Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048299_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:154130899:154134123:-1 gene:Zm00001d048299 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTTCCTGGAGCCCAAGGACATCGACTGGAGCAGGGTGGTGTCGCAGTACGTGCGC
GACGAGACCTACGAGGGCATCGAGGCCCCGCACTGGGCCGACCTCTCCGACCCCAACGCC
GGCCGCGCCGCCGTCGACGACGAGGCCTGGTTTTGCCGCCCCGATTGCCAGCATCCGAAG
ACGGCCGAGGATTTCTTCAAGCTGAGCCCCAGCCCCAAGGGCAAGCTGCTGCGATCGGTT
TCCGCCATGCTGCCGTTCGCCGAAAGGGACGCCAACGCCACCAACCTCAGGGACGGCAGT
AGCAACCTCAAGTGGCGGGGTGGCGGCGCCGTTGCTGCCTCCACGCCGCCGAAGCCAAAG
GCAGCGCCCAAGAAGAGGTTCCAGGAGGATAGCGAGAACCATGACCCTGCGCTGGCCACG
CCGCCCCCACGGCAGGCGCCAAGTAGGCCGCCGTTCGGCGCCCCTCGGTGGAACAAGAAT
GCCAAGGAGGCCATCAAGTCCAGTGCGGAGAAGCGGCCGGACAATGCTGAGAAGGAGGCG
CTGCTCAATAAGCACGTCCCGCCGAGGCAGCTCAAGAGCACCCTCTCAGCGAGGAACCTC
TTCTCTGGAAAGGATATACTTGGCCAGATTTCGGAGTTCTACGATGAGCTGAAGCGGATG
GTTGGTGGTGGCGTCGGCCGGCCTGTCACAGACACACAGGAGGAGCACAGCTCAGACCCA
GTGAATCCGAGCTATTTGATGGAGAAGGTGGCTCCTGATGAGACAGTGAAGGAGGAGGCG
AGACAAGAAACGGCGAAAAAGAGTCCAAGCCCAATGTAA

Peptide Sequence

PEP ID

Zm00001d048299_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:154130899:154134123:-1 gene:Zm00001d048299 transcript:Zm00001d048299_T003 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEFLEPKDIDWSRVVSQYVRDETYEGIEAPHWADLSDPNAGRAAVDDEAWFCRPDCQHPK
TAEDFFKLSPSPKGKLLRSVSAMLPFAERDANATNLRDGSSNLKWRGGGAVAASTPPKPK
AAPKKRFQEDSENHDPALATPPPRQAPSRPPFGAPRWNKNAKEAIKSSAEKRPDNAEKEA
LLNKHVPPRQLKSTLSARNLFSGKDILGQISEFYDELKRMVGGGVGRPVTDTQEEHSSDP
VNPSYLMEKVAPDETVKEEARQETAKKSPSPM

Transcript Sequence

Transcript ID

Zm00001d048299_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:154130899:154134123:-1 gene:Zm00001d048299 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCACGGCAGGACGCAGGGGATAACAGAGAGGGGGGCCGCGCGGGAGGGAAGGGGAGGGCG
GGATGGAGTTCCTGGAGCCCAAGGACATCGACTGGAGCAGGGTGGTGTCGCAGTACGTGC
GCGACGAGACCTACGAGGGCATCGAGGCCCCGCACTGGGCCGACCTCTCCGACCCCAACG
CCGGCCGCGCCGCCGTCGACGACGAGGCCTGGTTTTGCCGCCCCGATTGCCAGCATCCGA
AGACGGCCGAGGATTTCTTCAAGCTGAGCCCCAGCCCCAAGGGCAAGCTGCTGCGATCGG
TTTCCGCCATGCTGCCGTTCGCCGAAAGGGACGCCAACGCCACCAACCTCAGGGACGGCA
GTAGCAACCTCAAGTGGCGGGGTGGCGGCGCCGTTGCTGCCTCCACGCCGCCGAAGCCAA
AGGCAGCGCCCAAGAAGAGGTTCCAGGAGGATAGCGAGAACCATGACCCTGCGCTGGCCA
CGCCGCCCCCACGGCAGGCGCCAAGTAGGCCGCCGTTCGGCGCCCCTCGGTGGAACAAGA
ATGCCAAGGAGGCCATCAAGTCCAGTGCGGAGAAGCGGCCGGACAATGCTGAGAAGGAGG
CGCTGCTCAATAAGCACGTCCCGCCGAGGCAGCTCAAGAGCACCCTCTCAGCGAGGAACC
TCTTCTCTGGAAAGGATATACTTGGCCAGATTTCGGAGTTCTACGATGAGCTGAAGCGGA
TGGTTGGTGGTGGCGTCGGCCGGCCTGTCACAGACACACAGGAGGAGCACAGCTCAGACC
CAGTGAATCCGAGCTATTTGATGGAGAAGGTGGCTCCTGATGAGACAGTGAAGGAGGAGG
CGAGACAAGAAACGGCGAAAAAGAGTCCAAGCCCAATGTAATTTGCAAATAGTCATCCCA
GAAGGGAAAGAAAGTGGGGCTGAAGGTGGAAGCAGGGAAGCAAAGGTCTCCCTCTGTGCT
GAAGGAGGTGAGGGCAACGCCGCCGACTCCACAGCGGTTTCTATCCCCATCGCCAAACCG
CATTAAGAATGTTAAACCTGGAGGGATGTCCACAGCAGGCTCGCCACTCAAAAAGGCACC
AAAGTTGCTTACTCAGTGTCCATGGCTTTAGATCATGGAGTTTACTTGGTGAAATTTTCG
TTCTTAATTTCTGGCACTTCAAATTCTTCAAGGGCATCTAATGTTCACAAGAAGCATGGT
CCTCTTTTGTAAATCTTAGTATGGAAGAATACCTTAGCGTGACTACGGACTAAAAAATAA
ATGATTGGTTACGACTGATTCTTCCCCTGATGATCTAATAAATCCTACGATGAGCTAAAT
TGGTATTGCGAGTTCAATAAAAGTTTCAGTTAAATCTGATTATGCAGCTGAGATGATTTT
GTACAGAAGTTGCATCCTTTCATTTTTTTTCTCGAAAAACGCAGGAGGACCGCGCCTCAT
TATATTAAGTAGGAGCATCCTTTCATACTTAGCATCATTTAGCACATGCCATGAGGAGAT
GTTACCTAATGTACTAATGATATGGCAAGGCATGGTTTCTAAGTTTTGATAAATTCTTCA
TTACCTTAGTATTCATTGTAAGCCTCATAGTGGATAGTCTCGAATAGGTTTCTCACTTTA
TCTTATGTTCACTGTGGATGATCACATCATACTGCTTGCACATTTCATAATTGAATTCAT
CTTTTTTGTACTGTACAAAAAGCAAACACAGTGATTTTATAGTTCTAGGGCTCTTGTGCC
CACCCATTACTAATGAGCTATTTATCTGAAGTTGGTCACACAGATATCTAACTATACTGT
AACTACCTTTTCTTTAGGAGAAGGGGACACCTAGTAAGGACCTGGAGAGCAAAAAAGATG
CTGTGAGGCAACCCTTTGGTGTTAAGGATATGAACAATACAAGAGCAGCGTGTGATGCAG
AAGGGAGCTCCAGCAGCATGTTTTGGTTCTTGAAGCCCTGCACTTTCCTTGTGGAGTAGC
GTCATAACACTACAATTTTTTAACGAGCAACACTTGATATAGTTAGAATCCATTACTTCA
TTCATTTCCAAATATTCTCTGTTCCTATTTGATTGATTCATTTCATGGGTACTCTATACG
GGAAGTAAACAAAAAGAATCATGTATAGTCATACAGGTTGAAAGTCTTCTCCATATGTAT
AATTCGAGATATAGCAAAACGTGGTTCTGCTGCTTTGTCGTTTGTTCAAATAAACTGCAT
TTTTTTGTCCCTTGAAGTGATATACTGAGGTT