Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047992_T006
CDS Infomation

cds chromosome:B73_RefGen_v4:9:147411759:147414586:1 gene:Zm00001d047992 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-3 complex subunit sigma
Sequence

ATGATCCAGGCGGTGATGGTGATCAGCACCCAGGCCAAGCCCCGCCTTCTCAAGTTCTAC
AGTTTCCAGGTTCCAAACCCTCTCCTCTCTTCTCTACAGCCACCCGAGAAGCATCAGGAC
CTCGTCCGCTGTGTCTTCCAATTACTCTCTGCAAGGCCCGAGAGCGCGAGCAATTTTGTC
AAGGTGGACTCCATCTTTGGCCCGGGAACAAAAATGGTCTACAAGCATTTGGCCACACTA
TACTTTGTTTTTGTCTTTGATAGCTCTGAGAACGAGCTTGCCATGCTCGACCTCGTACAA
GTGTTTGTTGAAACATTGGACAGATGCTTCAAGAATGTATGCGAGCTTGACATCGTATTT
AACTTCAACAAGCTGCACACCATTTTGGATGAGATGATATCGGGGGGACAGGTGATCGAA
ACAAGTTCAGAACAGATAATGAAATCTGTGGAAGAGATTGAAAGGCTGGAGAAACAATCG
AGCACAACCAGCTTCATACCCAAGTCGATTACAGAGCGTTTTACCCGTTGA

Peptide Sequence

PEP ID

Zm00001d047992_P006
PEP Infomation

pep chromosome:B73_RefGen_v4:9:147411759:147414586:1 gene:Zm00001d047992 transcript:Zm00001d047992_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-3 complex subunit sigma
Sequence

MIQAVMVISTQAKPRLLKFYSFQVPNPLLSSLQPPEKHQDLVRCVFQLLSARPESASNFV
KVDSIFGPGTKMVYKHLATLYFVFVFDSSENELAMLDLVQVFVETLDRCFKNVCELDIVF
NFNKLHTILDEMISGGQVIETSSEQIMKSVEEIERLEKQSSTTSFIPKSITERFTR

Transcript Sequence

Transcript ID

Zm00001d047992_T006
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:147411759:147414586:1 gene:Zm00001d047992 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-3 complex subunit sigma
Sequence

ATGATCCAGGCGGTGATGGTGATCAGCACCCAGGCCAAGCCCCGCCTTCTCAAGTTCTAC
AGTTTCCAGGTTCCAAACCCTCTCCTCTCTTCTCTACAGCCACCCGAGAAGCATCAGGAC
CTCGTCCGCTGTGTCTTCCAATTACTCTCTGCAAGGCCCGAGAGCGCGAGCAATTTTGTC
AAGGTGGACTCCATCTTTGGCCCGGGAACAAAAATGGTCTACAAGCATTTGGCCACACTA
TACTTTGTTTTTGTCTTTGATAGCTCTGAGAACGAGCTTGCCATGCTCGACCTCGTACAA
GTGTTTGTTGAAACATTGGACAGATGCTTCAAGAATGTATGCGAGCTTGACATCGTATTT
AACTTCAACAAGCTGCACACCATTTTGGATGAGATGATATCGGGGGGACAGGTGATCGAA
ACAAGTTCAGAACAGATAATGAAATCTGTGGAAGAGATTGAAAGGCTGGAGAAACAATCG
AGCACAACCAGCTTCATACCCAAGTCGATTACAGAGCGTTTTACCCGTTGAGCTTCCACT
CGTTTCCAGAACAATGTGACATTTAAGGTGTGAACAGAACTGAGATATACTATTCAGTCT
CATTTTAGTTCTCCGATAAGACCTTGTATGCCCCCGCCCCCCGGCTGTATTCTGTAAGCC
TGTAACCTGGATATGAATGCGGCATCTGCAGTCCAATAATACTGCCTGCGTTATATGCTT
GATCGTCTGACAGTGCTCGCTAAGGTTTAGACATGCCCCAGTAACAAATTAGCAATATTC
TTATCCTGAGAACTAGTGTATCCATGGTGTCCGAGAAAGAACTAGTGTATCCATGGTGAC
CAGAATAGAACTCTTCGGAATTAACT