Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048143_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:150812433:150814543:1 gene:Zm00001d048143 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-D5-1
Sequence

ATGGGGGACGCCGCCGCCGCCGCAGCCTCCACGTCCGCTCCCACCACGCCCACCTCCATT
CTCATCTGCCTGGAAGACGGCAGCGACCTTCTCGCCGATGCCGACGATGGCGCCGGCACT
GACCTAGTTGTCGCCCGCGACGAGCGTCTGCTTGTCGTGGACCAGGACGAGGAGTATGTA
GCGCTGCTCCTGTCCAAGGAGAGCGCGTCAGGCGGCGGCGGCGGCCCGGTGGAGGAAATG
GAGGACTGGATGAAGGCCGCGCGCTCCGGATGCGTCCGCTGGATCATCAAGACCACGGCG
ATGTTCCGGTTCGGCGGGAAGACCGCTTACGTCGCGGTGAATTACCTCGATCGCTTCCTG
GCGCAACGGCGAGTCAATAGGGAGCATGCGTGGGGTCTGCAGCTGCTCATGGTGGCGTGC
ATGTCGCTGGCGACCAAGCTGGAGGAGCAGCACGCTCCGCGGCTGTCGGAGTTGCCGCTG
GACGCGTGCGAGTTCGCGTTCGACCGCGCGTCCGTGCTGCGGATGGAGCTCCTCGTCCTG
GGCACCCTCGAGTGGCGGATGGTCGCCGTCACCCCCTTCCCCTACATCAGCTGCTTCGCG
GCGCGGTTCGGGCAGGACGAGCGCCGGGCGGTCCTCGTGCGCGCCGTGGAGTGCGTCTTC
GCGGCGATCAGAGCGATGAGCTCGGTGGAGTACCAGCCGTCGACCATCGCCGTAGCATCC
ATCCTCGTCGCTCGCGGCAGGGAGACGCCCGCCGACAATCTGGACGCGCTCAAGGCGATC
CTGGGCTCATCATTTCCACAGCTAGACACCGGGCATGTGTACTCCTGCTACAGCGCAATG
ATTCGGGAGGACGACAAGTCGCCGACGCAGTCGACGTCGACGTCGACGGGGGTGGCGTCC
TCGGGCGTCTCTGTCGCCGCGCACGCCGGGGGGAGCGGGAGTCCCAGCCCCCCGGGCGCT
TCCGTGTCCGTGGGCGCCAATAATGCCGCTGGCACCGCCCCGCCGGCAACCACGGACAAC
CGCAACAAGAGGAGACGGTTGCGCTCACCTCAGCGACAGTAG

Peptide Sequence

PEP ID

Zm00001d048143_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:150812433:150814543:1 gene:Zm00001d048143 transcript:Zm00001d048143_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-D5-1
Sequence

MGDAAAAAASTSAPTTPTSILICLEDGSDLLADADDGAGTDLVVARDERLLVVDQDEEYV
ALLLSKESASGGGGGPVEEMEDWMKAARSGCVRWIIKTTAMFRFGGKTAYVAVNYLDRFL
AQRRVNREHAWGLQLLMVACMSLATKLEEQHAPRLSELPLDACEFAFDRASVLRMELLVL
GTLEWRMVAVTPFPYISCFAARFGQDERRAVLVRAVECVFAAIRAMSSVEYQPSTIAVAS
ILVARGRETPADNLDALKAILGSSFPQLDTGHVYSCYSAMIREDDKSPTQSTSTSTGVAS
SGVSVAAHAGGSGSPSPPGASVSVGANNAAGTAPPATTDNRNKRRRLRSPQRQ

Transcript Sequence

Transcript ID

Zm00001d048143_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:150812433:150814543:1 gene:Zm00001d048143 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cyclin-D5-1
Sequence

GGGCGCGCGCGAGTGTGGAGAGAAGGGAGGGAATTCCCCCCTTTCTGTTCGGCGCCGTGC
TCGCGCACACACCCGCACGCCCCACGCTGCACGCCGCCTTTTCCTCCGTCTTGCTGCTGC
AAGTCCGCAACCACTGGAGGAAAAATCTTTTCCTTCACTTTTCTTCCCTTTCCCCCCGCG
CATGCACGGGCTCTGATTGACGCCATGGGGGACGCCGCCGCCGCCGCAGCCTCCACGTCC
GCTCCCACCACGCCCACCTCCATTCTCATCTGCCTGGAAGACGGCAGCGACCTTCTCGCC
GATGCCGACGATGGCGCCGGCACTGACCTAGTTGTCGCCCGCGACGAGCGTCTGCTTGTC
GTGGACCAGGACGAGGAGTATGTAGCGCTGCTCCTGTCCAAGGAGAGCGCGTCAGGCGGC
GGCGGCGGCCCGGTGGAGGAAATGGAGGACTGGATGAAGGCCGCGCGCTCCGGATGCGTC
CGCTGGATCATCAAGACCACGGCGATGTTCCGGTTCGGCGGGAAGACCGCTTACGTCGCG
GTGAATTACCTCGATCGCTTCCTGGCGCAACGGCGAGTCAATAGGGAGCATGCGTGGGGT
CTGCAGCTGCTCATGGTGGCGTGCATGTCGCTGGCGACCAAGCTGGAGGAGCAGCACGCT
CCGCGGCTGTCGGAGTTGCCGCTGGACGCGTGCGAGTTCGCGTTCGACCGCGCGTCCGTG
CTGCGGATGGAGCTCCTCGTCCTGGGCACCCTCGAGTGGCGGATGGTCGCCGTCACCCCC
TTCCCCTACATCAGCTGCTTCGCGGCGCGGTTCGGGCAGGACGAGCGCCGGGCGGTCCTC
GTGCGCGCCGTGGAGTGCGTCTTCGCGGCGATCAGAGCGATGAGCTCGGTGGAGTACCAG
CCGTCGACCATCGCCGTAGCATCCATCCTCGTCGCTCGCGGCAGGGAGACGCCCGCCGAC
AATCTGGACGCGCTCAAGGCGATCCTGGGCTCATCATTTCCACAGCTAGACACCGGGCAT
GTGTACTCCTGCTACAGCGCAATGATTCGGGAGGACGACAAGTCGCCGACGCAGTCGACG
TCGACGTCGACGGGGGTGGCGTCCTCGGGCGTCTCTGTCGCCGCGCACGCCGGGGGGAGC
GGGAGTCCCAGCCCCCCGGGCGCTTCCGTGTCCGTGGGCGCCAATAATGCCGCTGGCACC
GCCCCGCCGGCAACCACGGACAACCGCAACAAGAGGAGACGGTTGCGCTCACCTCAGCGA
CAGTAGGAGCAGCTCAGCTGCTGGCAGTGCATTGCAGTGCAGTGCAGTCCAGCTGCGTTT
TCTTTTTTCAGCTCACCATTTCCTTTTGCTGCCGATTGTTTCTTCAGGGGTGGCCGTAGA
GTGATTTGGTAATTTAGTGCCGGAAAGATTAGTGCGGTGTCGCAGAGTGATTTGGTAATT
TAGTGCCGGAAAGATTTCTTTGTTTTGAGGAGATCTTTCGCGGGACCAAAGGGAGGGGGG
CAGTGTAAAGACGACAGAACAAGCGTGAAGGCCTCGAGAGTCGAGACCTCACAGGGTACC
GCCTAGCGCCTACTGGGGTGAAAGTGAAGTCAAGGAGTCGGGAGGGTGTGTGTGAATACC
GTTTGTAGCAGCTAGTGCGTCCGTCTGTCTTTTTTTTTCTTTCTGTTTATTAATTATTAA
TAGCCTGCTAGATT