Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048285_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:9:153886181:153889081:-1 gene:Zm00001d048285 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SPL2
Sequence	ATGTCGGCGCGTGACCGCGAGACGGCCGAGGCGCTGGTGCGCCTCGCCGCCTCGCTGGAC GGGGCGGTGCTCGGCCTCGGCACGGCTGCCGTCGCCGTCGCGTCGTGGGTCAAGTACCTC GCCGTCTCGGGGCAGCTACGCCTCGTCGCCTCCGCGGCGACGGCCTCCATCGCCGACGCC CGCTCCCTCCTCTCAGGCGACGGCGCCGAGCCGCGGATCGCCGCGGTGCGGGGCTACGTG CGGGCCCATGACAAGTTCTTCCGGGCCCCGTTCTCAGGCGAGGCGGGCGTCGTCACGAAG CACACCCAGATGTGTTTGTTCACAGAATGGAGAGGCATCTTTGGATGGACCTTTGATCTG CATGCTCTTCTTTTCAGATCATGGAAAGAGCAAATTGTGACGTCTTTTAGATCGGTTCCA TTTGTTCTGGTTAGTACTGAATTAGGAAATCCTACGGGAGTGGTACATATAAATGTGGAT AAGGCGGATCAACCGTTGCCTCTTACCACAGTGTTTCATAAACTTATCCCACTTGAGACG ACTCCTTACACATTGTTTCAAACTATTATTGGCAACGGCTATCCGATTGCGTTGTTGGAT GAAGAAAAAATACTACCGATTGGTAAGAAAATTACAGCAATAGGACTATGTCAAGCAAAG GATGCAGAAAGTGTTGAGATAACATCGTGCCCAGAGATCCCCTTTTTCTTATCTGAACTA ACCAAGGATGAGATGCAAGCTCAGCTGGCTTCACGTGCTAGGATACTCTTCTGGGGTAGT ATTGTTTTGGGAACCTTGTCGGTTTGCCTAGTGGGCCATGCCATTTACAGGGGCTGGACG AGAATCAAACTACGAAGAGAGGCTAGGCATGCACGACAGATGTTTGAGGAGGCTGAAGAT GCTATTCACAGGGATGACTCTAGTGATGATGATGAAATAGGAGACGGGCAACTATGTGTT GTGTGCTTAAGGAAGAGAAGGAGGGCAGCTTTTATTCCATGTGGGCATCTTGTCTGCTGT TCCGAATGCGCATTAACAATAGAGCGTACACCTCATCCATTGTGCCCTATGTGTCGTCAA GACATCAGATACATGATGAGGGTTTATGACTCTTGA

Peptide Sequence

PEP ID	Zm00001d048285_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:9:153886181:153889081:-1 gene:Zm00001d048285 transcript:Zm00001d048285_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SPL2
Sequence	MSARDRETAEALVRLAASLDGAVLGLGTAAVAVASWVKYLAVSGQLRLVASAATASIADA RSLLSGDGAEPRIAAVRGYVRAHDKFFRAPFSGEAGVVTKHTQMCLFTEWRGIFGWTFDL HALLFRSWKEQIVTSFRSVPFVLVSTELGNPTGVVHINVDKADQPLPLTTVFHKLIPLET TPYTLFQTIIGNGYPIALLDEEKILPIGKKITAIGLCQAKDAESVEITSCPEIPFFLSEL TKDEMQAQLASRARILFWGSIVLGTLSVCLVGHAIYRGWTRIKLRREARHARQMFEEAED AIHRDDSSDDDEIGDGQLCVVCLRKRRRAAFIPCGHLVCCSECALTIERTPHPLCPMCRQ DIRYMMRVYDS

Transcript Sequence

Transcript ID	Zm00001d048285_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:153886181:153889081:-1 gene:Zm00001d048285 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase SPL2
Sequence	AAAACCACTGGAGGAGCACCAAGAGTTATCTCCGGCTCGAACCCGAGCCAGGTCCTGACT CCTGATCCGCACCGCACACGGCAAGGGGGCATCGCCGACGGGCCGTCAGCGGCGAGACCC AAGCCAACACAGCCCAGCGATGTCGGCGCGTGACCGCGAGACGGCCGAGGCGCTGGTGCG CCTCGCCGCCTCGCTGGACGGGGCGGTGCTCGGCCTCGGCACGGCTGCCGTCGCCGTCGC GTCGTGGGTCAAGTACCTCGCCGTCTCGGGGCAGCTACGCCTCGTCGCCTCCGCGGCGAC GGCCTCCATCGCCGACGCCCGCTCCCTCCTCTCAGGCGACGGCGCCGAGCCGCGGATCGC CGCGGTGCGGGGCTACGTGCGGGCCCATGACAAGTTCTTCCGGGCCCCGTTCTCAGGCGA GGCGGGCGTCGTCACGAAGCACACCCAGATGTGTTTGTTCACAGAATGGAGAGGCATCTT TGGATGGACCTTTGATCTGCATGCTCTTCTTTTCAGATCATGGAAAGAGCAAATTGTGAC GTCTTTTAGATCGGTTCCATTTGTTCTGGTTAGTACTGAATTAGGAAATCCTACGGGAGT GGTACATATAAATGTGGATAAGGCGGATCAACCGTTGCCTCTTACCACAGTGTTTCATAA ACTTATCCCACTTGAGACGACTCCTTACACATTGTTTCAAACTATTATTGGCAACGGCTA TCCGATTGCGTTGTTGGATGAAGAAAAAATACTACCGATTGGTAAGAAAATTACAGCAAT AGGACTATGTCAAGCAAAGGATGCAGAAAGTGTTGAGATAACATCGTGCCCAGAGATCCC CTTTTTCTTATCTGAACTAACCAAGGATGAGATGCAAGCTCAGCTGGCTTCACGTGCTAG GATACTCTTCTGGGGTAGTATTGTTTTGGGAACCTTGTCGGTTTGCCTAGTGGGCCATGC CATTTACAGGGGCTGGACGAGAATCAAACTACGAAGAGAGGCTAGGCATGCACGACAGAT GTTTGAGGAGGCTGAAGATGCTATTCACAGGGATGACTCTAGTGATGATGATGAAATAGG AGACGGGCAACTATGTGTTGTGTGCTTAAGGAAGAGAAGGAGGGCAGCTTTTATTCCATG TGGGCATCTTGTCTGCTGTTCCGAATGCGCATTAACAATAGAGCGTACACCTCATCCATT GTGCCCTATGTGTCGTCAAGACATCAGATACATGATGAGGGTTTATGACTCTTGAGTTTT GGAAACTTTGGTCTCAACCAAAGTTTTTCTCCGTAAAGAGAGCGCTAGCTGGGTCCCACT CTGGCTGATTGGTCTCAACCAAAGTTTTTCCCAAACACCTTGATGTATTGGATACTGTTG TATTCGAAAACTGAAGCATTGTAAACTGTAGTAATATCATGACTAAAGTATACTTTAGTA TTTGAAAAACTACAGTTTGGAAAAACTGTGTTCCCAAACAGGGCCTTAGTATTTTATAAA GATGACTCACTGTTTTATC