Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048171_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:9:151310549:151314863:-1 gene:Zm00001d048171 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast RNA splicing4 description:Protein CLT2 chloroplastic
Sequence	ATGCCCGTCCCGCCCCTCCTCTCGCCACTTCGCCTGCCCTCGCCAGCGCCGCCCCTCCAC CGCAATGGAGCGCCATGGCGGCGCCCGACGCAACTACGTGCCGCACTACGGGTCCCCCCT CCGCTTCACCTGGGGCTCGCCGCGGCCCGTGGCGATGGCGTGAGGCGGTTCGTCGGGACG CTGGGCTCGAAGAGAGCGCGAGCTGTTGGTGCAATTAGGGTTTCTGCGATCTCTGGAGAC GGCGGTGGCGGTGCTGGTGGTACGGGAATTGCGGCGGCAGCGGCCGCCACTGTGGTCTTT GCTGTGATGAACCGGGTGCTCTACAAGCTGGCGCTCGTGCCAATGAAGAATTACCCCTTC TTCCTCGCCCAGTTCGCCACATTTGGGTATGTCCTAGTGTATTTCTCAATTCTCTTCATA AGATTTCGCGCTGGGATTGTCACTAGAGAAATGTTAGCGCTTCCGAAGCCACAGTTCATG CTAATTGGTTTACTGGAAGCGCTAGGTGCTGCTTCAGGCATGGCTGCTGCTGCTATGTTG CCCGGGCCATCTATTCCAGTGTTGTCACAGTCCTTTCTGGTTTGGCAACTTATCTTATCT GCCCTCATCTTGGGAAGGAAATATAGAGCAAATCAGATCCTTGGCTGCTTGCTTGTTACA GCTGGAGTAATTCTAGCAGTGGCCGGTGGAGCCAGTAATGGTCCGATTCTCTTTGAAGTC AAATTCTTTTGGCCAGCAGTAATGATGATTTCAGCTGCATTTCAAGCTGCTGCTTCCATT ATCAAGGAGTTTGTTTTCATTGATGGTGCAAAACGCCTTGAGGGAAAGAAGCCTGATATA TTTGTAGTCAACTCTTTTGGTTCTGGTTTCCAGGTAAGACAATAG

Peptide Sequence

PEP ID	Zm00001d048171_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:9:151310549:151314863:-1 gene:Zm00001d048171 transcript:Zm00001d048171_T008 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast RNA splicing4 description:Protein CLT2 chloroplastic
Sequence	MPVPPLLSPLRLPSPAPPLHRNGAPWRRPTQLRAALRVPPPLHLGLAAARGDGVRRFVGT LGSKRARAVGAIRVSAISGDGGGGAGGTGIAAAAAATVVFAVMNRVLYKLALVPMKNYPF FLAQFATFGYVLVYFSILFIRFRAGIVTREMLALPKPQFMLIGLLEALGAASGMAAAAML PGPSIPVLSQSFLVWQLILSALILGRKYRANQILGCLLVTAGVILAVAGGASNGPILFEV KFFWPAVMMISAAFQAAASIIKEFVFIDGAKRLEGKKPDIFVVNSFGSGFQVRQ

Transcript Sequence

Transcript ID	Zm00001d048171_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:151310549:151314863:-1 gene:Zm00001d048171 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:chloroplast RNA splicing4 description:Protein CLT2 chloroplastic
Sequence	GAGGCGGTAGACACCGGTGGCCTCAAACGACCGCAGCTCGTCGCTGACTTCCATCTGCGG TGGCAGCGGCAAGGGTTTGGCAGAATCTGAACTTGGAACTACTGGGTCTCCTTCCTTCGA GCCGGTGCAGAGGGCCGAGCGTCGCCGTCACCGCCGACGCCCGAGTTTGCGGGCCGCCTC CAGTCCTCCCTCCATCTCAGGTAAGCGGCCGCCGAGCAGCCCCGGGCCAGGAGGCGGGAG CGAGCACGCGGGCGTGGGGAGGTCAGTCAGGGAGGCACGCGCCGTCAGTCGGGTTCAAGT ATCATTGGCCCCCTACCAGTCAGATACTCTGCGAGCGAAACGTGAGTTGGCACAGCAGAC AACACCCGCGTGCAGCGCTGCAATCCAAAGAAGCGAAGCAACCAACCCCCGAAATCTTCA ACGGCGCCATCGCCACTGCGTCATGCCCGTCCCGCCCCTCCTCTCGCCACTTCGCCTGCC CTCGCCAGCGCCGCCCCTCCACCGCAATGGAGCGCCATGGCGGCGCCCGACGCAACTACG TGCCGCACTACGGGTCCCCCCTCCGCTTCACCTGGGGCTCGCCGCGGCCCGTGGCGATGG CGTGAGGCGGTTCGTCGGGACGCTGGGCTCGAAGAGAGCGCGAGCTGTTGGTGCAATTAG GGTTTCTGCGATCTCTGGAGACGGCGGTGGCGGTGCTGGTGGTACGGGAATTGCGGCGGC AGCGGCCGCCACTGTGGTCTTTGCTGTGATGAACCGGGTGCTCTACAAGCTGGCGCTCGT GCCAATGAAGAATTACCCCTTCTTCCTCGCCCAGTTCGCCACATTTGGGTATGTCCTAGT GTATTTCTCAATTCTCTTCATAAGATTTCGCGCTGGGATTGTCACTAGAGAAATGTTAGC GCTTCCGAAGCCACAGTTCATGCTAATTGGTTTACTGGAAGCGCTAGGTGCTGCTTCAGG CATGGCTGCTGCTGCTATGTTGCCCGGGCCATCTATTCCAGTGTTGTCACAGTCCTTTCT GGTTTGGCAACTTATCTTATCTGCCCTCATCTTGGGAAGGAAATATAGAGCAAATCAGAT CCTTGGCTGCTTGCTTGTTACAGCTGGAGTAATTCTAGCAGTGGCCGGTGGAGCCAGTAA TGGTCCGATTCTCTTTGAAGTCAAATTCTTTTGGCCAGCAGTAATGATGATTTCAGCTGC ATTTCAAGCTGCTGCTTCCATTATCAAGGAGTTTGTTTTCATTGATGGTGCAAAACGCCT TGAGGGAAAGAAGCCTGATATATTTGTAGTCAACTCTTTTGGTTCTGGTTTCCAGGTAAG ACAATAGAGATTCACTTCTTTCAATAATTGTTCCTTTTGCTCACTGAAAATCTTTGTTGT TGCACCATACAGGCACTTTTTATTTTCCTACTCCTTCCATTTCTCTCTAACTTGAAAGGG ATTCCTTTTGCTGAACTCCCTGCATACCTAACCCGTGGTGCTGCATGCTTTCTGAATGTG GGAGGGAATCTGAAGGGTGAGTATTGTTTCTCATATCACATTCATGTGGTAAATAAGTGG AGCTTCTCATATTATATAATTTCAAATCTATGGTTAATTAGAGAAAAAGTGATGTTCTCA TATTATATGATTTCAAATATATGGTTGATTGGAGAAAAGGGATCTTCATGAAATCTTTCA CAAGTGAATATTATCCATCTCAACCTTTTTGTTTTGGTATTATCTATATTATTGAGGTAT GCATGGCATAAATGTTTAACACTTTGCTAGCTATGCCAAACTCAAAACGCTTGTGGCCAG CAGTCTTGAACATGATTATCTATGATCTATGATGCAAGATCATTTGCTAACGGTTTAGAT TTTTCAGATTGCCATGGAGCTCCTTTGCTACCACTTCTCTACATAACTCTGAACATGGCC TTCAACATTTCTGTCCTTAATCTTGTGAAGATGTCTACAGCAGTGGTTGCTTCGCTGACA TCAACTTTAGCAGGTTATGCATTTTGTTTCCCCACTTCATATTTTAATGTTTAAGCAGAG TACTTGTGCAAGGCAATATGGCAACTTGGCAAGGGCATATGGTGCTTTATGTTTTATAAA AACTGAGGTGCCATGCAAATCTTTTTGTGCAGTTGTGCTAGAACAGATTTCCTGATAAGT AGTCGACGTACTCTATAACTCGATGCACTCATGGCTCACCACCAAAACTTTAAGGAAACA AGCCCTTTTTAAGCTGACTTCTGTTTGGTTTGTTGTATGTTTGTTTTAACACTATATGCT TCTCTGCAGTACCTCTTTCCATCTATATACTGTCACTGCCTCTACCATATCTACCCGAAG GAACAAATTTGAGCGCATCTTTTTTGATTGGTGTTGCTACCTTAGTGCTCGGATTGCTTC TATACAATCTTCCTCAAGAATCAACCAATCAAGTAAAGGAAGATTAATCTAAACCCATAT CAGATATAAGGTTAACAGGAAGCTATTGGTGCTCCACTAAGAAAATAGCCGCATTTTGTT GACAGTGGCTTCACAGTTTGGTACATAACTCATGAAGAGCAGTGTTCTTCTGCCACAAAC ATTTGCGGTGCAAACATTTGAGGCACCAGCTGACTTCAAAGTTTAGAAACAGCAAGTTCT TGTTTCATCTGTTAACAAAATCCTAATGGATTATGCAGCTATATATAAGCTCTACCTGAG CGGATGTAACTACTAACTACTTTCAGATGAGTAAGGGCTTTACAAATTCATTGGTTG