Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048271_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:153586355:153591283:1 gene:Zm00001d048271 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

ATGAGCCGCGGCACGGGCGCGGGTTATGACCGCCACATCACCATTTTCTCCCCTGAGGGA
CGCCTGTACCAAGTCGAGTACGCGTTCAAGGCGGTGAAGTCGGCGGGTGTCACGTCGATC
GGCGTCCGCGGCGCGGACTCCGTCTGCGTCGTCACCCAGAAGAAAGTCCCGGACAAGTTG
CTGGATCAGACGAGCGTGACACACTTGTTCCCGATCACCAAGTACGTCGGATTGCTTGCC
ACTGGCCTCACAGCTGATGCAAGGTCATTGGTTTCCCAAGCAAGGAACGAAGCAGCTGAG
TTTCGTTTCAAATGGGGCTATGAGATGCCAGTTGATGTGTTAGCAAAATGGATTGCTGAC
AAAGCTCAAGTTTACACGCAACATGCATACATGAGACCCCTTGGAGTAGTTGCTATGGTC
TTGGGCTACGACGAAGAGAAAAATGCACAACTATTCAAATGCGACCCTGCGGGTCACTTC
TTTGGACATAAGGCAACTAGTGCCGGGCTCAAGGAGCAGGAAGCAATAAATTTTTTGGAG
AAGAAAATGAAGGATGACCCGAAATTCACCTATGATGAAACTGTTCAGATTGCAATATCT
GCATTGCAATCAGTTCTCCAGGAAGATTTCAAGGCCACTGAGATCGAAGTTGGTGTTGTG
AGAAAAGAAGAACGTCTTTTCAGAGTTCTCACAACAGAGGAGATTGACCAGCACCTGACG
GCAATTAGTGAACGGGACTGA

Peptide Sequence

PEP ID

Zm00001d048271_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:153586355:153591283:1 gene:Zm00001d048271 transcript:Zm00001d048271_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGADSVCVVTQKKVPDKL
LDQTSVTHLFPITKYVGLLATGLTADARSLVSQARNEAAEFRFKWGYEMPVDVLAKWIAD
KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE
KKMKDDPKFTYDETVQIAISALQSVLQEDFKATEIEVGVVRKEERLFRVLTTEEIDQHLT
AISERD

Transcript Sequence

Transcript ID

Zm00001d048271_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:153586355:153591283:1 gene:Zm00001d048271 gene_biotype:protein_coding transcript_biotype:protein_coding description:Proteasome subunit alpha type

Sequence

AACTCTACTTTTCTTGCGGAGTAAGAAGAGTGGCGGCGGCGGGCCGGCGGCGTGTATAGG
CGTGTTCCCGAGCAGAGGCCCCCCCAAACGCGCAGCGCACACAAACACACACCAGCCCAG
CTCCGAGAGATCATCCGGCGGCCGGCGAGATGAGCCGCGGCACGGGCGCGGGTTATGACC
GCCACATCACCATTTTCTCCCCTGAGGGACGCCTGTACCAAGTCGAGTACGCGTTCAAGG
CGGTGAAGTCGGCGGGTGTCACGTCGATCGGCGTCCGCGGCGCGGACTCCGTCTGCGTCG
TCACCCAGAAGAAAGTCCCGGACAAGTTGCTGGATCAGACGAGCGTGACACACTTGTTCC
CGATCACCAAGTACGTCGGATTGCTTGCCACTGGCCTCACAGCTGATGCAAGGTCATTGG
TTTCCCAAGCAAGGAACGAAGCAGCTGAGTTTCGTTTCAAATGGGGCTATGAGATGCCAG
TTGATGTGTTAGCAAAATGGATTGCTGACAAAGCTCAAGTTTACACGCAACATGCATACA
TGAGACCCCTTGGAGTAGTTGCTATGGTCTTGGGCTACGACGAAGAGAAAAATGCACAAC
TATTCAAATGCGACCCTGCGGGTCACTTCTTTGGACATAAGGCAACTAGTGCCGGGCTCA
AGGAGCAGGAAGCAATAAATTTTTTGGAGAAGAAAATGAAGGATGACCCGAAATTCACCT
ATGATGAAACTGTTCAGATTGCAATATCTGCATTGCAATCAGTTCTCCAGGAAGATTTCA
AGGCCACTGAGATCGAAGTTGGTGTTGTGAGAAAAGAAGAACGTCTTTTCAGAGTTCTCA
CAACAGAGGAGATTGACCAGCACCTGACGGCAATTAGTGAACGGGACTGAGCTGCCATAT
GTTGGACATTTGATCCCTCCACACTGCGCCGTGCCATTGTGCTTCAGCACTGCCATTTAG
TTTGACATCAAATGAACTGAGTGTACCATTTCATGTCTAACACTGAAAACAAGCTCGTTG
ATTGAATTTGGCACAGTTTGGTTTTGCATTGCTAACTATATTTGCAGGGCTGAGCGATTG
GTAGTTCATTTCACCAATACGCGTAACCATTTTTAACGGTGT