Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048028_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:148355084:148360632:-1 gene:Zm00001d048028 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec-independent protein translocase protein TATC chloroplastic
Sequence

ATGGGAAGCACAGGGGCGCTGCTTTGGCACCCGTCGCCGCAGGTGCACTCCGGTGGCGTC
CTCTTCCGCCAGAGCCGGCGCATCGTACGCCAGCGCAACTTGCCTCTATTATCGCTAGCT
GACGCGGCGCTTGAGCCCGAGCGCCGCCGCGGGCAGCGCCTCCGCTGCGCTGCCGGCGAC
GGGGACGGCGGGCCCCGGGAGGCTCAGAAGGAGTCTCCGAGCGGCATCGGCGCAGCACTC
GAGGATCCGTCTCCAGGACCTCCTGTGGAAAACGGTTCCTTCAGAAGCCCCTCACAGGAA
GAACAGAGTGCTCTGTATAATTTTCTCTATCCAAGCAAAGACTTACTTCCAGATGATAAG
GAGATGAGTATATTTGATCATCTGGAGGAGCTTCGCGAGAGGATTTTCATCTCAGTTTTG
GCTGTTGGGGCTGCGATACTAGGCTGTTTTGCTTTTTCAAAAGATCTGGTTCTTTTTCTA
GAGGCACCAGTGACTGTTCAGGGTGTTCGGTTTTTGCAGCTCTCGCCTGGGGAATTTTTC
TTTACAACATTAAAGGTTTCAGGTTATTGTGGCCTTTTACTTGGAAGTCCTATCATTTTA
TATGAGATCATTGCATTTGTTATCCCAGGTTTAACAAGGGATGAGCGGAAATTTCTCGGG
CCTATTGTGTTGGGTTCTTCTGTTCTATTCTACCTAGGCATTTTCTTCTCCTACACGGTT
CTCAGCCCTGCTGCGTTGAACTTCTTTGTGAATTATGCAGATGGGGCAGTGGAATCGTTG
TGGTCAATAGACCAGTACTTCGAATTCATACTTGTGCTGATGTTTAGCACAGGGTTGTCC
TTTCAGGTCCCTGTTATCCAGCTTCTGCTAGGACAACTTGGATTGGTTTCTAGTGACCAA
ATGCTTTCGATCTGGAGATATGTTGTTGTTGGCGCTGTCGTCGCTGCTGCTGTGCTTACA
CCTTCGACGGATCCGTTGACACAAATGTTGTTGGCTGGTCCTTTGCTTGGTTTGTACTTG
GGTGGCGCATGGATGGTCAAGCTAACTGGGCGATAA

Peptide Sequence

PEP ID

Zm00001d048028_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:148355084:148360632:-1 gene:Zm00001d048028 transcript:Zm00001d048028_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec-independent protein translocase protein TATC chloroplastic
Sequence

MGSTGALLWHPSPQVHSGGVLFRQSRRIVRQRNLPLLSLADAALEPERRRGQRLRCAAGD
GDGGPREAQKESPSGIGAALEDPSPGPPVENGSFRSPSQEEQSALYNFLYPSKDLLPDDK
EMSIFDHLEELRERIFISVLAVGAAILGCFAFSKDLVLFLEAPVTVQGVRFLQLSPGEFF
FTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLGPIVLGSSVLFYLGIFFSYTV
LSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLSFQVPVIQLLLGQLGLVSSDQ
MLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKLTGR

Transcript Sequence

Transcript ID

Zm00001d048028_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:148355084:148360632:-1 gene:Zm00001d048028 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sec-independent protein translocase protein TATC chloroplastic
Sequence

GAGATAATATCGTGACATCGTCTGTCCGCCACCGGGTATCTCTTTCTCCGGGTAGTGCAC
CAGCGGAACGGCGAGGTGCAGTCGTGCAGACGGGAACGGGGATGGGAAGCACAGGGGCGC
TGCTTTGGCACCCGTCGCCGCAGGTGCACTCCGGTGGCGTCCTCTTCCGCCAGAGCCGGC
GCATCGTACGCCAGCGCAACTTGCCTCTATTATCGCTAGCTGACGCGGCGCTTGAGCCCG
AGCGCCGCCGCGGGCAGCGCCTCCGCTGCGCTGCCGGCGACGGGGACGGCGGGCCCCGGG
AGGCTCAGAAGGAGTCTCCGAGCGGCATCGGCGCAGCACTCGAGGATCCGTCTCCAGGAC
CTCCTGTGGAAAACGGTTCCTTCAGAAGCCCCTCACAGGAAGAACAGAGTGCTCTGTATA
ATTTTCTCTATCCAAGCAAAGACTTACTTCCAGATGATAAGGAGATGAGTATATTTGATC
ATCTGGAGGAGCTTCGCGAGAGGATTTTCATCTCAGTTTTGGCTGTTGGGGCTGCGATAC
TAGGCTGTTTTGCTTTTTCAAAAGATCTGGTTCTTTTTCTAGAGGCACCAGTGACTGTTC
AGGGTGTTCGGTTTTTGCAGCTCTCGCCTGGGGAATTTTTCTTTACAACATTAAAGGTTT
CAGGTTATTGTGGCCTTTTACTTGGAAGTCCTATCATTTTATATGAGATCATTGCATTTG
TTATCCCAGGTTTAACAAGGGATGAGCGGAAATTTCTCGGGCCTATTGTGTTGGGTTCTT
CTGTTCTATTCTACCTAGGCATTTTCTTCTCCTACACGGTTCTCAGCCCTGCTGCGTTGA
ACTTCTTTGTGAATTATGCAGATGGGGCAGTGGAATCGTTGTGGTCAATAGACCAGTACT
TCGAATTCATACTTGTGCTGATGTTTAGCACAGGGTTGTCCTTTCAGGTCCCTGTTATCC
AGCTTCTGCTAGGACAACTTGGATTGGTTTCTAGTGACCAAATGCTTTCGATCTGGAGAT
ATGTTGTTGTTGGCGCTGTCGTCGCTGCTGCTGTGCTTACACCTTCGACGGATCCGTTGA
CACAAATGTTGTTGGCTGGTCCTTTGCTTGGTTTGTACTTGGGTGGCGCATGGATGGTCA
AGCTAACTGGGCGATAAGTGAGTGGTTCATGCAAGGCAATGATGCTCCGGGAAGCAAGAG
CGCCACTGTAACCTAGTCTTGTAAAAATGAATTCACTCTGTTCATCAGATGATATTGTTA
CCATTTCTCTTTCTGAAGTTCATGAGCAGTAGAAAATAGAGGAAACGGTTAGTTAGTTTC
ATCTACAGATCTTGAAGTAACAAATGAATGCGTTGTGGTACAGCCCGAATTAATCATTGT
TGAATAGACTATAAGATGCAAGTTC