Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048079_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:149449795:149452163:-1 gene:Zm00001d048079 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	ATGCTCGTCCCTTCCTCTCCTCTCCTCTCCTCGTCTCCTCCCCTCCATTCGCCTGAGCCT CCTCCCCATCTCCGGATGGGTGGCTCCACCACCACCGTCGTCGTCATGCTGATCGTCGTT CTTCACTACTACATGCTACTAGTAGACGGCGCCAGTTGGGACGAAGTTTCCTCGGAGGCT GACGGGCCGGCGCCGGCAGAGGGTCCAGACGACGAGCTGTGGCTGCCCAGGGCCGGACCG CCACCGAGGGTCGTCAACGTCGACGACTACGGAGCCGCGGATGCCGGCGTCGACGCCGCC GAGGCTTTCCTCGCGGCGTGGAGCGAGGCCTGCAACTCCTCCGCCGGGCGGTCCGTGTTC CTCGTGCCCGAGGGCAAGGCGTACCTCCTGATGCCCGTGAGCTTCCGCGGGCCCTGCAGA GCTGCCTCGGTCGCTGCAATGATAAAGGGGACGCTGGAGGCGCCGTCGGACCGGTCGGTG TGGCTGGAGCGCGGCCTGCAGGAGTGGATCACGTTCGAGGGCGTCGACCGTCTCCGCGTC CTCGGCGGCGGGACGCTCGACGGCAACGGGATGCAGTGGTGGATCAACTCGTGCAAGCTC AACAGATCAGCGCGCTGCGTCACCGGCCCGACGGCGCTGTACTTGAGGAGGTGCACCCGG CTGGTGGTGGAGGAGCTGCAGGTGAGGGACAGCATGCAGATGCACGTGGCGATCGCCTAC TCGCGGGACGTGGCCGTGTCGAGGCTGTCCATCACGGCGCCGGCGTGGAGCCCCAACACG GACGGCATCCACGTGTCCAACAGCAGGGAGGTGTCCATAAGCAGGTGCACCATCGCCACA GGTGATGACTGCGTATCCATCGTGACTGGCTCAACGTTCGTACGGGTGACCAGCATATTC TGCGGACCGGGCCATGGAATAAGCATTGGTAGTCTAGGAGCAAACAACTCATGGGCCCAC GTCTCCGACGTCCTCGTGGAGAAGGCCACGCTGCTGGGCACGACCAACGGCGTCAGGATC AAGACCTGGCAGGGAGGGTATGGCTACGCCGAGAGAATTAGCTTCCGAGACATATCGATG CGCAACGTCACTAACCCGATAATTATAGACCAGAACTACTGCGACTCCGCCAGGACGACG ACACCGTCTTCTTGTCACGACCAGGGATCGGCGGTGGCCGTGCGTAATATAAGCTACAGA AACATACATGGAACCAGCGCTTCCAGAGTCGCCATCAGTCTCGTCTGCAGCGCCGCTCTG CGTTGCGACGGTATACGGATGCAGGATGTCTACCTGGTCGGAGAAGGAAGATACGCTACG TGCTCTTACAGGAACGCCACCGTCGTACAGTCTGGGTATACCTTCCCCTTTTGCAGTGCG GAAATGTAG

Peptide Sequence

PEP ID	Zm00001d048079_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:149449795:149452163:-1 gene:Zm00001d048079 transcript:Zm00001d048079_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	MLVPSSPLLSSSPPLHSPEPPPHLRMGGSTTTVVVMLIVVLHYYMLLVDGASWDEVSSEA DGPAPAEGPDDELWLPRAGPPPRVVNVDDYGAADAGVDAAEAFLAAWSEACNSSAGRSVF LVPEGKAYLLMPVSFRGPCRAASVAAMIKGTLEAPSDRSVWLERGLQEWITFEGVDRLRV LGGGTLDGNGMQWWINSCKLNRSARCVTGPTALYLRRCTRLVVEELQVRDSMQMHVAIAY SRDVAVSRLSITAPAWSPNTDGIHVSNSREVSISRCTIATGDDCVSIVTGSTFVRVTSIF CGPGHGISIGSLGANNSWAHVSDVLVEKATLLGTTNGVRIKTWQGGYGYAERISFRDISM RNVTNPIIIDQNYCDSARTTTPSSCHDQGSAVAVRNISYRNIHGTSASRVAISLVCSAAL RCDGIRMQDVYLVGEGRYATCSYRNATVVQSGYTFPFCSAEM

Transcript Sequence

Transcript ID	Zm00001d048079_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:149449795:149452163:-1 gene:Zm00001d048079 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	CCAAAGAAGTTGGGTGCTAATGCAGTAATGCTCGTCCCTTCCTCTCCTCTCCTCTCCTCG TCTCCTCCCCTCCATTCGCCTGAGCCTCCTCCCCATCTCCGGATGGGTGGCTCCACCACC ACCGTCGTCGTCATGCTGATCGTCGTTCTTCACTACTACATGCTACTAGTAGACGGCGCC AGTTGGGACGAAGTTTCCTCGGAGGCTGACGGGCCGGCGCCGGCAGAGGGTCCAGACGAC GAGCTGTGGCTGCCCAGGGCCGGACCGCCACCGAGGGTCGTCAACGTCGACGACTACGGA GCCGCGGATGCCGGCGTCGACGCCGCCGAGGCTTTCCTCGCGGCGTGGAGCGAGGCCTGC AACTCCTCCGCCGGGCGGTCCGTGTTCCTCGTGCCCGAGGGCAAGGCGTACCTCCTGATG CCCGTGAGCTTCCGCGGGCCCTGCAGAGCTGCCTCGGTCGCTGCAATGATAAAGGGGACG CTGGAGGCGCCGTCGGACCGGTCGGTGTGGCTGGAGCGCGGCCTGCAGGAGTGGATCACG TTCGAGGGCGTCGACCGTCTCCGCGTCCTCGGCGGCGGGACGCTCGACGGCAACGGGATG CAGTGGTGGATCAACTCGTGCAAGCTCAACAGATCAGCGCGCTGCGTCACCGGCCCGACG GCGCTGTACTTGAGGAGGTGCACCCGGCTGGTGGTGGAGGAGCTGCAGGTGAGGGACAGC ATGCAGATGCACGTGGCGATCGCCTACTCGCGGGACGTGGCCGTGTCGAGGCTGTCCATC ACGGCGCCGGCGTGGAGCCCCAACACGGACGGCATCCACGTGTCCAACAGCAGGGAGGTG TCCATAAGCAGGTGCACCATCGCCACAGGTGATGACTGCGTATCCATCGTGACTGGCTCA ACGTTCGTACGGGTGACCAGCATATTCTGCGGACCGGGCCATGGAATAAGCATTGGTAGT CTAGGAGCAAACAACTCATGGGCCCACGTCTCCGACGTCCTCGTGGAGAAGGCCACGCTG CTGGGCACGACCAACGGCGTCAGGATCAAGACCTGGCAGGGAGGGTATGGCTACGCCGAG AGAATTAGCTTCCGAGACATATCGATGCGCAACGTCACTAACCCGATAATTATAGACCAG AACTACTGCGACTCCGCCAGGACGACGACACCGTCTTCTTGTCACGACCAGGGATCGGCG GTGGCCGTGCGTAATATAAGCTACAGAAACATACATGGAACCAGCGCTTCCAGAGTCGCC ATCAGTCTCGTCTGCAGCGCCGCTCTGCGTTGCGACGGTATACGGATGCAGGATGTCTAC CTGGTCGGAGAAGGAAGATACGCTACGTGCTCTTACAGGAACGCCACCGTCGTACAGTCT GGGTATACCTTCCCCTTTTGCAGTGCGGAAATGTAGTACTAGTAGCACCTACACATGAAC TTAGGGCTCATTTGGTTTAGCTTTTGAACCTGTTTTTGTTTTTGTTTTTACAAAAAGCCA ACCAATATAATGAGATGAAAAATCATAGTTGTGTGCGCAGTACAAACACA