Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047986_T046
CDS Infomation	cds chromosome:B73_RefGen_v4:9:147260833:147267315:1 gene:Zm00001d047986 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_7.assembly12x (Fragment)
Sequence	ATGCAAAGGGAACCTCGCTGCACCAGTTGGTTTTGTGTTGCAGATACTGCTTTTAAGTGT GAGGTGTTTGAGGATGCTGTCGTAATTGATTGGCACCAGTGCTTATCAGAGCCAGATGAA TCTTATGACCACTTTGAATGGGCTATTGGGACAGATGAAGGAGAATCCGATATTTTTGGC TTTGAAAATGTTGGAATGAATGCACAAGTCCACAGAAATGGAATCGATCTTGATCAGTTT GAGGACTACTTCATAACGTTGCGAGCTTGGAGGCTTGATGGCCAGTGCACAGAGCTGTGT GTAAAAGCACATGCATTGAAGGGTCAATCATGTGCTCACCACAGGCTAGTGGTGGGTGAT GGCTTTGTGACTATGACAAAGGGTGAAAGTATTAGAAATTTCTTTGAGCATGCTGAAGAG GCCGAGGAAGAGGATGAAGACGATGCCATGGACAGGGATGGAAATGATTTTGATGGTGAT GATGCCCATTCACAGAAGCATGCCAAGAGCCCTGAACTGGCAAGAGAATTTCTTTTGGAT GCTGCTGCTGTGATATTCAAAGAACAGATTGAGAAGGCCTTCAGGGAAGGTACAGCACAG CAAAATGCACGTAGTGTTTTTGTGACCCTTGCTTTAAAACTTTTGGAACAGCGAGTTCAT GTAGCATGCAAAGAAATAATTACGTTGGAAAAACAGAACAAACTTCTTGAAGAAGAGGAG AAAGAAAAGCGTGAAGAACATGAGCGCGGGATGAAGAGGAGAACAAGAGAGAGAGAAAAG AAGAACAGAAGAAAAGAAAGGCTGAAAGAAAAGGATCATAGTAAAGGAAAAAGACTAGTT GAATCAAAGTCACCAGACAATATTTCATCTTCAGCTCCAAGCAACTCCACAGCATCTATC AATGATTATTCGACAAATACTCTGGACTCAAGAGATTCAGGTACGGAAGAGGAATATAGT GCTGAAGGTGTGAATCTGTGCACTCCTGACAGCTGTGTGAATCAATCTTCATGTAAAAAA ATTAATGGAGAAAACAGTGTCCACTGCAATGCAGTGACAGAATTTTCTCCAATGGACAAC AGTGACATTTCTACATCAGATCAACCCAAGTCTTTGAGACGAAGTCCAAGATCAAGAGAT TATTTTCCTCAAGATCAGTCATGTTGGTATGATGACTGCGGAGATGAGTCTGGAAGAATT GGTGAATTACGATGGAAGTCAAGGGAAAAGACAAGAGGTACTGATAGAAGTTGCAACACA GCATCCACCTCAAATAACAAGACAAGAGAGAGGCACTCATACAATTTTTGCAGCTGTGGC CATCCAGAAGACTATGGAGTTATGGACAGCTGTTTCTTGCCAACAGTTAGATCTGTCAGA GAGATGAAGATAGCAAGAAAATCAGGAGTTGAGAAACCTAAGGTGCAGTACAACAGATGC TATACATTGGATAGCTTTATAGTGCCAAAAGGAAACCATGCTGGTTGTACACAGAAAAAT GCTATCCCAAAGCAAGTATGGGAGCCTATGGATGCTCGAAGGAAGACTAACTTACACAAC ACAGTTCATGATTCAGGTTCAATTAACGATGTTGATCCACTGAAACATGTGGTTTTTGAT AACAGCGGATCTCATAAGTTCAGTGTAAGATGTGAATCACAGCCTCAGGCTTCTGAAAGT TCCAGGGATGTTTGTAATTCAGATCAAAGATGTGCAAATGGTGGGAGAAATCAAACTACT TCCTGTGCTAGTACTCTTATGGTAAATAAACAAAATTGTTACTCAGAAAATGATGAAGGC TCCAGGCATGATGTAGAGCTGATGACGAACTCTGCTAGTTCTGATAGCACCTCGTCATGC ATGAGCCAGGGAGATAGGGAAAGCAGCTCCAGCAGTACAACCTCTTCGAGCGCTCAAAAT CCGGAATCATCTTCTGAATCTGAGGAATCACCGGAGAGAATAAACAGCACAGTAGGTACA CCATCATCAAGAGCTGCTTCACGGTCTTTGCTTGAAGCATGTGCAGGAAATGGTTTCAGA GAATACCAACCCAAGACAACCCGCCCAGCTCACAATGACATGTTTGGGTACAATGTATCC CCTGTCCAAGACCAGCTGCTGCATTACCAAATCACGCATCCACCTCAACAACCGCCAATA ACAATGGGATTTCATGACCGTTCTTGGGCTGCACCAACGAATGGAAACTTTCAGTATGCT CGACCATCCCACTTATATTCTAGTCCGCTCGTATTCGGAGTACCTGGAAATCATTTTATT GATTATCCTTACATGGCTCCTGCCTTCAGCCATATACCTCCAGAGCCTATTCACAAGGCC GCAGGCAGCTTTAGAGCCGTGCCTCTGTCACTGCCTTTTCAAAACGGACATCGGCAGGTT GCTGAGCATACTCAGAGAGACATGAATCTAGAGAGGCACCCTTCGAAGTTGACTATGCTG ACAGGCAAGGATCCCCCAGAAGACAAGAACAAGTCGGGACTAAAGTATCTCCCAGAAGAC AAGAACAAATCATGGGAGGCGGATGCATCCTTCTCGTTGTTCCAATTCAACTTGCCAATA GCTTCGCCTGTAACACCATCATCGAAAGATAAGAGCGGAAAGTTGGCTGCAAGGACGCCA CTGGTTGAGGTTCAACCTCAGCTTTGCTTGAGGGAACAGGCAGATGTGAAGCAGTATAAC CTCTTCTCCTCGAAAGATAATGGTATATTTTCGTTTATGTAG

Peptide Sequence

PEP ID	Zm00001d047986_P046
PEP Infomation	pep chromosome:B73_RefGen_v4:9:147260833:147267315:1 gene:Zm00001d047986 transcript:Zm00001d047986_T046 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_7.assembly12x (Fragment)
Sequence	MQREPRCTSWFCVADTAFKCEVFEDAVVIDWHQCLSEPDESYDHFEWAIGTDEGESDIFG FENVGMNAQVHRNGIDLDQFEDYFITLRAWRLDGQCTELCVKAHALKGQSCAHHRLVVGD GFVTMTKGESIRNFFEHAEEAEEEDEDDAMDRDGNDFDGDDAHSQKHAKSPELAREFLLD AAAVIFKEQIEKAFREGTAQQNARSVFVTLALKLLEQRVHVACKEIITLEKQNKLLEEEE KEKREEHERGMKRRTREREKKNRRKERLKEKDHSKGKRLVESKSPDNISSSAPSNSTASI NDYSTNTLDSRDSGTEEEYSAEGVNLCTPDSCVNQSSCKKINGENSVHCNAVTEFSPMDN SDISTSDQPKSLRRSPRSRDYFPQDQSCWYDDCGDESGRIGELRWKSREKTRGTDRSCNT ASTSNNKTRERHSYNFCSCGHPEDYGVMDSCFLPTVRSVREMKIARKSGVEKPKVQYNRC YTLDSFIVPKGNHAGCTQKNAIPKQVWEPMDARRKTNLHNTVHDSGSINDVDPLKHVVFD NSGSHKFSVRCESQPQASESSRDVCNSDQRCANGGRNQTTSCASTLMVNKQNCYSENDEG SRHDVELMTNSASSDSTSSCMSQGDRESSSSSTTSSSAQNPESSSESEESPERINSTVGT PSSRAASRSLLEACAGNGFREYQPKTTRPAHNDMFGYNVSPVQDQLLHYQITHPPQQPPI TMGFHDRSWAAPTNGNFQYARPSHLYSSPLVFGVPGNHFIDYPYMAPAFSHIPPEPIHKA AGSFRAVPLSLPFQNGHRQVAEHTQRDMNLERHPSKLTMLTGKDPPEDKNKSGLKYLPED KNKSWEADASFSLFQFNLPIASPVTPSSKDKSGKLAARTPLVEVQPQLCLREQADVKQYN LFSSKDNGIFSFM

Transcript Sequence

Transcript ID	Zm00001d047986_T046
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:147260833:147267315:1 gene:Zm00001d047986 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_7.assembly12x (Fragment)
Sequence	GACCCCGTCGCTGCAGTATCCTCCGAGGGTCGTTGGCGGGGGAGTCGTCGTCGTCGTATT TGGCTGCCGGAATTCGATGCGCCACGGAGCGGGCGAGAGGACCTAGTTGAGTTGAATACG GCAGCGACGGGAGGACGTGATGCCGGGGGTGGCGTCCGCAGCGGGATCGGGGATCTGGTC GCGCCGGCGGGACGAGATCACGTTCGATCGCCTTCAGAAGTTCTGGAATGACTTGCTTCC TCAAGCACGGCAGGAACTCCTCAAATTAGATAAGCAAACTCTCATTGAACAAGCACGCAA GAATTTCTACTGCTCAAGGTGCAATGGGTTGCTTCTGGAAAGTTTTGCACAAATTGTTAT CTATGGGAAGTCACTGCAGCAAGAAGCTTCAGATATTGGTCATCTGAGGACAGCTATTGA ATTAAGAATTACACATGGAGAGCAAGATGGCGCTCAGGACCCATCAATCCATCCCTGGGG AGGCCTTTCAACCACAAAAGATGGCTTCCTTACGCTTCTTGACTGCTTTATAAAAGCAAA ATCATTACGGGTGCTTCAGAATGTAAGTGTGCAGTAACTTGGGTTTCTTATTTTCTGTCT GTGCTCTATTGGTGACTACATGATTAAGAAATAATTTTCTATTTTGTATATTGGGTCCTT TGTGTTACTTTATTTGAAGCAATCATTTTAGTTCTAGGTTGGTCGTTTAACCCTCTAGTA GCCTAATGCAGTTTGGCCTTGGAAATTTAATCAGGTCTTTGACAATGCACGGGCAAGAGA AAGGGAACGGGAAATGCTTTATCCTGATGCCTGTGGTGCAGGTGGCAGAGGATGGATCAG CCAAGGGATGGCTAACTATAGGGGTCATGGAATAAGAGAAATGTGTGCTCTACACACTGC CCACCTTTCATGTACTACACTGGTGGATTTCTGGTCAGCGCTTGGTGAAGGAACTAGATC ATCTCTTCTGCGGATGAAGGAGGAAGATTTCATTGAAAAACTTATGTACAGGTGAGCATA GGCATTTAGATTACCAACAAAAGTAACAAAGTTAACTAGTGAGTTTATAACAATCTGAAG TTTTGTGTCCAACACAATGCAATGCAATCCTTCCTTAGAAGGAACCTTGCAAGTACTTGT AAGGTGCTGTGATCGGAAGTGCTACTGTGCTACTTCCTGCTGCTGCTTTGCAGCTTCCAG ATTTTCTTGCTATCGGTGCTGGCTGGCTGGTGTTTTTGCAGCTGCAGCCGCAATCTCAAC TGATCAGAGTATTGAATGCTTCAATAGTACATAGGGTAATAACCTGATGATTTTTGTGAT ATTACTGATTAGTTCTGTCTTGTTCTGTTGGATGTTCAAGTAACTTTTTTTCCTACTAGT CCTAGTCTGCTATCTGCAGGGATTTCTCTAGTAACAATCTATCAGGTTAAAATTCGAACA GTTTGGTGGAAATTTCTGAACAGGTTTGATAGTAAGAGATTTTGCCGAGAGTGTCGAAGG AATGTTATCCGTGAATTCAAGGATCTGAAGGAACTGAAGCGCATGCAAAGGGAACCTCGC TGCACCAGTTGGTTTTGTGTTGCAGATACTGCTTTTAAGTGTGAGGTGTTTGAGGATGCT GTCGTAATTGATTGGCACCAGTGCTTATCAGAGCCAGATGAATCTTATGACCACTTTGAA TGGGCTATTGGGACAGATGAAGGAGAATCCGATATTTTTGGCTTTGAAAATGTTGGAATG AATGCACAAGTCCACAGAAATGGAATCGATCTTGATCAGTTTGAGGACTACTTCATAACG TTGCGAGCTTGGAGGCTTGATGGCCAGTGCACAGAGCTGTGTGTAAAAGCACATGCATTG AAGGGTCAATCATGTGCTCACCACAGGCTAGTGGTGGGTGATGGCTTTGTGACTATGACA AAGGGTGAAAGTATTAGAAATTTCTTTGAGCATGCTGAAGAGGCCGAGGAAGAGGATGAA GACGATGCCATGGACAGGGATGGAAATGATTTTGATGGTGATGATGCCCATTCACAGAAG CATGCCAAGAGCCCTGAACTGGCAAGAGAATTTCTTTTGGATGCTGCTGCTGTGATATTC AAAGAACAGATTGAGAAGGCCTTCAGGGAAGGTACAGCACAGCAAAATGCACGTAGTGTT TTTGTGACCCTTGCTTTAAAACTTTTGGAACAGCGAGTTCATGTAGCATGCAAAGAAATA ATTACGTTGGAAAAACAGAACAAACTTCTTGAAGAAGAGGAGAAAGAAAAGCGTGAAGAA CATGAGCGCGGGATGAAGAGGAGAACAAGAGAGAGAGAAAAGAAGAACAGAAGAAAAGAA AGGCTGAAAGAAAAGGATCATAGTAAAGGAAAAAGACTAGTTGAATCAAAGTCACCAGAC AATATTTCATCTTCAGCTCCAAGCAACTCCACAGCATCTATCAATGATTATTCGACAAAT ACTCTGGACTCAAGAGATTCAGGTACGGAAGAGGAATATAGTGCTGAAGGTGTGAATCTG TGCACTCCTGACAGCTGTGTGAATCAATCTTCATGTAAAAAAATTAATGGAGAAAACAGT GTCCACTGCAATGCAGTGACAGAATTTTCTCCAATGGACAACAGTGACATTTCTACATCA GATCAACCCAAGTCTTTGAGACGAAGTCCAAGATCAAGAGATTATTTTCCTCAAGATCAG TCATGTTGGTATGATGACTGCGGAGATGAGTCTGGAAGAATTGGTGAATTACGATGGAAG TCAAGGGAAAAGACAAGAGGTACTGATAGAAGTTGCAACACAGCATCCACCTCAAATAAC AAGACAAGAGAGAGGCACTCATACAATTTTTGCAGCTGTGGCCATCCAGAAGACTATGGA GTTATGGACAGCTGTTTCTTGCCAACAGTTAGATCTGTCAGAGAGATGAAGATAGCAAGA AAATCAGGAGTTGAGAAACCTAAGGTGCAGTACAACAGATGCTATACATTGGATAGCTTT ATAGTGCCAAAAGGAAACCATGCTGGTTGTACACAGAAAAATGCTATCCCAAAGCAAGTA TGGGAGCCTATGGATGCTCGAAGGAAGACTAACTTACACAACACAGTTCATGATTCAGGT TCAATTAACGATGTTGATCCACTGAAACATGTGGTTTTTGATAACAGCGGATCTCATAAG TTCAGTGTAAGATGTGAATCACAGCCTCAGGCTTCTGAAAGTTCCAGGGATGTTTGTAAT TCAGATCAAAGATGTGCAAATGGTGGGAGAAATCAAACTACTTCCTGTGCTAGTACTCTT ATGGTAAATAAACAAAATTGTTACTCAGAAAATGATGAAGGCTCCAGGCATGATGTAGAG CTGATGACGAACTCTGCTAGTTCTGATAGCACCTCGTCATGCATGAGCCAGGGAGATAGG GAAAGCAGCTCCAGCAGTACAACCTCTTCGAGCGCTCAAAATCCGGAATCATCTTCTGAA TCTGAGGAATCACCGGAGAGAATAAACAGCACAGTAGGTACACCATCATCAAGAGCTGCT TCACGGTCTTTGCTTGAAGCATGTGCAGGAAATGGTTTCAGAGAATACCAACCCAAGACA ACCCGCCCAGCTCACAATGACATGTTTGGGTACAATGTATCCCCTGTCCAAGACCAGCTG CTGCATTACCAAATCACGCATCCACCTCAACAACCGCCAATAACAATGGGATTTCATGAC CGTTCTTGGGCTGCACCAACGAATGGAAACTTTCAGTATGCTCGACCATCCCACTTATAT TCTAGTCCGCTCGTATTCGGAGTACCTGGAAATCATTTTATTGATTATCCTTACATGGCT CCTGCCTTCAGCCATATACCTCCAGAGCCTATTCACAAGGCCGCAGGCAGCTTTAGAGCC GTGCCTCTGTCACTGCCTTTTCAAAACGGACATCGGCAGGTTGCTGAGCATACTCAGAGA GACATGAATCTAGAGAGGCACCCTTCGAAGTTGACTATGCTGACAGGCAAGGATCCCCCA GAAGACAAGAACAAGTCGGGACTAAAGTATCTCCCAGAAGACAAGAACAAATCATGGGAG GCGGATGCATCCTTCTCGTTGTTCCAATTCAACTTGCCAATAGCTTCGCCTGTAACACCA TCATCGAAAGATAAGAGCGGAAAGTTGGCTGCAAGGACGCCACTGGTTGAGGTTCAACCT CAGCTTTGCTTGAGGGAACAGGCAGATGTGAAGCAGTATAACCTCTTCTCCTCGAAAGAT AATGGTATATTTTCGTTTATGTAGATAAATTAAAAACTGTGACAAATCTGTTATCCTTCG TTTCTGCTGTCTCTTGCTGCACTTCGTGAATGATTTGTGTTCTCCGGAGAAAAATAAAGG CTGTTGGCATTTTCCT