV SSPGELDLVQPDNAEAENIVIDFRGGWQVIRAENIVAAFQGCKGNVLAVSTNTTEAQVFL EALEQGLDGVVLKVDDMDDIIKLKDYFDRRNEAKSQLPLTKATVTKVEVVGMGDRVCVDL CSIMRPGEGLLVGSYARGMFLVHSECLETNYIASRPFRVNAGPVHAYVTVPGGKTSYLSE LGSGKEVIVINQSGLWRTAIVGRVKIESRPLILVEAKDNSGDETYSIFLQNAETVALITP NTGSSGRTAIPVTSLKVGDEVLVRKQGAARHTGIEIQEFIVER

Transcript Sequence

Transcript ID	Zm00001d048315_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:154450418:154453803:-1 gene:Zm00001d048315 gene_biotype:protein_coding transcript_biotype:protein_coding description:3-dehydroquinate synthase
Sequence	GACGACAGAAAAAAAAAGGCTCTTCCGATGATTCAGCCATCACAATGGCATCCTCCTCTT CCTTGGCCTCCGCCAAAGCCCTAGCACGCTCCCACGCGTCCCTCCTCGCGCCCCAAACCC AGAGAACAGTGGTCGCGCCAGCGCCGTCGCGCTCGCGCCGCGCCTCCGTCAGGATGCGCG CCTCTGCTGCCGCGCCGGCGGAGCCGAAGAAGACCGTCTGGGTGTGGACCGAGAGCCGGC AGGTGATGACGGCGGCCGTGGAGAGGGGGTGGAGCACTTTCCTCTTCGGATCCAAAGACC TCGGCAAGGACTGGTCATCAACCGCTCGCATAAATGCTCTCTTCATTGACGGTCCAGGGA TTTTCGATGAGGAGAACCAGAAGGTTGCTGTAATTTCACAAGTCTCTTCGCCCGGTGAAC TTGACCTTGTACAACCGGACAACGCCGAAGCCGAGAACATTGTCATAGACTTTCGAGGTG GCTGGCAGGTTATACGGGCAGAAAATATAGTTGCTGCATTCCAAGGATGTAAAGGAAATG TATTGGCTGTATCAACGAACACAACTGAGGCGCAAGTTTTTCTTGAGGCCTTGGAGCAAG GGCTTGATGGAGTTGTACTTAAAGTAGATGACATGGATGATATCATTAAGCTCAAGGATT ATTTTGATCGAAGGAACGAGGCAAAGAGTCAATTACCATTGACAAAGGCTACTGTAACAA AGGTCGAGGTTGTTGGTATGGGTGATCGTGTTTGTGTGGATCTTTGCAGTATCATGCGAC CTGGCGAAGGCCTTCTGGTTGGATCGTATGCCAGAGGAATGTTTCTTGTTCATTCTGAAT GCTTGGAGACTAATTACATTGCAAGCAGGCCTTTCAGAGTCAATGCGGGGCCTGTACATG CATATGTCACCGTTCCTGGTGGCAAGACAAGCTACCTCTCAGAGTTGGGGTCAGGAAAGG AAGTCATCGTGATCAATCAGAGTGGGCTATGGCGTACTGCAATTGTCGGTCGTGTGAAGA TCGAATCAAGGCCTCTGATCCTTGTAGAAGCGAAGGATAACTCTGGAGACGAGACGTATA GCATTTTTCTACAAAACGCAGAAACAGTTGCACTTATTACCCCTAACACAGGATCAAGTG GAAGGACCGCCATTCCCGTGACTTCGCTGAAAGTCGGTGATGAAGTTCTGGTGAGGAAAC AGGGCGCCGCCCGTCACACTGGGATAGAGATTCAGGAGTTTATTGTTGAGAGATGAAAAT GGAAACGCTGAATGCACCAGTTTCACGTCGTTTTGAACAAAAAAATGATGTATGATTGCA ACATTCATCTGTTCTGTTGG