Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048076_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:9:149401509:149406529:-1 gene:Zm00001d048076 gene_biotype:protein_coding transcript_biotype:protein_coding description:myosin-related
Sequence

ATGTCGGCGCGGCGGGCGGCCAAGAGCCAGCACGCGGCGGCGACGCCGAGGACCATCAAC
CTCAACCTGGCGAGGAGGCCGGGCGGCGGGAGGCCCAGCCGGGGCGCGGGGCGCGCGCAG
ACCCGCCCGGCGCCGCCGCAGCCGGCGAGGCAGGTGCAGGTCAACCTCGGCGCGCTGTTC
GAGATGGAGCGCCGCGTGCGCGGGCTGGAGTCCGCACCGCCATCGCCGGCGCCGGCGTCG
CAGTCGCAGGAAGACGCCGAGGAACGGGAGGAGAAGTGGCAGTTCCAGGCGGAGATACTC
CGCGCCGAGTGCAACTTCCTCCGGATGGAGCGCGAGGTCGCGCTGCGCAAGCTCGACCGC
CACCGCGGCCAGATGGAGGCCGCGCTCAAGTCCGCCGTCGAAACGCTCGTATCGGGGAGG
AAGAAGGTCGACGGGAAGGGCGACGTCGGCGTTGCGGCGGCGCTGGACGAGGGGATCGAG
GACCTCGAGGAGATGATGGAGGAGCTGCGTGTGGAGAAGGAGAGCGGGAGGAGGGCGATG
GGCGGTGCCCGTGAGCTGCAGCGGAGCCGCGGCAGGAACTTCGATCGGCAGGCGTCCTCG
CTCCGCCGGCGCCTCGAGAAGATGCCGCCTGCCAATCCCGATCCCCTCGTCAAGGACATC
CGCGAGATCGCCCTGCCCGTCCCCGCGCCACCGCCACCGCCACCAGCGGCTGAGCAAAGC
GGCGACGATGAACGCGTCCACGGCGCCAACACCTCTGATGTGGAAATGCTGAGGATGAAG
ATGGAGGGGATGTCAAAGGGCATGCGCGAGCGGATGGCGGAGTACAGCCGGCGCCTGGAA
GCCGTCGCCTCCGGCGACAACGCTGGCTGCCAGTCAAGGAAATGCGGCAACCGGCACAGC
CGAAAGGCGAGCGCAGGCAGCCAGAGAAGCTGGAGCGGGGGCAGCACCGCGAGCAACGGC
AACGCCCCGTCGGCCCTCGACGCCGGCCCGCACGCCCGCAGCCGCCAGAACGTGGCGGCG
GAGAAGCGTCAGCAGCAGCACGTGATTATGTCTGGAGAGTGCAAATTGGTGGGCTCCGCA
AGTTGCAGGGACTGCAGGGAAATCATGTGGAAGATAATGGAGCAAGTAAATGCAGAATCT
GATCAATGGACTGAGATGCAAGATATGTTGGAGCAGGTCAGGTTGGAGATGCAAGAGCTG
CAGTCTTCCAGAGATACCTGGCAGCATCGGGCTATGGCTTCTGACATCAGTCTCCGCTCC
TTAAATTCTCAATTACTGGAGTGGAAAAATCGGGGACAGGCGTACGAACAGCGTGCGGAG
GAGCTGCACAGGAAGATTTCAGAGCTCGAAAGCAAGCTACACACTTCCAAAGCCCATTTA
CCAGCCCCAGCTGTTATTCCTAACCAAAATCAGTGGTCAGATGCGTGCAAGATGGAGCAC
CCAAGAGGAAATCCTCAGCACCAGCCATCCAAGGAACCCGGCAAGGAGGAGATCAAGAAG
CACGTCCTCATCTGCCGCGTGAAGCACTCGCCCAGCAGCGTGCTCCCGAAGCGGTCGCCG
TTCCAGGAGATAGGCAACATCAGGTTGCCGCGGCATCGGTGA

Peptide Sequence

PEP ID

Zm00001d048076_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:9:149401509:149406529:-1 gene:Zm00001d048076 transcript:Zm00001d048076_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:myosin-related
Sequence

MSARRAAKSQHAAATPRTINLNLARRPGGGRPSRGAGRAQTRPAPPQPARQVQVNLGALF
EMERRVRGLESAPPSPAPASQSQEDAEEREEKWQFQAEILRAECNFLRMEREVALRKLDR
HRGQMEAALKSAVETLVSGRKKVDGKGDVGVAAALDEGIEDLEEMMEELRVEKESGRRAM
GGARELQRSRGRNFDRQASSLRRRLEKMPPANPDPLVKDIREIALPVPAPPPPPPAAEQS
GDDERVHGANTSDVEMLRMKMEGMSKGMRERMAEYSRRLEAVASGDNAGCQSRKCGNRHS
RKASAGSQRSWSGGSTASNGNAPSALDAGPHARSRQNVAAEKRQQQHVIMSGECKLVGSA
SCRDCREIMWKIMEQVNAESDQWTEMQDMLEQVRLEMQELQSSRDTWQHRAMASDISLRS
LNSQLLEWKNRGQAYEQRAEELHRKISELESKLHTSKAHLPAPAVIPNQNQWSDACKMEH
PRGNPQHQPSKEPGKEEIKKHVLICRVKHSPSSVLPKRSPFQEIGNIRLPRHR

Transcript Sequence

Transcript ID

Zm00001d048076_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:149401509:149406529:-1 gene:Zm00001d048076 gene_biotype:protein_coding transcript_biotype:protein_coding description:myosin-related
Sequence

TGCACCCGGCCTTTTTCCTCCCAGCGCCTTCTCCCTCTCCGACCAACACCTTCCACAGAC
CCAAAGCAACCCGACCGTTGCCGGTGCCGCCTCAGCCCCAGGAAAAAGGAAGCCCCTCGT
CCGTCAACATCCCTGGTCCTGTCATCCACGCGCGCACGTTCACCGGCGGCCCCTCTCTTT
CAGTTCGGTCGGAGGGCCAACCCGACCTCCGAGGCCTGAGCGGCCTCGATGTCGGCGCGG
CGGGCGGCCAAGAGCCAGCACGCGGCGGCGACGCCGAGGACCATCAACCTCAACCTGGCG
AGGAGGCCGGGCGGCGGGAGGCCCAGCCGGGGCGCGGGGCGCGCGCAGACCCGCCCGGCG
CCGCCGCAGCCGGCGAGGCAGGTGCAGGTCAACCTCGGCGCGCTGTTCGAGATGGAGCGC
CGCGTGCGCGGGCTGGAGTCCGCACCGCCATCGCCGGCGCCGGCGTCGCAGTCGCAGGAA
GACGCCGAGGAACGGGAGGAGAAGTGGCAGTTCCAGGCGGAGATACTCCGCGCCGAGTGC
AACTTCCTCCGGATGGAGCGCGAGGTCGCGCTGCGCAAGCTCGACCGCCACCGCGGCCAG
ATGGAGGCCGCGCTCAAGTCCGCCGTCGAAACGCTCGTATCGGGGAGGAAGAAGGTCGAC
GGGAAGGGCGACGTCGGCGTTGCGGCGGCGCTGGACGAGGGGATCGAGGACCTCGAGGAG
ATGATGGAGGAGCTGCGTGTGGAGAAGGAGAGCGGGAGGAGGGCGATGGGCGGTGCCCGT
GAGCTGCAGCGGAGCCGCGGCAGGAACTTCGATCGGCAGGCGTCCTCGCTCCGCCGGCGC
CTCGAGAAGATGCCGCCTGCCAATCCCGATCCCCTCGTCAAGGACATCCGCGAGATCGCC
CTGCCCGTCCCCGCGCCACCGCCACCGCCACCAGCGGCTGAGCAAAGCGGCGACGATGAA
CGCGTCCACGGCGCCAACACCTCTGATGTGGAAATGCTGAGGATGAAGATGGAGGGGATG
TCAAAGGGCATGCGCGAGCGGATGGCGGAGTACAGCCGGCGCCTGGAAGCCGTCGCCTCC
GGCGACAACGCTGGCTGCCAGTCAAGGAAATGCGGCAACCGGCACAGCCGAAAGGCGAGC
GCAGGCAGCCAGAGAAGCTGGAGCGGGGGCAGCACCGCGAGCAACGGCAACGCCCCGTCG
GCCCTCGACGCCGGCCCGCACGCCCGCAGCCGCCAGAACGTGGCGGCGGAGAAGCGTCAG
CAGCAGCACGTGATTATGTCTGGAGAGTGCAAATTGGTGGGCTCCGCAAGTTGCAGGGAC
TGCAGGGAAATCATGTGGAAGATAATGGAGCAAGTAAATGCAGAATCTGATCAATGGACT
GAGATGCAAGATATGTTGGAGCAGGTCAGGTTGGAGATGCAAGAGCTGCAGTCTTCCAGA
GATACCTGGCAGCATCGGGCTATGGCTTCTGACATCAGTCTCCGCTCCTTAAATTCTCAA
TTACTGGAGTGGAAAAATCGGGGACAGGCGTACGAACAGCGTGCGGAGGAGCTGCACAGG
AAGATTTCAGAGCTCGAAAGCAAGCTACACACTTCCAAAGCCCATTTACCAGCCCCAGCT
GTTATTCCTAACCAAAATCAGTGGTCAGATGCGTGCAAGATGGAGCACCCAAGAGGAAAT
CCTCAGCACCAGCCATCCAAGGAACCCGGCAAGGAGGAGATCAAGAAGCACGTCCTCATC
TGCCGCGTGAAGCACTCGCCCAGCAGCGTGCTCCCGAAGCGGTCGCCGTTCCAGGAGATA
GGCAACATCAGGTTGCCGCGGCATCGGTGAGCATGGGTGGGCAGGTGGCCATGTGTTATG
TGAGACTGTGACCTGTGTGAGTGATGGGCTGCTGCAGCGAAACTGCGAAGGATTCAGGCG
CAAGCGTCCACAGTAGCATCGATCAGCTTCTACGTAATAAATAATTTATTTGTGACCCAC
TGATGAGTAACATGGCCCGCCTGACTGTCAGATCGGTAGTAATAATCATAAGTAGTCAGT
ACAGTGATGAATAGGTGAGAT