Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048023_T012
CDS Infomation

cds chromosome:B73_RefGen_v4:9:148210886:148224607:-1 gene:Zm00001d048023 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP133
Sequence

ATGCTTGCTGGTGGCATTGATAAAGAAACATCCCTTGCGTGGATGATATGCGGAAATGAG
CTTTTTATATGGAACTACTTAGTTTCTGTTGCAAAAGACTGTATTGTACTTGACATTCCA
TCTTCTCTCATCGGATACAATGATGTGAAACCCCTCCTCAGTATTCAGTGGACAGTTTGT
ATAATGAGATGGCACAATAGTGGTGCATCAACAAGGAACAGTGGAGAGATGTTACATAGA
AAAAGTTCAACTGGCGTGATTCTCTGCAACAAAAGAACACAAGCTGTTGCTTATTGGCCT
GATATCAGTGCTGAATCTAGTAGGAGCCCAGTTCTTAGTTCATCAGACCATGGTGAGGTG
TCCACATGTGGTGCTGCATCTGATTTTCTGAGGTTTAATTCGCTTATTGCGGCTGCAGTT
CCAGGATGTATTCACGAGTGCATTGCAATAGCTTCTGAGCCTGCAGGTGCTTTGTGGCTG
TTCCAGTGTTCACCGGAAGGAATTCGTCAAAGAAAAGTTCATGCAGATACATTAGGAGAT
GGTGGGTCTGATCTTTATCAGAAATGTGATGGTGGAAGGTCCTTGGTTTGGTTACCAAGT
AATGTCTCATCTGAGGGTTCTGACCGGAAGTTCTTTTTATTGACAAATAATGAGGTGCAA
TGTTGGAGCATCTCACTCTTGCATGACATCAATGTAAAAAAGTTAGGGTCTCACGAAATT
GTTGGTACTGACGGAGATGTGGGCATTAAGAAAGATATAGCTGGACAGAAAAACATATGG
CTTTTGGACATGCAGATAGATGAGCATGGGAAGGAATTTAGCATTCTTGTTGCTACATTA
TGCAAAGATAGGGTTAGTGGGTCAAACTACACTCAATATTCTCTTCTAACAATGATGTAC
AAACCTAACCAGAAGTTTTCATCTGAAGATAATGTAGCTAAAGTTGAAAGGTTTTTGGAG
AAAAAAGCTCCCTCTCAGGTGATAATTCCTAAGGCTAGGGTAGAGGATGATAAATTCTTG
TTCTCCATGAGGCTAAAAACTGGTGGTAAGCCCTCTGGTTCTGTTATAATCCTGTCAGGT
GATGGAACAGCAACAGTGGCCATGTATTGGAGAGGTTCCACCCGACTTTATCAGTTTGAT
CTGCCTTGGGATGCTGGAAAGGTCCTAGATGCTTCCATTATCCCATCAGCTGAGGACAGA
GATGAAGGTGCTTGGGTTGTTCTAACACAAAAGGCAGGAATCTGGGCGATTCCTGAAAAA
GCTGTATTAGTTGGTGGGGTAGAACCACCAGAGCGCAGCTTGTCACGAAAGGGTAGTTGT
AATGGAACAATTGCTGAGGAGAAAAGAAGTCAGGTCTTCAGTGCTAGTGTTGTTCCCAGG
AGAGCTAGCTCTGAGGCTTGGAGTGCTGGAGAGAGGCAAAGGCCTGCATCAACTGGCATA
GCTCAGCAGTCTGCGGTCGATGAAGAGTCCGAAATGCTATTGAACCAGTTATTTCATGAT
TTTATGATCTCCACTGCAGTTAATGAGGCATTTCAAAAGCTTAAAGCAGCAGGAGCATTT
GAGAAAGAGGGCGAGATGAACATATTTGTTCGGATGAGCAAATCCATTGTAAACACATTA
GCTAAACACTGGACAACAACAAGAGAAGCTGAATTTCTTGCCTCAACAATTGTTTCATCC
CTTGTTGAGAAGCAGCAAAAACACGAGAAATTCCTTCAGTTTCTTGTCTTATCAAAGTGT
CATGAAGAACTCGCTTCAAAGCAAAGAGCAGCAATGCTAACTGTCATGGAGCATGGTGAA
AAGCTCTCTGGAATGGCACACCTTAGGGAGTTACAAAACACACTTATTCAGCATGGCTCA
AGCACCCATTTTTCACCTCAGTCGAAAACCCAAGGTACTGGTGCCCTTTGGAACCTTATT
CAGTTGGTTGGTGAGAAAGCTCGAAGAAACATGGTTCTTTTAATGGATCGTGATAATGCT
GAAGTGTTCTACAGTAGGGTTTCTGATATAGAGGATCTATTTTATTGTTTATCTCATGAA
CTTCAATACATCATTAGTAGAGAAGAACACCCTTCTGTTCAGATGCAACGTGCACTTGAG
TTAGCAAATGCTTGTATCACCATAGTTCAGGCAGCATCACACTACAAGAAGGATCACAAG
GAATGGTATCCATCTCCTGAAGGACTGATAACATGGAACAGCCAACCTGTTCTACGGTCT
GGAATCTGGAATTTGGCATCCTTGATTATGGAGCTTTTGGGAGAATCAGGAGCTGCAGAC
ATGTCAATGAAATCCAGTCTATGGTCTCAGCTGGAAGGACTTACAGATATTCTACTGGAG
GCATATATGTGCCTTTTAACTGCCCAATTTGAACGTGGGCAGGAACATGGTGTGCTAGTG
CAAGAATATTGTGAACGAAGAGATGAACTTCTCAGATCCCTCTACAACCTTGCTAAACAA
ATAGTGGAGGCCAAATACCAGGAGTCAAGAAATGGTGCGGACAAGCCAGATCTGAAGGAA
TCTATACTTAGAGAGGTTATTTCTCCTATTTTAGCGACAGCCAAACGACATGAAGGGTAC
CAAACACTGTGGCAGATTTGCTATGATCTAGATGATTCAGGTCTCCTCCGCAGCCTAATG
CATGATAGCGTAGGGCCTCATGGGGGATTCAGTTTCTTTGTCTTTAAGGAGTTAGTCAAC
AGAGGAGACTACTCTAATCTGTTAAGGCTAGGTGAAGAATTCCAGGAAGAGCTTGCAAGC
TTTCTGAAAGAGCGGAGTGATCTGCTGTGGGTTCATGAGATATGCTTAAACCAGTTCTCA
TCTGCTTCCGACACCCTTCATACCTATGCTCTGCGTCGTAGTCCTGATGGAGATGCCAGC
TTCACAACCAGCAGAAAGCCACTATCCTTTGCTGAAAGAAGACGTCTTCTTTATCTCTCT
AAAATTGCTGCAACAGCAGGTAAGGACATTGATTATGAAGTGAAGGTTGCACGGATAGAA
GCGGACATTCGGATTCTAAAACTGCAGGAAGAAATTGTTCAGCATGATCCAGAATATGCA
CAAGTCAAATCTACAAACACATTGCTTGGTCCATCAGAACTGATTGAGATGTGCTTGAGG
AGAGACCGAGAGCTCTCCCTTAAAGCCTTTGAAGTATTTGCTTTGACAAGCTCATCGTTC
CGAAGTTCCAACAGAGGCCTTCTAGAGGCATGCTGGATGAATGCAACTGACCAAGATGAT
TGGGTAAAGCTTTCAGAGGCATCCATGTCAGAAGGTTGGAGTGACGAGGTCATCGAAGAA
TCTCTTCAAGCAACTGTCCTCTTCAAAGCTTCCAGGTTGTGTTACAGCCCGGATGCTGTG
GTGTATGACGGCACCTTTGAGGATGTTCTGCCTGTGAAGAAAGAGGATGTACATCTGAGA
GGTTTGGAGAGTAAATGTTTGTCAGTTGAAGAAGTGTTGATGCAGCACGAGGATTTTCCA
GATGCTGGTAAATTGATGATGACTGCAGTGATTAGGGGCAAGGAACCAATTTTTACAGCC
ACAGAACCCGTGGAGATGGACTCATGA

Peptide Sequence

PEP ID

Zm00001d048023_P012
PEP Infomation

pep chromosome:B73_RefGen_v4:9:148210886:148224607:-1 gene:Zm00001d048023 transcript:Zm00001d048023_T012 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP133
Sequence

MLAGGIDKETSLAWMICGNELFIWNYLVSVAKDCIVLDIPSSLIGYNDVKPLLSIQWTVC
IMRWHNSGASTRNSGEMLHRKSSTGVILCNKRTQAVAYWPDISAESSRSPVLSSSDHGEV
STCGAASDFLRFNSLIAAAVPGCIHECIAIASEPAGALWLFQCSPEGIRQRKVHADTLGD
GGSDLYQKCDGGRSLVWLPSNVSSEGSDRKFFLLTNNEVQCWSISLLHDINVKKLGSHEI
VGTDGDVGIKKDIAGQKNIWLLDMQIDEHGKEFSILVATLCKDRVSGSNYTQYSLLTMMY
KPNQKFSSEDNVAKVERFLEKKAPSQVIIPKARVEDDKFLFSMRLKTGGKPSGSVIILSG
DGTATVAMYWRGSTRLYQFDLPWDAGKVLDASIIPSAEDRDEGAWVVLTQKAGIWAIPEK
AVLVGGVEPPERSLSRKGSCNGTIAEEKRSQVFSASVVPRRASSEAWSAGERQRPASTGI
AQQSAVDEESEMLLNQLFHDFMISTAVNEAFQKLKAAGAFEKEGEMNIFVRMSKSIVNTL
AKHWTTTREAEFLASTIVSSLVEKQQKHEKFLQFLVLSKCHEELASKQRAAMLTVMEHGE
KLSGMAHLRELQNTLIQHGSSTHFSPQSKTQGTGALWNLIQLVGEKARRNMVLLMDRDNA
EVFYSRVSDIEDLFYCLSHELQYIISREEHPSVQMQRALELANACITIVQAASHYKKDHK
EWYPSPEGLITWNSQPVLRSGIWNLASLIMELLGESGAADMSMKSSLWSQLEGLTDILLE
AYMCLLTAQFERGQEHGVLVQEYCERRDELLRSLYNLAKQIVEAKYQESRNGADKPDLKE
SILREVISPILATAKRHEGYQTLWQICYDLDDSGLLRSLMHDSVGPHGGFSFFVFKELVN
RGDYSNLLRLGEEFQEELASFLKERSDLLWVHEICLNQFSSASDTLHTYALRRSPDGDAS
FTTSRKPLSFAERRRLLYLSKIAATAGKDIDYEVKVARIEADIRILKLQEEIVQHDPEYA
QVKSTNTLLGPSELIEMCLRRDRELSLKAFEVFALTSSSFRSSNRGLLEACWMNATDQDD
WVKLSEASMSEGWSDEVIEESLQATVLFKASRLCYSPDAVVYDGTFEDVLPVKKEDVHLR
GLESKCLSVEEVLMQHEDFPDAGKLMMTAVIRGKEPIFTATEPVEMDS

Transcript Sequence

Transcript ID

Zm00001d048023_T012
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:148210886:148224607:-1 gene:Zm00001d048023 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP133
Sequence

GGACCAGATCCAACCAGTGCACGTAGCAGATTTTCCCAGAGTTGTTCGGAATGCCCAAGC
CAGCCTGAAGAATTTCTCTGGCAAGAACATGCTTGCTGGTGGCATTGATAAAGAAACATC
CCTTGCGTGGATGATATGCGGAAATGAGCTTTTTATATGGAACTACTTAGTTTCTGTTGC
AAAAGACTGTATTGTACTTGACATTCCATCTTCTCTCATCGGATACAATGATGTGAAACC
CCTCCTCAGTATTCAGTGGACAGTTTGTATAATGAGATGGCACAATAGTGGTGCATCAAC
AAGGAACAGTGGAGAGATGTTACATAGAAAAAGTTCAACTGGCGTGATTCTCTGCAACAA
AAGAACACAAGCTGTTGCTTATTGGCCTGATATCAGTGCTGAATCTAGTAGGAGCCCAGT
TCTTAGTTCATCAGACCATGGTGAGGTGTCCACATGTGGTGCTGCATCTGATTTTCTGAG
GTTTAATTCGCTTATTGCGGCTGCAGTTCCAGGATGTATTCACGAGTGCATTGCAATAGC
TTCTGAGCCTGCAGGTGCTTTGTGGCTGTTCCAGTGTTCACCGGAAGGAATTCGTCAAAG
AAAAGTTCATGCAGATACATTAGGAGATGGTGGGTCTGATCTTTATCAGAAATGTGATGG
TGGAAGGTCCTTGGTTTGGTTACCAAGTAATGTCTCATCTGAGGGTTCTGACCGGAAGTT
CTTTTTATTGACAAATAATGAGGTGCAATGTTGGAGCATCTCACTCTTGCATGACATCAA
TGTAAAAAAGTTAGGGTCTCACGAAATTGTTGGTACTGACGGAGATGTGGGCATTAAGAA
AGATATAGCTGGACAGAAAAACATATGGCTTTTGGACATGCAGATAGATGAGCATGGGAA
GGAATTTAGCATTCTTGTTGCTACATTATGCAAAGATAGGGTTAGTGGGTCAAACTACAC
TCAATATTCTCTTCTAACAATGATGTACAAACCTAACCAGAAGTTTTCATCTGAAGATAA
TGTAGCTAAAGTTGAAAGGTTTTTGGAGAAAAAAGCTCCCTCTCAGGTGATAATTCCTAA
GGCTAGGGTAGAGGATGATAAATTCTTGTTCTCCATGAGGCTAAAAACTGGTGGTAAGCC
CTCTGGTTCTGTTATAATCCTGTCAGGTGATGGAACAGCAACAGTGGCCATGTATTGGAG
AGGTTCCACCCGACTTTATCAGTTTGATCTGCCTTGGGATGCTGGAAAGGTCCTAGATGC
TTCCATTATCCCATCAGCTGAGGACAGAGATGAAGGTGCTTGGGTTGTTCTAACACAAAA
GGCAGGAATCTGGGCGATTCCTGAAAAAGCTGTATTAGTTGGTGGGGTAGAACCACCAGA
GCGCAGCTTGTCACGAAAGGGTAGTTGTAATGGAACAATTGCTGAGGAGAAAAGAAGTCA
GGTCTTCAGTGCTAGTGTTGTTCCCAGGAGAGCTAGCTCTGAGGCTTGGAGTGCTGGAGA
GAGGCAAAGGCCTGCATCAACTGGCATAGCTCAGCAGTCTGCGGTCGATGAAGAGTCCGA
AATGCTATTGAACCAGTTATTTCATGATTTTATGATCTCCACTGCAGTTAATGAGGCATT
TCAAAAGCTTAAAGCAGCAGGAGCATTTGAGAAAGAGGGCGAGATGAACATATTTGTTCG
GATGAGCAAATCCATTGTAAACACATTAGCTAAACACTGGACAACAACAAGAGAAGCTGA
ATTTCTTGCCTCAACAATTGTTTCATCCCTTGTTGAGAAGCAGCAAAAACACGAGAAATT
CCTTCAGTTTCTTGTCTTATCAAAGTGTCATGAAGAACTCGCTTCAAAGCAAAGAGCAGC
AATGCTAACTGTCATGGAGCATGGTGAAAAGCTCTCTGGAATGGCACACCTTAGGGAGTT
ACAAAACACACTTATTCAGCATGGCTCAAGCACCCATTTTTCACCTCAGTCGAAAACCCA
AGGTACTGGTGCCCTTTGGAACCTTATTCAGTTGGTTGGTGAGAAAGCTCGAAGAAACAT
GGTTCTTTTAATGGATCGTGATAATGCTGAAGTGTTCTACAGTAGGGTTTCTGATATAGA
GGATCTATTTTATTGTTTATCTCATGAACTTCAATACATCATTAGTAGAGAAGAACACCC
TTCTGTTCAGATGCAACGTGCACTTGAGTTAGCAAATGCTTGTATCACCATAGTTCAGGC
AGCATCACACTACAAGAAGGATCACAAGGAATGGTATCCATCTCCTGAAGGACTGATAAC
ATGGAACAGCCAACCTGTTCTACGGTCTGGAATCTGGAATTTGGCATCCTTGATTATGGA
GCTTTTGGGAGAATCAGGAGCTGCAGACATGTCAATGAAATCCAGTCTATGGTCTCAGCT
GGAAGGACTTACAGATATTCTACTGGAGGCATATATGTGCCTTTTAACTGCCCAATTTGA
ACGTGGGCAGGAACATGGTGTGCTAGTGCAAGAATATTGTGAACGAAGAGATGAACTTCT
CAGATCCCTCTACAACCTTGCTAAACAAATAGTGGAGGCCAAATACCAGGAGTCAAGAAA
TGGTGCGGACAAGCCAGATCTGAAGGAATCTATACTTAGAGAGGTTATTTCTCCTATTTT
AGCGACAGCCAAACGACATGAAGGGTACCAAACACTGTGGCAGATTTGCTATGATCTAGA
TGATTCAGGTCTCCTCCGCAGCCTAATGCATGATAGCGTAGGGCCTCATGGGGGATTCAG
TTTCTTTGTCTTTAAGGAGTTAGTCAACAGAGGAGACTACTCTAATCTGTTAAGGCTAGG
TGAAGAATTCCAGGAAGAGCTTGCAAGCTTTCTGAAAGAGCGGAGTGATCTGCTGTGGGT
TCATGAGATATGCTTAAACCAGTTCTCATCTGCTTCCGACACCCTTCATACCTATGCTCT
GCGTCGTAGTCCTGATGGAGATGCCAGCTTCACAACCAGCAGAAAGCCACTATCCTTTGC
TGAAAGAAGACGTCTTCTTTATCTCTCTAAAATTGCTGCAACAGCAGGTAAGGACATTGA
TTATGAAGTGAAGGTTGCACGGATAGAAGCGGACATTCGGATTCTAAAACTGCAGGAAGA
AATTGTTCAGCATGATCCAGAATATGCACAAGTCAAATCTACAAACACATTGCTTGGTCC
ATCAGAACTGATTGAGATGTGCTTGAGGAGAGACCGAGAGCTCTCCCTTAAAGCCTTTGA
AGTATTTGCTTTGACAAGCTCATCGTTCCGAAGTTCCAACAGAGGCCTTCTAGAGGCATG
CTGGATGAATGCAACTGACCAAGATGATTGGGTAAAGCTTTCAGAGGCATCCATGTCAGA
AGGTTGGAGTGACGAGGTCATCGAAGAATCTCTTCAAGCAACTGTCCTCTTCAAAGCTTC
CAGGTTGTGTTACAGCCCGGATGCTGTGGTGTATGACGGCACCTTTGAGGATGTTCTGCC
TGTGAAGAAAGAGGATGTACATCTGAGAGGTTTGGAGAGTAAATGTTTGTCAGTTGAAGA
AGTGTTGATGCAGCACGAGGATTTTCCAGATGCTGGTAAATTGATGATGACTGCAGTGAT
TAGGGGCAAGGAACCAATTTTTACAGCCACAGAACCCGTGGAGATGGACTCATGAATACC
CGTTTTAGATTTCTATATGATAGACTGCCACCATATCGCAGTCATTTCATTGTAATTCAT
CCATCGGGTAGTTTCATCATCGTAAAAATCTTGTCTTAGCGACAAGGGGTCTGTACTCTG
TAGTTTTGGTTGTTTCTGTTCTGCGCAGTCACAGAAACTTGATTCCGTAGCACA