Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048205_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:152408526:152412651:-1 gene:Zm00001d048205 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	ATGGAAGACTTTTGTGCGGTGTGCGCAGATACGCTGGAGTGGGTGGCCTATGGGTCGTGC GGGCACCGCGACGTGTGCTCCACATGCATCGTCCGCCTCCGTTTCGTGATGGGCGACAAC AAGTGTTGCATCTGCAAGACCGTCTGCCCCTTCGTCTTTGTCACTAAGGCCATGGGTAAA TACACTAGAGTGATCACTGATTTCTCTGTGTTACCCGCTGGGGTAAATGAGGGCAAAGCT GGGGATTTCTGGTACCATGAAGATACAAAGGCATACTTTGATGATGCGGACCACTACCGG ATGATACGGACCATGTGTCAACTTTCCTGTAATGTTTGTGACAACGCAGAAGATCAGGTT GCTCAAGCAAAGCGCAAAAGCAAGTTCAGGAGCATTGAACAACTGAAGGGACATTTATAC TGCGTGCATAGGTTGCACATGTGCAATCTTTGTTTGGAGGGGAGGAAGGTGTTCATTTGT GAACAAAAGCTTTATTTGAAGTCACAGTTAGCTCAGCATATGAAGACTGGCGACTCTGAA GTGGATGGCTCTGAGGTAGAGCGCAATGGTTTTGCTGGGCATCCAATGTGTGAGTTCTGC AGAAGTTCATTTTATGGAGATAGTGAGCTTTACATGCATATGTCTAGGGAACACTATTCT TGCCACATATGCAAGAGGCAGAACCCTGGTCGTGTTGAATATTTCGCGAACTATGAGGAC ATTGAGTTGCATTTTAGAGAAGATCATTTCCTATGTGAAGATGAAGCATGTTTGGAAAAG AAGTTTGTTGTCTTCCTGAGTAAAGCGCAGCTGAAGGCAAGTTGGAACAAGTTATTGAAG CATAATGCTATGGAGCACGGTGGGCGGATGTCTCGTTCTCAGAGGAATGCTGCACTTGAG ACACCTAGCAGCTTTATATATCGCAGAAATGAGCAAGAACAACGGCGTGGCAGGGGCCGT AATGCTTTCCATGATGGATCTGATTGTCATATCTCATCGTCTGCAAATGCTTTCCATGAT CGATCTGACTGTCATATCTCATCATCTGCAAATGCTTTCCATGATAAATCTGACTGCCAT ATCCCATCAACTGCACAAAAAGACCGGGCAGCTGCCGATGGCCATGCAGGGCGTCTTGAC AATGTTTCAGAGTCGTTTCAGTCATTAAGTATTGGATCCAGTTCTAGGGAAGCTGAAGTT GGCGAAGGCTCAAGGACTGGACGAGTGCTGGAACAGTTGTCCTTCCGACCTCTTTCTGAC CCGGATATTCCTGACAATAGTGTTGAAACCTCATTCCCTTCATTATCAGAGCAGCAATCC AGTCTCAATCAGAGTGCAAGGGACGCTCCGAGGCTTGGAGATGAGTCACTGTTCCCCCCT TTGACTGGGTCTAGTAACAAGATGAAGCAGCCTGTTTTTACGCCTAAGCGTCCTCGAACT TTTCCTGCTGCCGAGGATATCCATGCTGCAAAGATGCGCTATGCTCTGGGAATGAACGAG GACATGTACTCTGCGTTCAAAGAGATCGCTGGTGAATACCGTCGAGGTACCATAGATGCT TTTGAGTATCTTTCATATGTCGAGCAGTTCGGACTGTCGCACCTTGTTCCTGAGATGGTT AGGCTATTGCCTGATTCTCGAAAACAGAGGGAACTTGCTGATGCGCACTATACAAATACA CGGTTGAAAAACCTCCAAGAAAATGGAAATAATAGGAAGGGGGGATTCTTCTTATCAAAG AAGAAAAGCCTCCAAGAAAATGGAGGTGGAACTAGCGAATGGAGGTGGAACTAG

Peptide Sequence

PEP ID	Zm00001d048205_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:152408526:152412651:-1 gene:Zm00001d048205 transcript:Zm00001d048205_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	MEDFCAVCADTLEWVAYGSCGHRDVCSTCIVRLRFVMGDNKCCICKTVCPFVFVTKAMGK YTRVITDFSVLPAGVNEGKAGDFWYHEDTKAYFDDADHYRMIRTMCQLSCNVCDNAEDQV AQAKRKSKFRSIEQLKGHLYCVHRLHMCNLCLEGRKVFICEQKLYLKSQLAQHMKTGDSE VDGSEVERNGFAGHPMCEFCRSSFYGDSELYMHMSREHYSCHICKRQNPGRVEYFANYED IELHFREDHFLCEDEACLEKKFVVFLSKAQLKASWNKLLKHNAMEHGGRMSRSQRNAALE TPSSFIYRRNEQEQRRGRGRNAFHDGSDCHISSSANAFHDRSDCHISSSANAFHDKSDCH IPSTAQKDRAAADGHAGRLDNVSESFQSLSIGSSSREAEVGEGSRTGRVLEQLSFRPLSD PDIPDNSVETSFPSLSEQQSSLNQSARDAPRLGDESLFPPLTGSSNKMKQPVFTPKRPRT FPAAEDIHAAKMRYALGMNEDMYSAFKEIAGEYRRGTIDAFEYLSYVEQFGLSHLVPEMV RLLPDSRKQRELADAHYTNTRLKNLQENGNNRKGGFFLSKKKSLQENGGGTSEWRWN

Transcript Sequence

Transcript ID	Zm00001d048205_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:152408526:152412651:-1 gene:Zm00001d048205 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING/U-box superfamily protein
Sequence	GCGTCCTAACTCTTTCATCATCTTGCTTGCCGCCGCCGTGGCCGATCTTCGCTGCCTGCC AGCCATGGAAGACTTTTGTGCGGTGTGCGCAGATACGCTGGAGTGGGTGGCCTATGGGTC GTGCGGGCACCGCGACGTGTGCTCCACATGCATCGTCCGCCTCCGTTTCGTGATGGGCGA CAACAAGTGTTGCATCTGCAAGACCGTCTGCCCCTTCGTCTTTGTCACTAAGGCCATGGG TAAATACACTAGAGTGATCACTGATTTCTCTGTGTTACCCGCTGGGGTAAATGAGGGCAA AGCTGGGGATTTCTGGTACCATGAAGATACAAAGGCATACTTTGATGATGCGGACCACTA CCGGATGATACGGACCATGTGTCAACTTTCCTGTAATGTTTGTGACAACGCAGAAGATCA GGTTGCTCAAGCAAAGCGCAAAAGCAAGTTCAGGAGCATTGAACAACTGAAGGGACATTT ATACTGCGTGCATAGGTTGCACATGTGCAATCTTTGTTTGGAGGGGAGGAAGGTGTTCAT TTGTGAACAAAAGCTTTATTTGAAGTCACAGTTAGCTCAGCATATGAAGACTGGCGACTC TGAAGTGGATGGCTCTGAGGTAGAGCGCAATGGTTTTGCTGGGCATCCAATGTGTGAGTT CTGCAGAAGTTCATTTTATGGAGATAGTGAGCTTTACATGCATATGTCTAGGGAACACTA TTCTTGCCACATATGCAAGAGGCAGAACCCTGGTCGTGTTGAATATTTCGCGAACTATGA GGACATTGAGTTGCATTTTAGAGAAGATCATTTCCTATGTGAAGATGAAGCATGTTTGGA AAAGAAGTTTGTTGTCTTCCTGAGTAAAGCGCAGCTGAAGGCAAGTTGGAACAAGTTATT GAAGCATAATGCTATGGAGCACGGTGGGCGGATGTCTCGTTCTCAGAGGAATGCTGCACT TGAGACACCTAGCAGCTTTATATATCGCAGAAATGAGCAAGAACAACGGCGTGGCAGGGG CCGTAATGCTTTCCATGATGGATCTGATTGTCATATCTCATCGTCTGCAAATGCTTTCCA TGATCGATCTGACTGTCATATCTCATCATCTGCAAATGCTTTCCATGATAAATCTGACTG CCATATCCCATCAACTGCACAAAAAGACCGGGCAGCTGCCGATGGCCATGCAGGGCGTCT TGACAATGTTTCAGAGTCGTTTCAGTCATTAAGTATTGGATCCAGTTCTAGGGAAGCTGA AGTTGGCGAAGGCTCAAGGACTGGACGAGTGCTGGAACAGTTGTCCTTCCGACCTCTTTC TGACCCGGATATTCCTGACAATAGTGTTGAAACCTCATTCCCTTCATTATCAGAGCAGCA ATCCAGTCTCAATCAGAGTGCAAGGGACGCTCCGAGGCTTGGAGATGAGTCACTGTTCCC CCCTTTGACTGGGTCTAGTAACAAGATGAAGCAGCCTGTTTTTACGCCTAAGCGTCCTCG AACTTTTCCTGCTGCCGAGGATATCCATGCTGCAAAGATGCGCTATGCTCTGGGAATGAA CGAGGACATGTACTCTGCGTTCAAAGAGATCGCTGGTGAATACCGTCGAGGTACCATAGA TGCTTTTGAGTATCTTTCATATGTCGAGCAGTTCGGACTGTCGCACCTTGTTCCTGAGAT GGTTAGGCTATTGCCTGATTCTCGAAAACAGAGGGAACTTGCTGATGCGCACTATACAAA TACACGGTTGAAAAACCTCCAAGAAAATGGAAATAATAGGAAGGGGGGATTCTTCTTATC AAAGAAGAAAAGCCTCCAAGAAAATGGAGGTGGAACTAGCGAATGGAGGTGGAACTAGCA GAAAATTCATATTACAGAAAGCACTGCCGACGGATGATGTGAACAGGGCACAAGCAGATA ATATTTAGGACACTTTTAGAAGGCTTCAATCAAACCATCTTACTTAGAAAGGAGAAGCTG AGGTGTTGTCCAAGGATGGGTATCGATCTTTCATGGGGTTCAACCGGCCGCTGCTGGACC CTTCATCTAATATGGACAGTGAAAGTCATCTAGTGCAACGGAGGAGGCAATAAGGAACCG AAGAAGACATCAAGGTTTCTCAGAGCTCGTTCAAGTGACAACTCGTTAGCCATGCTTGAT TTAAGACAGCCAAGTGCAAGCCATGAATGTCCACAAAGGAAATTACAAGGCCTAGAGACG TGATTGGTGCTTGGAAGAAGAAGAATGGTGGGGGGCAGAAACTCTTTTTGATCAATTGAC GGAAGAGTTATTGCAACTGTATTTAGACGTAGTATTTTTTGAATTTTGAGATAGAGTCGT GGTATTGAAAAATATTACAGTATTTTTTTCCAAGAAGTGTTTGGCAACCTTGTAAAAACA CTCTCTTTTGAATACTATAATTTAGTAGTTACTATGGTTTAGTAGATATCATGGTATTTA TTTTTGGAGTATTTAAAACTCCACTCTAATCTAAAGTTTGTTTATGTATGACTGGCTTTT GGTACGTATACATGAAATATCATGGT