Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048092_T010
CDS Infomation	cds chromosome:B73_RefGen_v4:9:149963016:149969013:1 gene:Zm00001d048092 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	ATGTTGATGGATCTTTTGAGCCCTCTGTTTCCTTCATCGTTGATAGTTATAATGTGCTTA GGCAGCCTGTCTAGGTCATTCACTGGTGTTGCTAGTGGAGCAACTAGAGCAGCACTAACG CAGCATTTTGCACTTGCAAATAATGCAGCTGATATTTCTGCAAAGGAGGGCAGTCAGGAA ACACTTGCTACAATGTTAGGGATGGGGTTGGGGATGCTGTTAGCTCAAATTACCAGAGGG CATGCTTTGAGTGTATGGGCATCTTTTCTTTCTCTTACGATGTTCCATATGTATGCAAAT TACAAGGCAGTGCAGTCACTTTCACTCACTACGCTAAACTATGAGAGAGCTTCCATCTTG CTACAATACTTCAAGGAATGTGGTGAAGTTCTTGTGCCACGGAAGGTTTCCCAGCAGGAA CATATTCTTCCTTCTTGGTCAAACTGGAGGAAACTGAACAGAATTAAACTGCCACATGAG CGTGTGCACTTGGGTGCTAAAGCCTCGATGCTTACACACAGTGACATGTTGGTGATTGCA AAAACAAGATACCACTATGAAAACGCGAACTACTTTTTGCTGGATAAACAAGGCATCGTT TACGTTTTCATCCACAAGGAGGCAACACCAGCCGATGTTTTAAGGTCCTTCGTACACGGG CTCGTGCTAGCTAGCTCGACACAGAACAGCAAACCTCAGCACTTAGAGGCCCGTCGATGG ATGGACGAGATGTATACCAGTTTTATCTCGAAGCTGCAGACTGAAGGTTACTCGACGGAA CGCCTTCTGTCGCATTCGATTCTTTGGAGGGCACACTGGCTTCACGGCCAGCTGGATGAG AAGCTCAAGTAG

Peptide Sequence

PEP ID	Zm00001d048092_P010
PEP Infomation	pep chromosome:B73_RefGen_v4:9:149963016:149969013:1 gene:Zm00001d048092 transcript:Zm00001d048092_T010 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	MLMDLLSPLFPSSLIVIMCLGSLSRSFTGVASGATRAALTQHFALANNAADISAKEGSQE TLATMLGMGLGMLLAQITRGHALSVWASFLSLTMFHMYANYKAVQSLSLTTLNYERASIL LQYFKECGEVLVPRKVSQQEHILPSWSNWRKLNRIKLPHERVHLGAKASMLTHSDMLVIA KTRYHYENANYFLLDKQGIVYVFIHKEATPADVLRSFVHGLVLASSTQNSKPQHLEARRW MDEMYTSFISKLQTEGYSTERLLSHSILWRAHWLHGQLDEKLK

Transcript Sequence

Transcript ID	Zm00001d048092_T010
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:149963016:149969013:1 gene:Zm00001d048092 gene_biotype:protein_coding transcript_biotype:protein_coding description:Retrovirus-related Pol polyprotein LINE-1
Sequence	GATTGGGCCTTTGTATTGCCTTGCCAGGGCTTTCCTGGGAGCGTGACTCCGGATTATGTC CCGTTCCAGATGTGGGATACGTTGCAGGGTCTCTCCACATACATCCGTGCAATGTTGTCT ACACAAGCTCTTCTAGGGGCAATCGGAGTGGGGGAACAGTCCGCAACTGTCATAGGTGCT ACTTTTCAGTGGTTTCTGAGGGACTTGACAGGAATGCTTGGAGGGATATTGTTCACCTTT TACCAGGAATGTTGATGGATCTTTTGAGCCCTCTGTTTCCTTCATCGTTGATAGTTATAA TGTGCTTAGGCAGCCTGTCTAGGTCATTCACTGGTGTTGCTAGTGGAGCAACTAGAGCAG CACTAACGCAGCATTTTGCACTTGCAAATAATGCAGCTGATATTTCTGCAAAGGAGGGCA GTCAGGAAACACTTGCTACAATGTTAGGGATGGGGTTGGGGATGCTGTTAGCTCAAATTA CCAGAGGGCATGCTTTGAGTGTATGGGCATCTTTTCTTTCTCTTACGATGTTCCATATGT ATGCAAATTACAAGGCAGTGCAGTCACTTTCACTCACTACGCTAAACTATGAGAGAGCTT CCATCTTGCTACAATACTTCAAGGAATGTGGTGAAGTTCTTGTGCCACGGAAGGTTTCCC AGCAGGAACATATTCTTCCTTCTTGGTCAAACTGGAGGAAACTGAACAGAATTAAACTGC CACATGAGCGTGTGCACTTGGGTGCTAAAGCCTCGATGCTTACACACAGTGACATGTTGG TGATTGCAAAAACAAGATACCACTATGAAAACGCGAACTACTTTTTGCTGGATAAACAAG GCATCGTTTACGTTTTCATCCACAAGGAGGCAACACCAGCCGATGTTTTAAGGTCCTTCG TACACGGGCTCGTGCTAGCTAGCTCGACACAGAACAGCAAACCTCAGCACTTAGAGGCCC GTCGATGGATGGACGAGATGTATACCAGTTTTATCTCGAAGCTGCAGACTGAAGGTTACT CGACGGAACGCCTTCTGTCGCATTCGATTCTTTGGAGGGCACACTGGCTTCACGGCCAGC TGGATGAGAAGCTCAAGTAGGAGGAACACTGCAAGACCGCGTCTGCTTATCCAAGGACAG GTCACAGGTATATCGCCCAGGACGCGATTATTAGCTAGGGTGAGAACGTGTTAATTGTTC GCTTGTGCATGGCATGACTGCATGATGAAAGATAGATGCATGAGCTGCACCGAGCACCAC CAAATATAGTTAACCGCTTCGAGGTTCTAGCATATGGACGGACTTCACGATAAAAGTGCT GGCCTGTACGCTCGAGTTCAGCATGTTAATGGTTCACACTACGTCCATCCGCGCCGCTTT AGGGCATGTACAGTGGTGTTTAATGTGGAGTCTCTTAAGGTGTTTAAGGGGGTTATTTGT AAAAAAATCTTAGAGCCGTCTCTCCGTGAAGAGACGTCTCTGGCTCGTAAACCAAGTAGC AACAGACGCCTTACTTCCCAC