Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048109_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:150356876:150359747:1 gene:Zm00001d048109 gene_biotype:protein_coding transcript_biotype:protein_coding description:Remorin family protein
Sequence

ATGCAAGCAAGCCGCCTTTTAAATACGAGGCTCTCGCTTGTTACTGAAGCTGCGCGGCGT
CTTGTGCCTCGGAACCTGCCAACTGCCATTGGAAGTGTTTCTCTACAGTCTACAAATACG
TCGCGCGCCATGGACGGCGACTCGAAGAAGCTGAGGGTGTGGTTTTCTGGAGTAGGAAAG
GGAGGTGGAGGTGGACGCCAGTCTTCAGCGGCACCACCGCAAGAAAGCGCGCCTATTGGA
AGAGCGGAAATGAACAGCAGCGGGGAATTTGATGCTGCATTCGCAGCCACAATTGCAGCA
GCAGCATTTGCAATTGCTGCCCGTGAAGAGAAGCTTGCAGCTCAGAAGAAGTCTGTCCCC
ATCGAGGAGGTGCCACGAGCCCTGTCGCTAGTCAAGAGAGCTGGAAGCACCAAAAAACCT
GCGGGAGGCAACAAAATCTCAAGATGGTTTAGCGGCAAGGAGCCTCTAGAACACGACGAC
GACGGTCCAGTGAGCAGGCCACTGAAACCAGCACCTGGAAAGCCCGAGGGTATGCCTGCA
GATCACAAGGTGGCACCCAAGATTCTTGAGACTTCTCTGAGTGTGAGGAAGGGTTCAGGG
TCCTCCGGCAAGACAACAGACAGGAAAGGGAGCAAGAAGTTTGAGCAAGAACATGTTCAG
AAAGCGCCATCGATCATCAGGCCATCTACATCATACCATTCTAGACGGAATGGAGAAGAC
GCAGCAGGAGTAGCTGCTATTGGCGGCACGAGATCTAAGGCTGATGAGTGGGAGAAGGCA
AAGCTTGCAAAAGTTAGAGAGGAGTACGAAAAGATGATGGAGACCATAGCTGAATGGGAA
ACTGAGAAGAAGGTGAAGGCGAGACGCCATAAAGAACAGAGAGAGACTGTGCTGGACAGA
AAGAGAGCAAAAGCACTAGAAGAATACAACCAGGAGATGACAAGGATCAGCAAGATTGCT
GGAGGAGCAAGGTCGATGGCAGAGGAACGAAAATACAACGACGAGAATAAGATCAAAGAG
AAGGCGCACAAGATACGATCCACAAGAAAGCCTCCCCGCACATGTGCTTGCTTTTGA

Peptide Sequence

PEP ID

Zm00001d048109_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:150356876:150359747:1 gene:Zm00001d048109 transcript:Zm00001d048109_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Remorin family protein
Sequence

MQASRLLNTRLSLVTEAARRLVPRNLPTAIGSVSLQSTNTSRAMDGDSKKLRVWFSGVGK
GGGGGRQSSAAPPQESAPIGRAEMNSSGEFDAAFAATIAAAAFAIAAREEKLAAQKKSVP
IEEVPRALSLVKRAGSTKKPAGGNKISRWFSGKEPLEHDDDGPVSRPLKPAPGKPEGMPA
DHKVAPKILETSLSVRKGSGSSGKTTDRKGSKKFEQEHVQKAPSIIRPSTSYHSRRNGED
AAGVAAIGGTRSKADEWEKAKLAKVREEYEKMMETIAEWETEKKVKARRHKEQRETVLDR
KRAKALEEYNQEMTRISKIAGGARSMAEERKYNDENKIKEKAHKIRSTRKPPRTCACF

Transcript Sequence

Transcript ID

Zm00001d048109_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:150356876:150359747:1 gene:Zm00001d048109 gene_biotype:protein_coding transcript_biotype:protein_coding description:Remorin family protein
Sequence

AACGGAGGCTGGACTGGATTCTTGAAGAGGCTTCCATTCCATGGGGGTAAAGCGATCCCA
TTTCCACTCCTGCCTGTTGTCTGCCTCCAAGGCAACAGTTTTTTAGTTTGCTTGCGCTCT
CCTGCCTTCGGTTCACCGCCTCTCCATGAATGCAAGCAAGCCGCCTTTTAAATACGAGGC
TCTCGCTTGTTACTGAAGCTGCGCGGCGTCTTGTGCCTCGGAACCTGCCAACTGCCATTG
GAAGTGTTTCTCTACAGTCTACAAATACGTCGCGCGCCATGGACGGCGACTCGAAGAAGC
TGAGGGTGTGGTTTTCTGGAGTAGGAAAGGGAGGTGGAGGTGGACGCCAGTCTTCAGCGG
CACCACCGCAAGAAAGCGCGCCTATTGGAAGAGCGGAAATGAACAGCAGCGGGGAATTTG
ATGCTGCATTCGCAGCCACAATTGCAGCAGCAGCATTTGCAATTGCTGCCCGTGAAGAGA
AGCTTGCAGCTCAGAAGAAGTCTGTCCCCATCGAGGAGGTGCCACGAGCCCTGTCGCTAG
TCAAGAGAGCTGGAAGCACCAAAAAACCTGCGGGAGGCAACAAAATCTCAAGATGGTTTA
GCGGCAAGGAGCCTCTAGAACACGACGACGACGGTCCAGTGAGCAGGCCACTGAAACCAG
CACCTGGAAAGCCCGAGGGTATGCCTGCAGATCACAAGGTGGCACCCAAGATTCTTGAGA
CTTCTCTGAGTGTGAGGAAGGGTTCAGGGTCCTCCGGCAAGACAACAGACAGGAAAGGGA
GCAAGAAGTTTGAGCAAGAACATGTTCAGAAAGCGCCATCGATCATCAGGCCATCTACAT
CATACCATTCTAGACGGAATGGAGAAGACGCAGCAGGAGTAGCTGCTATTGGCGGCACGA
GATCTAAGGCTGATGAGTGGGAGAAGGCAAAGCTTGCAAAAGTTAGAGAGGAGTACGAAA
AGATGATGGAGACCATAGCTGAATGGGAAACTGAGAAGAAGGTGAAGGCGAGACGCCATA
AAGAACAGAGAGAGACTGTGCTGGACAGAAAGAGAGCAAAAGCACTAGAAGAATACAACC
AGGAGATGACAAGGATCAGCAAGATTGCTGGAGGAGCAAGGTCGATGGCAGAGGAACGAA
AATACAACGACGAGAATAAGATCAAAGAGAAGGCGCACAAGATACGATCCACAAGAAAGC
CTCCCCGCACATGTGCTTGCTTTTGAGAATAGTTCTATACACTGAAATTTGGAACCGTAT
GAAAGAAGTGTGATTTGAAGTCACTATTGTAAAAGTCACACAATAGTGACGTACTGTATT
GTAATATGTATTTGGCTTTGACAAGATATTAGTGTAGAGTTGTATCCCCCTTCAAAAAGA
GAGTTGTATCCAACACGCAACATATTGACGCTTTCCACTGAAAGCAACATCAGCATGTTT
GAAGGACGTGGAATTCAGATAGAGAGAGAGGAAGATACATGCATCAATATTCAAGATGAA
GCCTGGAGTAGGAACTGCCCCCAACAACTATGAGAAAGGAGTACATATATTCTT