Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048131_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:150564485:150566603:-1 gene:Zm00001d048131 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 63
Sequence	ATGAGAGGTTTAAGTCGGTATCTGCCGTTCTGCGGCGGCGGGTGCTGCTGCGGTGACGGC GCCGGTAGGGCAGGGGGCGTGGCGGATGGGCTGGTGTGGGACGTGGCCCTCAAGGCGCAC GCGTCCGGTGACTACTCCATCGCCGTGGCGCAGGCGAACGAGGCGCTCGAGGACCAGGCG CAGGTGGTCGCGGCTCCGGCCGCCACGCTCGTCGGCGTCTTCGACGGGCACGGCGGGCCC GAGGCCGCGCGCTTCGTCAACAGGCGCCTCTTCTCGCATATCCAAGCCTTTGCGGCTGAG AACGGTGGCCTGTCAGCGGAGGTGTTCCAGAAGGCCTTCGGCGCGACGGAGGAGGAGTTC ATAGGCCTGGTGCAGAAATCATGGCCGTCGCAGCCGAGGATCGTGTCCGTGGGCTCCTGC TGCCTGGTGGGCGCCGTCGACATCGAGAACGGGACGCTGTACGTGGCCAACCTGGGCGAC TCGCGCGCCGTGCTGGGCCGCCGCCGGGGCAAGGGGAGGCGCGTGGTGGCCGAGCGGCTG TCTCAGGACCACAACGTGGCCGACGAGGGCGTGCGGCGGGAGGTGGCCGAGATGCACCCG GACGACTCGCACATCGTGCTCAACAGCCACGGCGTGTGGCGGATCAAGGGGATCATCCAG GTGTCCAGGTCCATCGGCGATGTGTACCTCAAGAAGCCTGACATCTGCAGGGGCAACCCG GTGCTGCAGCAGTCCATCTGCCCGTTCCCGCTGCGCCGCCCCGTCATGACCGCCGTGCCG TCCATCACCACGCGGGAGCTGCGCCCCGGCGACCGCTTCATCATCTTCGCGTCGGACGGG CTGTGGGAGCAGCTCAGCGACGACGCCGCGGTGGACGTCGTGGCGAGCAGCCCGAGGAAG GGCGTGGCCATGCGCCTGGTGCGGGCCGCCCAGCTGGAGGCGGCGCGCAAGAAGGAGGTC AAGTACGACAAGATCCGGACCATCGAGAAGGGCCAGCGCCGGCACTTCCACGACGACATC ACCGTCGTCGTGCTCTTCCTCGACAAGTGCAGGGGAGCTGCCAGGTCCGGCCCCGAGGAC ATCGACGGCACCTACGCGCCGGTGGACGTGTTCTCCTGCAGCCCCGCCGCCGGCGGCGAT CACGAGGACCCGACGAAGCCCGTCCTGCGTCGTTAA

Peptide Sequence

PEP ID	Zm00001d048131_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:150564485:150566603:-1 gene:Zm00001d048131 transcript:Zm00001d048131_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 63
Sequence	MRGLSRYLPFCGGGCCCGDGAGRAGGVADGLVWDVALKAHASGDYSIAVAQANEALEDQA QVVAAPAATLVGVFDGHGGPEAARFVNRRLFSHIQAFAAENGGLSAEVFQKAFGATEEEF IGLVQKSWPSQPRIVSVGSCCLVGAVDIENGTLYVANLGDSRAVLGRRRGKGRRVVAERL SQDHNVADEGVRREVAEMHPDDSHIVLNSHGVWRIKGIIQVSRSIGDVYLKKPDICRGNP VLQQSICPFPLRRPVMTAVPSITTRELRPGDRFIIFASDGLWEQLSDDAAVDVVASSPRK GVAMRLVRAAQLEAARKKEVKYDKIRTIEKGQRRHFHDDITVVVLFLDKCRGAARSGPED IDGTYAPVDVFSCSPAAGGDHEDPTKPVLRR

Transcript Sequence

Transcript ID	Zm00001d048131_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:150564485:150566603:-1 gene:Zm00001d048131 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 63
Sequence	CACGCCCCGACAAAGCGAGCGAGAGCAGCCACGGCAAAACCCTCGCGGGCGTCTCTCTCT CGATCGGCGGGCAGCAGCGACGCGCGCGCACAACACAGCAGGTGAATTCAAGGCAAGTGA GTCAGTGGTTGGGGTCCTCGTCCTGGCTATGAGAGGTTTAAGTCGGTATCTGCCGTTCTG CGGCGGCGGGTGCTGCTGCGGTGACGGCGCCGGTAGGGCAGGGGGCGTGGCGGATGGGCT GGTGTGGGACGTGGCCCTCAAGGCGCACGCGTCCGGTGACTACTCCATCGCCGTGGCGCA GGCGAACGAGGCGCTCGAGGACCAGGCGCAGGTGGTCGCGGCTCCGGCCGCCACGCTCGT CGGCGTCTTCGACGGGCACGGCGGGCCCGAGGCCGCGCGCTTCGTCAACAGGCGCCTCTT CTCGCATATCCAAGCCTTTGCGGCTGAGAACGGTGGCCTGTCAGCGGAGGTGTTCCAGAA GGCCTTCGGCGCGACGGAGGAGGAGTTCATAGGCCTGGTGCAGAAATCATGGCCGTCGCA GCCGAGGATCGTGTCCGTGGGCTCCTGCTGCCTGGTGGGCGCCGTCGACATCGAGAACGG GACGCTGTACGTGGCCAACCTGGGCGACTCGCGCGCCGTGCTGGGCCGCCGCCGGGGCAA GGGGAGGCGCGTGGTGGCCGAGCGGCTGTCTCAGGACCACAACGTGGCCGACGAGGGCGT GCGGCGGGAGGTGGCCGAGATGCACCCGGACGACTCGCACATCGTGCTCAACAGCCACGG CGTGTGGCGGATCAAGGGGATCATCCAGGTGTCCAGGTCCATCGGCGATGTGTACCTCAA GAAGCCTGACATCTGCAGGGGCAACCCGGTGCTGCAGCAGTCCATCTGCCCGTTCCCGCT GCGCCGCCCCGTCATGACCGCCGTGCCGTCCATCACCACGCGGGAGCTGCGCCCCGGCGA CCGCTTCATCATCTTCGCGTCGGACGGGCTGTGGGAGCAGCTCAGCGACGACGCCGCGGT GGACGTCGTGGCGAGCAGCCCGAGGAAGGGCGTGGCCATGCGCCTGGTGCGGGCCGCCCA GCTGGAGGCGGCGCGCAAGAAGGAGGTCAAGTACGACAAGATCCGGACCATCGAGAAGGG CCAGCGCCGGCACTTCCACGACGACATCACCGTCGTCGTGCTCTTCCTCGACAAGTGCAG GGGAGCTGCCAGGTCCGGCCCCGAGGACATCGACGGCACCTACGCGCCGGTGGACGTGTT CTCCTGCAGCCCCGCCGCCGGCGGCGATCACGAGGACCCGACGAAGCCCGTCCTGCGTCG TTAATACGGATCGCTTGGTGTTCCGCGTGCTGTCAGATACTGAACAAACATATACTCTTC TCTTTCAGTCTTCTTTCAGTGCTCTGCTTCGCTCTCTAAACAAGAGAAGGTACATACTTG AGCTGCTTCGTTTGGAACGCAGGAATATTTGCCGGTTCTTGCGTGAATTGAGTTGTTTAT CGTCCAAGACAATTCGCTTGTAAAGAAATGATAGTTTCAGGTCATGTGTCATAGATTGTA AATCTTCATCCATCTCTTCTCACTTCTATCCTATCTACTACTATCTGTCCTTCCGATGTT CTTCATCGTCGTCTATTTCGATGTTCTTCATAGCTGTCAACCGAAAGCTAAGATGAATAT ACTCAGCATCTGCTGGTTAGCAGCCGGCCCCCGGCCGCCGGCGACCTCCTATCAGCGAGG CAGCAAGTGAACTGCATGCGAAGCAGGCAAGCCGGTCGTCCCTCGTCAGCGGTCATGATC TCGGAGACGGTCTGCTCTGGAATATGGCTATGTGGAAAGACGGCCACGATCGTGGATCGG TTCAACAGGCACTATAATTCTTGACCTCTGAGTCAACAGAGTGATGGCATCGATGCCCGG ATGGCCAGGATCGCGAGAAATGGTGGACGAACTATCATGACAGAAAAAAGAACTGCCGGC AAAATTCTGTCCAACTTGAGCTTGTTCGGTTACTTTTATTATATATGGATGGGATGAAAT TG