Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d048021_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:148185906:148187354:-1 gene:Zm00001d048021 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:allene oxide synthase1 description: allene oxide synthase1
Sequence

ATGGCGAGCTCCGACCATGGTTCCACCACCGCCCCCAAGGACGTGCCGGGCAGCTACGGC
CTGCCGCTGGTGGGCGCCGTGCGCGACCGCCTCGACTTCTACTACTTCCAGGGGCAGGAC
AAGTACTTCGAGTCCCGCGTGGAGCGCTACGGCTCCACCGTGGTGCGCATGAACGTGCCG
CCGGGCCCCTTCATGGCGCGCGACCCGCGGGTGGTGGCGGTCCTGGACGCCAAGAGCTTC
CCCGTGCTCTTCGACATGGACAAGGTGGAGAAGAAGGACCTGTTCACGGGCACCTACATG
CCGTCCACCTCCCTCACCGGCGGCTACCGCGTCTGCTCGTACCTGGACCCCTCCGAGCCC
ACCCACACCAAGGTGAAGCAGCTGCTCTTCTCCCTCCTGCTCTCCCGCAAGGACGACGTG
ATCCCCACCTTCCGCTCCAACTTCTCCTCGCTCCTCGCCACCGTGGAGGCGGAGCTGGCC
AAGGGCGGCAAGGCCGAGTTCAACAAGCTCAACGACGTGACCTCCTTCGACTTCATCGGC
GAGGCCTACTTCGGCGTGCGCCCCTCGGCGACCGAGCTCGGCAAGGGCGGGCCGAGCAAG
GCGGCCAAGTGGCTCATCTGGCAGCTCCACCCGCTGGTCACGCTCGGCCTCCCCATGGTC
CTGGAGGAGCCGCTGCTCCACACGTTCCACCTCCCGCCTTTCCTCGTCAAGGGCGACTAC
AGGGCGCTGTACAAGTACTTCTCCACGGTGGCGAAGCAGGCGCTGGACACCGCCGAGGGC
CTGGGCCTGTCGCGCGAGGAGGCCTGCCACAACCTCCTCTTCGCCACCACCTTCAACAGC
TACGGCGGCCTCAAGGTGCTGTTCCCGGGCCTGCTGGCCAACGTGGCCAGCGGCGGCGAG
AAGCTCCACGAGCGGCTGGTGGCCGAGATCCGCGGCGCCGTGGCCGACGCCGGCGGCAAG
GTCACCCTCGCGGCGGTGGAGAGGATGGAGCTGGCCAAGTCGGTGGTGTGGGAGTCGCTG
CGCCTGGACCCGCCCGTCAAGTTCCAGTACGGGCACGCCAAGAAGGACCTGCTGGTGGAG
AGCCACGACGCGGTGTTCCAGGTGAGGAAAGGCGAGATGCTGTTCGGCTACCAGCCGTGC
GCCACCAAGGACCCCCGCGTGTTCGGCGACACGGCCGGGGACTTCGTGCCCGACCGCTTC
CTCGGCGAGGAGGGCAGCAAGCTGCTGCAGTACGTGTACTGGTCCAACGGCCGCGAGACC
GACAACCCCAGCGTCGACAACAAGCAGTGCCCCGGGAAGAACTTCGTGGTGCTCGTCGGC
AGGCTCCTCCTCGTCGAGCTCTTCCTCCGCTACGACACATTCACCGCCGAGGTCGGCAAG
GAGCTGCTCGGCACCAGCGTCATCTTCACCGGTGTCACGAAAGCTACCTCCGGTCCGGGC
AGCGAGTAA

Peptide Sequence

PEP ID

Zm00001d048021_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:148185906:148187354:-1 gene:Zm00001d048021 transcript:Zm00001d048021_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:allene oxide synthase1 description: allene oxide synthase1
Sequence

MASSDHGSTTAPKDVPGSYGLPLVGAVRDRLDFYYFQGQDKYFESRVERYGSTVVRMNVP
PGPFMARDPRVVAVLDAKSFPVLFDMDKVEKKDLFTGTYMPSTSLTGGYRVCSYLDPSEP
THTKVKQLLFSLLLSRKDDVIPTFRSNFSSLLATVEAELAKGGKAEFNKLNDVTSFDFIG
EAYFGVRPSATELGKGGPSKAAKWLIWQLHPLVTLGLPMVLEEPLLHTFHLPPFLVKGDY
RALYKYFSTVAKQALDTAEGLGLSREEACHNLLFATTFNSYGGLKVLFPGLLANVASGGE
KLHERLVAEIRGAVADAGGKVTLAAVERMELAKSVVWESLRLDPPVKFQYGHAKKDLLVE
SHDAVFQVRKGEMLFGYQPCATKDPRVFGDTAGDFVPDRFLGEEGSKLLQYVYWSNGRET
DNPSVDNKQCPGKNFVVLVGRLLLVELFLRYDTFTAEVGKELLGTSVIFTGVTKATSGPG
SE

Transcript Sequence

Transcript ID

Zm00001d048021_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:148185906:148187354:-1 gene:Zm00001d048021 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:allene oxide synthase1 description: allene oxide synthase1
Sequence

ATGGCGAGCTCCGACCATGGTTCCACCACCGCCCCCAAGGACGTGCCGGGCAGCTACGGC
CTGCCGCTGGTGGGCGCCGTGCGCGACCGCCTCGACTTCTACTACTTCCAGGGGCAGGAC
AAGTACTTCGAGTCCCGCGTGGAGCGCTACGGCTCCACCGTGGTGCGCATGAACGTGCCG
CCGGGCCCCTTCATGGCGCGCGACCCGCGGGTGGTGGCGGTCCTGGACGCCAAGAGCTTC
CCCGTGCTCTTCGACATGGACAAGGTGGAGAAGAAGGACCTGTTCACGGGCACCTACATG
CCGTCCACCTCCCTCACCGGCGGCTACCGCGTCTGCTCGTACCTGGACCCCTCCGAGCCC
ACCCACACCAAGGTGAAGCAGCTGCTCTTCTCCCTCCTGCTCTCCCGCAAGGACGACGTG
ATCCCCACCTTCCGCTCCAACTTCTCCTCGCTCCTCGCCACCGTGGAGGCGGAGCTGGCC
AAGGGCGGCAAGGCCGAGTTCAACAAGCTCAACGACGTGACCTCCTTCGACTTCATCGGC
GAGGCCTACTTCGGCGTGCGCCCCTCGGCGACCGAGCTCGGCAAGGGCGGGCCGAGCAAG
GCGGCCAAGTGGCTCATCTGGCAGCTCCACCCGCTGGTCACGCTCGGCCTCCCCATGGTC
CTGGAGGAGCCGCTGCTCCACACGTTCCACCTCCCGCCTTTCCTCGTCAAGGGCGACTAC
AGGGCGCTGTACAAGTACTTCTCCACGGTGGCGAAGCAGGCGCTGGACACCGCCGAGGGC
CTGGGCCTGTCGCGCGAGGAGGCCTGCCACAACCTCCTCTTCGCCACCACCTTCAACAGC
TACGGCGGCCTCAAGGTGCTGTTCCCGGGCCTGCTGGCCAACGTGGCCAGCGGCGGCGAG
AAGCTCCACGAGCGGCTGGTGGCCGAGATCCGCGGCGCCGTGGCCGACGCCGGCGGCAAG
GTCACCCTCGCGGCGGTGGAGAGGATGGAGCTGGCCAAGTCGGTGGTGTGGGAGTCGCTG
CGCCTGGACCCGCCCGTCAAGTTCCAGTACGGGCACGCCAAGAAGGACCTGCTGGTGGAG
AGCCACGACGCGGTGTTCCAGGTGAGGAAAGGCGAGATGCTGTTCGGCTACCAGCCGTGC
GCCACCAAGGACCCCCGCGTGTTCGGCGACACGGCCGGGGACTTCGTGCCCGACCGCTTC
CTCGGCGAGGAGGGCAGCAAGCTGCTGCAGTACGTGTACTGGTCCAACGGCCGCGAGACC
GACAACCCCAGCGTCGACAACAAGCAGTGCCCCGGGAAGAACTTCGTGGTGCTCGTCGGC
AGGCTCCTCCTCGTCGAGCTCTTCCTCCGCTACGACACATTCACCGCCGAGGTCGGCAAG
GAGCTGCTCGGCACCAGCGTCATCTTCACCGGTGTCACGAAAGCTACCTCCGGTCCGGGC
AGCGAGTAA