Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d048040_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:148600630:148609977:-1 gene:Zm00001d048040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Centromere protein-like
Sequence	ATGAGAAGATTCTTTTTCTTTGGGTCCTCCGCTGCAAATGCTGGCGACGAAAACGGGACA CCGGGCAGTGATAGCGGGACTACGCATAAAAAGACACTGGTGGCAGATGTGGGCAACGAA AGTTCTGGTTCCTGCAGCACAAGGTTGTCAAGATCCAGAAGCCGTGGTCAAAAGCGGAAT AAGGAGGAACCAGCCAATCCGAAGCAGCTCAGGAGGTCCATGTCATTCTCGTCTCCGGCC ACAAACACTTGCTTAGACGAACGATGCTTTAGTTTCTCTGGTGATGTTCCATGCACTTTG TATGATGGATTTGATGCACCTCAGAATGTCAAAGATGTTGCCCCCAACATATGGTCACCA GAAGGAAATCCAGTTTTGAGAGAATATGCAATAAATATCCCAAAAGATCATTCTTCCATG GAAAACGATTCTCCTCGTTCAAGATGTTGTTCATGCTCGGCAGGGCACTCTCCTGTTAGC TCTCCCATTGCTCTTCGATGCAGGTCAACAAGACTAAGCAATCTATTAAGCAAGAATGAA GTACTAGATCGATACATTGATAGAGGGCATGAAGATGCAATGGTAAATGAGAAACAGAGG CAGTATCCCTCCGCCGCATCTATGGTTTCTACTTTGGGAAGGCCACCTCGACCCCAATCA ACAGTACCATCCATACCAAAATCAATGAAAGGGAATACAGAGTGCTACCCAGATGTAGAC ATAAAAGAAGACTGCCTTTGGCAAGTTGCTCAAGAGGGTACAAGAGATAACTGCAAGATT ACAACTATGTGCGATGCAGGTAGAAACCACGTAAGCATGCCAGATGCTTTTGAGAGAGAC AGTGCTACATCTGTTGTAGATATTTGTGAAGATTTGCAAGAAGTGAGACCTCCAAATGTT ATTTGCCCCTCCGCTTGTCCTATTTCAGGGGAGCAAGAAACCAATGACATGTTGCTGCAA AGAGCTAAAGAAGTTGAGTCAAGGTTCATTGTTCATTGTGGAGATGAATATGAATTCAAC ATTATCAGAGATAAGCGAATGAGCTCAAATGACATGTTTCAGTTGATCCAGCAGTTGACA GAAGATAGGAAACAGTTAACGCATGAACTGTCTTCACATATAAGAGCACACGTTGCAGAA AGATCTGCTGCCAAACAGCAATACAAACAATCAAAGAAAGAACTAGATACCAGAACTAGG AGGTTGGAGAAGGAGAAGAGTGAAAGACAAACTACACTGGAGAGAGAGATGGACAGAAGG TCACATGATTGGTCTGTCAAACTATCAAGATTTCAATCTGAAGAAGAGAGACTACATGAA CGGGTGAGAGAACTTGCAGAGCAGAATGTGTCATTTCAAAGAGAAGTTGCCTTTCTTGAA GCAAATAAGGCTGAAGCTTCAACCAAAGTTGCTAGTTTGGAATTGCAAAACAACAAATTA AATGACGATCTAGAGAAACTTAGAAACGAGCATGAGAAGCTCCATAATTCCTCAGTAGAT AAGGATGCTCGTTTTGCTGAGGTTGTTGAGGAAAGGGACCACACCAGGGAATACTTGAAG GACAAGGAGGGAGAGAACAAAGCATTGCACAAAGTGATTGCCAGACTACAAACAACATGT AATGAACAGGAAAGAGCAATCACAAGTCTAAGACAGGGATGCAAAGCTCAATTAGACAAG AAATTTGTTGAGTGTGACAGTGATAAAATGAGGAAATTGCGAATGGAACTGATTAGACTG ACAGGGGTGGAGCAAAAGTTGAGATGTGAAATTCGTTCTTGTCATCTTGAAGTTGGGTCC CTCAGACAAGAGAACATTGCACTCTTAAATCGTTTACAAGTTGTTGGAAATGGAGCACCC TTCTCAATTCGCCTTGACCAAGAGCTTCAGGCTAGAGTGGACAACCTGCAGGTGCAAGGC TTGTCATTGCTTAATAAGACCAGCCAACTTTGCACCAAATTGTTGGATTTGATGAAACAC AAGAAACTTGAAAATGAGTCTTTCAGTGGCAATGATGTGTTGATAGTCAGTAATTACACT TTTGAGTACCAAAGCATCAAAGGAGGAATTGAAAGTTTGAAGCGAAGTTTGAAGACAATA AATTCTGTACTGAATGAAAAGCAAAGTGTAAAAGAAAAATCTGGTGAGACTGCAGCTAGA GGTAGTTCTTCCAGGGAGCAAACGGATGATTTTGGACTCAAGCTGAAAGAAGAGGCTATG CTCAGTAGAGTATTAAAGGAGGCACTCTTGTCAAAGGAACTTGACAATGGGCAATTGGAG TCTGATCTGTCATCTTCACTTCGTATCCAAGATGTTATGAGAAATGAGACCCAGAGAGTT CAGGATGAACTTTCTTGCATCACCCACAAGGCTAAGCAGTTAGAGCTTCAGGTATCCAAG AAGGATGAAGCGATCAATGAGCTCCAACAGGACTTGCAGGAATCTGCCAAGGAGCTTGCG TCTCTACGCGGAACACTGAAAACAGTGACTGAGGAGAGGGACCTTTCCTGGCAGGAATCC AAGCAGCTCAGACGAAACATCAACATCATGCAGAACGAGGTCGTGTCACTGAAGAAGAAG ATTGAAGCCTTGGACGAAGACATACTCCTCAAGGAAGGGCAGATAACAATACTGCAGGAT AGCATCGACAAGCCGTTCGACATCATTTGCAGCCCTAGGTCCATGAGAGAGTTTGACATG GAGTGA

Peptide Sequence

PEP ID	Zm00001d048040_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:148600630:148609977:-1 gene:Zm00001d048040 transcript:Zm00001d048040_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Centromere protein-like
Sequence	MRRFFFFGSSAANAGDENGTPGSDSGTTHKKTLVADVGNESSGSCSTRLSRSRSRGQKRN KEEPANPKQLRRSMSFSSPATNTCLDERCFSFSGDVPCTLYDGFDAPQNVKDVAPNIWSP EGNPVLREYAINIPKDHSSMENDSPRSRCCSCSAGHSPVSSPIALRCRSTRLSNLLSKNE VLDRYIDRGHEDAMVNEKQRQYPSAASMVSTLGRPPRPQSTVPSIPKSMKGNTECYPDVD IKEDCLWQVAQEGTRDNCKITTMCDAGRNHVSMPDAFERDSATSVVDICEDLQEVRPPNV ICPSACPISGEQETNDMLLQRAKEVESRFIVHCGDEYEFNIIRDKRMSSNDMFQLIQQLT EDRKQLTHELSSHIRAHVAERSAAKQQYKQSKKELDTRTRRLEKEKSERQTTLEREMDRR SHDWSVKLSRFQSEEERLHERVRELAEQNVSFQREVAFLEANKAEASTKVASLELQNNKL NDDLEKLRNEHEKLHNSSVDKDARFAEVVEERDHTREYLKDKEGENKALHKVIARLQTTC NEQERAITSLRQGCKAQLDKKFVECDSDKMRKLRMELIRLTGVEQKLRCEIRSCHLEVGS LRQENIALLNRLQVVGNGAPFSIRLDQELQARVDNLQVQGLSLLNKTSQLCTKLLDLMKH KKLENESFSGNDVLIVSNYTFEYQSIKGGIESLKRSLKTINSVLNEKQSVKEKSGETAAR GSSSREQTDDFGLKLKEEAMLSRVLKEALLSKELDNGQLESDLSSSLRIQDVMRNETQRV QDELSCITHKAKQLELQVSKKDEAINELQQDLQESAKELASLRGTLKTVTEERDLSWQES KQLRRNINIMQNEVVSLKKKIEALDEDILLKEGQITILQDSIDKPFDIICSPRSMREFDM E

Transcript Sequence

Transcript ID	Zm00001d048040_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:148600630:148609977:-1 gene:Zm00001d048040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Centromere protein-like
Sequence	TGTTGCCATTGCGAGAATTGGTCTGAGTCAGTACTAGCAACAAGCACATCATTCTGGTTC TTGAACACCTGCACCAGAGTTTCAGTGGATGGATGGTCGAAATCATCTTCTGACTCTGAA AAAAAAATCCCCATTTCTCGAAGATGCCTAAGTGGCCCTAACGCCATCAGCATTTTCAAT GTCCTGACTGCCCTCTCTAGCACCTGGAGATGAAGATTGAGCAGGAACTAACACTTCCTC AGTAGTTTTCACCGAGTTCCTCCCTGCACTCATCATATGATTGACGTACAAAATAGATGG TGACGCATTTGTTATTGACTCTCCAAAACATTTCCTTAGAAGAGAACCTATTTCTCTCAA AGACAGAATATAAGCACAGTGAGAAGCTGCAAGTGCACATCTTCCATCTAGTGCTTCTCT AACAAGACGCTAGACGCTTCCTCTCCCGGCAGCACAACACAAGGACCTTGTTATCTTCAA GCTTAGAAGGTGCCACGCCCATTTTGAAGAGCAACAGCACTCAGAGTGTCATGGACAATA CAAGGGCATGTCAATTTGAGGCCACCCACTGACGATTGCAAGTAACAATATTTGTGTGAT TGGGTTTTCCACGTCTGATGCTAGCTGTAAGAGGATGGAACCAGTGAACGAACATGTAGC GCTCCAGGGTCTGACACCAAATGGTTTTATCCTGGGACAACCATTTGACGCCGCCACGTA TTTATATTTTAGTCCTTGTCATCATTCATTTTTGTGCCAGCCCCCCTGGCGCCGCCACGT ACTATTTTTTGCAAAAAAAATATTTAAAATATAAAAATAAAAAATGCCGTCCTCCATTCC TACCTACCAACCCGCTCCCCCTCGCCGCTCCCCAATTCAAAACCCGTATCTTTTTCTTAC CGCTGCGAAAAAGGAAAGCCAGCTGTTAATCGCAATTAGCAGGCGCTAATCAAAACCCCC CGCCCGACCGTTACTTTGCCCTCACATCCATATTCCATACCACACCACACCGCAGCCCGA CTTCGCCTCACCTCGCCACGCTTGGGATTCCCGCAGGTTTGCCTCCTGCTTCTTCTCTAC TCCGCCGCAATGGCCTTCGGGCTCCAGGTTCTCGTTGGGTTTTAGTTCCGGGTGTAGTCG GTGCGGGTGGTTCTGGATTCCGCGTCGGGTTTTGGCTGAATTGGTGCGCTGGGTCGAGGA TCGGTGGGGCGTCCTTGAATCGCCGGTGGTTCTGGGATCGAGGATCGACGGGACACGGCT CGCTAGGCGAATGTCTGGTTCTGTTTCGATTTTTTGGTTCAGTTGCCCTTCTGATTGAAT TTTGCGCGGTTCGGTTCGGTGCCCTACGATCGAGGACCAAACAAGTACTGTTCGCTTTTA CTTGGTGCCGGTGGCTGTGCGTGTAACATGTTCGATTGATTTCCTACTCGAGGTAGTGAG ATGCTGGCGTGGAGGACATGTGCAACTTCAGTTGGGAGATGACAGCTAGTTATTTCCAAT GTTATGTGGAAATTACTGAACATTTCCTTGCGATCTTTACAAAAAAAATCCTTGTAGATT TTCATTTTCTGGGATGATTTTGTTTCCCAAGTCTCTTGTTAATATTTTTGTTAGTTCTCG GCTAATTCGTAAAGAAAGCACTTGTTGTCTTGTTACTTCAGATGTACAGTACAGCTTGCT ACATAATATTTCATATAGTTAATGCTTTGCTTACCAAGACCCGATCCATGCAGGGATCCA ATTTCTGGTGAATCTTCCGTACTTCTAATTCCTGAAATATGAGAAGATTCTTTTTCTTTG GGTCCTCCGCTGCAAATGCTGGCGACGAAAACGGGACACCGGGCAGTGATAGCGGGACTA CGCATAAAAAGACACTGGTGGCAGATGTGGGCAACGAAAGTTCTGGTTCCTGCAGCACAA GGTTGTCAAGATCCAGAAGCCGTGGTCAAAAGCGGAATAAGGAGGAACCAGCCAATCCGA AGCAGCTCAGGAGGTCCATGTCATTCTCGTCTCCGGCCACAAACACTTGCTTAGACGAAC GATGCTTTAGTTTCTCTGGTGATGTTCCATGCACTTTGTATGATGGATTTGATGCACCTC AGAATGTCAAAGATGTTGCCCCCAACATATGGTCACCAGAAGGAAATCCAGTTTTGAGAG AATATGCAATAAATATCCCAAAAGATCATTCTTCCATGGAAAACGATTCTCCTCGTTCAA GATGTTGTTCATGCTCGGCAGGGCACTCTCCTGTTAGCTCTCCCATTGCTCTTCGATGCA GGTCAACAAGACTAAGCAATCTATTAAGCAAGAATGAAGTACTAGATCGATACATTGATA GAGGGCATGAAGATGCAATGGTAAATGAGAAACAGAGGCAGTATCCCTCCGCCGCATCTA TGGTTTCTACTTTGGGAAGGCCACCTCGACCCCAATCAACAGTACCATCCATACCAAAAT CAATGAAAGGGAATACAGAGTGCTACCCAGATGTAGACATAAAAGAAGACTGCCTTTGGC AAGTTGCTCAAGAGGGTACAAGAGATAACTGCAAGATTACAACTATGTGCGATGCAGGTA GAAACCACGTAAGCATGCCAGATGCTTTTGAGAGAGACAGTGCTACATCTGTTGTAGATA TTTGTGAAGATTTGCAAGAAGTGAGACCTCCAAATGTTATTTGCCCCTCCGCTTGTCCTA TTTCAGGGGAGCAAGAAACCAATGACATGTTGCTGCAAAGAGCTAAAGAAGTTGAGTCAA GGTTCATTGTTCATTGTGGAGATGAATATGAATTCAACATTATCAGAGATAAGCGAATGA GCTCAAATGACATGTTTCAGTTGATCCAGCAGTTGACAGAAGATAGGAAACAGTTAACGC ATGAACTGTCTTCACATATAAGAGCACACGTTGCAGAAAGATCTGCTGCCAAACAGCAAT ACAAACAATCAAAGAAAGAACTAGATACCAGAACTAGGAGGTTGGAGAAGGAGAAGAGTG AAAGACAAACTACACTGGAGAGAGAGATGGACAGAAGGTCACATGATTGGTCTGTCAAAC TATCAAGATTTCAATCTGAAGAAGAGAGACTACATGAACGGGTGAGAGAACTTGCAGAGC AGAATGTGTCATTTCAAAGAGAAGTTGCCTTTCTTGAAGCAAATAAGGCTGAAGCTTCAA CCAAAGTTGCTAGTTTGGAATTGCAAAACAACAAATTAAATGACGATCTAGAGAAACTTA GAAACGAGCATGAGAAGCTCCATAATTCCTCAGTAGATAAGGATGCTCGTTTTGCTGAGG TTGTTGAGGAAAGGGACCACACCAGGGAATACTTGAAGGACAAGGAGGGAGAGAACAAAG CATTGCACAAAGTGATTGCCAGACTACAAACAACATGTAATGAACAGGAAAGAGCAATCA CAAGTCTAAGACAGGGATGCAAAGCTCAATTAGACAAGAAATTTGTTGAGTGTGACAGTG ATAAAATGAGGAAATTGCGAATGGAACTGATTAGACTGACAGGGGTGGAGCAAAAGTTGA GATGTGAAATTCGTTCTTGTCATCTTGAAGTTGGGTCCCTCAGACAAGAGAACATTGCAC TCTTAAATCGTTTACAAGTTGTTGGAAATGGAGCACCCTTCTCAATTCGCCTTGACCAAG AGCTTCAGGCTAGAGTGGACAACCTGCAGGTGCAAGGCTTGTCATTGCTTAATAAGACCA GCCAACTTTGCACCAAATTGTTGGATTTGATGAAACACAAGAAACTTGAAAATGAGTCTT TCAGTGGCAATGATGTGTTGATAGTCAGTAATTACACTTTTGAGTACCAAAGCATCAAAG GAGGAATTGAAAGTTTGAAGCGAAGTTTGAAGACAATAAATTCTGTACTGAATGAAAAGC AAAGTGTAAAAGAAAAATCTGGTGAGACTGCAGCTAGAGGTAGTTCTTCCAGGGAGCAAA CGGATGATTTTGGACTCAAGCTGAAAGAAGAGGCTATGCTCAGTAGAGTATTAAAGGAGG CACTCTTGTCAAAGGAACTTGACAATGGGCAATTGGAGTCTGATCTGTCATCTTCACTTC GTATCCAAGATGTTATGAGAAATGAGACCCAGAGAGTTCAGGATGAACTTTCTTGCATCA CCCACAAGGCTAAGCAGTTAGAGCTTCAGGTATCCAAGAAGGATGAAGCGATCAATGAGC TCCAACAGGACTTGCAGGAATCTGCCAAGGAGCTTGCGTCTCTACGCGGAACACTGAAAA CAGTGACTGAGGAGAGGGACCTTTCCTGGCAGGAATCCAAGCAGCTCAGACGAAACATCA ACATCATGCAGAACGAGGTCGTGTCACTGAAGAAGAAGATTGAAGCCTTGGACGAAGACA TACTCCTCAAGGAAGGGCAGATAACAATACTGCAGGATAGCATCGACAAGCCGTTCGACA TCATTTGCAGCCCTAGGTCCATGAGAGAGTTTGACATGGAGTGAAGAGTGCGGCGAAGAA CATTGTCCTTTTCAGATATGATGTGCATTTCGTGAAAGACAGAGAGGTGCTTGTGAATAC GTCGGCGTTCATACGATTCCGCAGTGTCTTCGTGCGGTATATCGTAGTGGCTTGTTTTGG AACTCATTGCTCGGTTTACACCATTTGTAAAGCGTGCATAACTTGAGATATGATATGGGT AGTCCTTGTCCAATT