Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048247_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:153133378:153141097:-1 gene:Zm00001d048247 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leucine-rich transmembrane protein kinase2 description: leucine-rich transmembrane protein kinase2
Sequence	ATGGAAGAACAATTTGAACAGCATCAGCCGTTCACTTCCTTCCCTTCAAATGAAGTTAAC GACATGAAGCCTATCTATGAGTCCACCACAGTAGACATAGAGTCTTTGGCTTCACCTGCT TCGATTAATCTGAAACCACCCCCGAAGATAGAACAGAACAAATCATTTGATGATGATGAT GATTTTTCAAACAAGACTGCTGCAAATAGAAGTAATATAACACCTATGAAGGCAACTGTT TATTCAGTTGCAGATCTACAGATGGCAACAGATAGCTTCAGCTTCGATAACCTTGTTGGA GAGGGTACTTTTGGACGTGTTTACAGGGCACAGTTCAATGGTGGAAAGGTTCTGGCCATC AAGAAATTAGACATTACTGTGATGCCATTTCAATCGTCTGATGACTTTGCTGAACTGGTC TCGAACATTTCAAAATTGCACCATCCGAATCTGAATGAGCTTGTAGGCTATTGCATGGAA CATGGCCAGCACTTGCTTGTGTATGATTTCCATAGGAATGGATCGCTTCATGATCTACTC CACCTTTCAGATGAGTACAGCAAGGCACTTAGCTGGAACTCTCGCATCAAGATCGCACTC GGCTCTGCCCGTGCACTGGAGTACCTTCATGAAATATGTTCTCCATCCATCATCCATAAG AATTTCAAGGCATCAAATATTTTGCTGGACTCAGAATTCAATCCACACCTTTCAGATACT GGACTTGCAAGCTTCATTCCTGATGCTGAATTCCAGGCAGCAGAACAAAGTGCCGGATAC ACTGCCCCAGAAGTGGACATGACCGGTCAGTACACCCTCAAGAGTGATGTTTACAGCTTT GGAGTTGTCATGCTTGAGCTACTGACAGGACGTAGACCATTTGACAGCTCTAGACCCAGG TCAGAGCAGTCACTTGTGCGGTGGGCAGCACCTCAGCTGCATGACATCGATGCATTGGAC AGAATGGTCGATCCTGCACTCAAGGGTCTATACCCAGCCAAATCTCTATCCCGATTTGCT GATGTCCTCGCCCTGTGTGTCCAGCCTGAACCAGAATTCAGGCCACCAATGTCAGAGGTG GTGCAAGCATTGGTTCGACTTGTGCAGAGGGCCAACATGACGAAGAGGATGCTTGATGGA GGAGATACTTCTCGTGGACCAGATGATCAGGACCAATATTTCATATGA

Peptide Sequence

PEP ID	Zm00001d048247_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:153133378:153141097:-1 gene:Zm00001d048247 transcript:Zm00001d048247_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leucine-rich transmembrane protein kinase2 description: leucine-rich transmembrane protein kinase2
Sequence	MEEQFEQHQPFTSFPSNEVNDMKPIYESTTVDIESLASPASINLKPPPKIEQNKSFDDDD DFSNKTAANRSNITPMKATVYSVADLQMATDSFSFDNLVGEGTFGRVYRAQFNGGKVLAI KKLDITVMPFQSSDDFAELVSNISKLHHPNLNELVGYCMEHGQHLLVYDFHRNGSLHDLL HLSDEYSKALSWNSRIKIALGSARALEYLHEICSPSIIHKNFKASNILLDSEFNPHLSDT GLASFIPDAEFQAAEQSAGYTAPEVDMTGQYTLKSDVYSFGVVMLELLTGRRPFDSSRPR SEQSLVRWAAPQLHDIDALDRMVDPALKGLYPAKSLSRFADVLALCVQPEPEFRPPMSEV VQALVRLVQRANMTKRMLDGGDTSRGPDDQDQYFI

Transcript Sequence

Transcript ID	Zm00001d048247_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:153133378:153141097:-1 gene:Zm00001d048247 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:leucine-rich transmembrane protein kinase2 description: leucine-rich transmembrane protein kinase2
Sequence	TTAATGTCCTCAATACGCTCTTCACCAGTCTGAATTCTCCTGGGCAGCTCAGAGCTTGGC AGGCGAATGGCGGTGATCCTTGTGGCCAGTCATGGCAGGGCATTACTTGCTCAGGATCAG GGGTCACTAAAATCCTATTACCAAACTTGTCACTCACCGGAAATCTGGCCTACAACATGA ATAACTTGGGTTCATTAGTTGAGCTTGACTTGAGCCAAAATAACCTTGGTGGTGGAGGCC AAATACAGTACAATCTTCCCAATGTGAAGCTTGAGAAACTCAATCTTGCAGGAAATCAAT TTGGTGGAAATTTACCCTACTCAATTTCGACGATGCCTAATCTTAAGTATTTAAACCTTA ATCATAACCAACTACAAGGAAACATCACTGATGTATTTTCCAACCTTTATAGTTTGTCAG AGCTGGATCTCTCCTTTAATTCTCTTACTGGTGATCTACCACAAAGTTTCACTGGATTGT CAAGCCTGAAAAGAATGTATTTGCAGAACAACCAATTTACTGGTTATATCAATGTCTTAG CCAACCTTCCCCTTGAAACCCTGTGAGTAATCAACTACCATTGGAATGGCGCGGGTCAGA ATGATGATGGTTCATCAAGTTCTGGTGGAAGACCTGGGATAGGTGGTGGAGGTGTAGCAG GAATCATTATATCATTGCTGATTGTTGGATCAGTTGTTGCATTTTTTCTAATCAAAAGAA GAAAACACAAAGCTATTATGGAAGAACAATTTGAACAGCATCAGCCGTTCACTTCCTTCC CTTCAAATGAAGTTAACGACATGAAGCCTATCTATGAGTCCACCACAGTAGACATAGAGT CTTTGGCTTCACCTGCTTCGATTAATCTGAAACCACCCCCGAAGATAGAACAGAACAAAT CATTTGATGATGATGATGATTTTTCAAACAAGACTGCTGCAAATAGAAGTAATATAACAC CTATGAAGGCAACTGTTTATTCAGTTGCAGATCTACAGATGGCAACAGATAGCTTCAGCT TCGATAACCTTGTTGGAGAGGGTACTTTTGGACGTGTTTACAGGGCACAGTTCAATGGTG GAAAGGTTCTGGCCATCAAGAAATTAGACATTACTGTGATGCCATTTCAATCGTCTGATG ACTTTGCTGAACTGGTCTCGAACATTTCAAAATTGCACCATCCGAATCTGAATGAGCTTG TAGGCTATTGCATGGAACATGGCCAGCACTTGCTTGTGTATGATTTCCATAGGAATGGAT CGCTTCATGATCTACTCCACCTTTCAGATGAGTACAGCAAGGCACTTAGCTGGAACTCTC GCATCAAGATCGCACTCGGCTCTGCCCGTGCACTGGAGTACCTTCATGAAATATGTTCTC CATCCATCATCCATAAGAATTTCAAGGCATCAAATATTTTGCTGGACTCAGAATTCAATC CACACCTTTCAGATACTGGACTTGCAAGCTTCATTCCTGATGCTGAATTCCAGGCAGCAG AACAAAGTGCCGGATACACTGCCCCAGAAGTGGACATGACCGGTCAGTACACCCTCAAGA GTGATGTTTACAGCTTTGGAGTTGTCATGCTTGAGCTACTGACAGGACGTAGACCATTTG ACAGCTCTAGACCCAGGTCAGAGCAGTCACTTGTGCGGTGGGCAGCACCTCAGCTGCATG ACATCGATGCATTGGACAGAATGGTCGATCCTGCACTCAAGGGTCTATACCCAGCCAAAT CTCTATCCCGATTTGCTGATGTCCTCGCCCTGTGTGTCCAGCCTGAACCAGAATTCAGGC CACCAATGTCAGAGGTGGTGCAAGCATTGGTTCGACTTGTGCAGAGGGCCAACATGACGA AGAGGATGCTTGATGGAGGAGATACTTCTCGTGGACCAGATGATCAGGACCAATATTTCA TATGACAAGCTGAACTCATTGTATTTATCTCGTCTCGTTCCACTAGCGCCCGGCAGAGAC ATAATCACACAAGTGGAAGAAACAGAACTTTGTCAGCTTCGCCAGTACTTGGTAGCAAAT GAGTTGTGCTCTATGGTTGATGGTTGTATTGTGTCTAGGAAACAGTATCTTGATCTTGCA CTAATGACATTCTGTTATATTCTTTGGGTAGATTATATGCAAATGCCCCGGATAAATAAA ACTATGGTGTCAAGTTTGCGGAATGT