Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047982_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:147124975:147126882:-1 gene:Zm00001d047982 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGTCGCGAGCCGCTATCCGCATGAAGCCCCCTTCCTTCTCGGTGTCCTTAACCACG GCGTCCCAGCTCCACGACGCCATCGACCGCCTCCTATCGCTCCTACGCGCCGACGCCTCC CACGCCCCCGCCGCTCGCGCGATTGCCGCGGCCGTCGCCTCGCTCCGGCCGCCCTCCACT CTCCTGTCCAACCGCATCCTCCATCTCCTCTCCTCCCACCCGGCCACTCTCCCGGACGCG CTCGCCCTCCTCTCTTCTCTCCCAAGCACCGATGTATGCTCCTACAACACCCTCGTCGCA GCGCTCGGCCGATCCCCACGCGGCCTCGCCTCCGCGCGCGCGCTGTTCGACCGAATGCCT CGGAGGGACCACTTCTCTTGGTCCGCCATCGTCTCCGCCCACGTGCGCCACGGCCAGCCT CGCGCCGCGCTCGCGATCTACCGCCGGATGCTGCGGGAGCCGGGGGGCTCCGGCGCGGAC AACGAGTTCACCGCGTCCAGCGCGCTCGCCGCGGCCACGGCCGCCCGGTGCGCGCGCGCG GGGAGGGAGCTGCACTGCCACGTGGTCAGGCGAGGGATCGACGCGGATGCCGTCGTCTGG AGCGCTCTCGCAGACATGTACGCCAAGTTCGGGCGCCTGGACGACGCGAGGAGCGTGTTC GATAGGATGCCTGTTCGGGACGTCGTGTCTTGGACGGCCATGCTGGACAGGTATTTTGAT GCCGGGCGCGATGGCGAAGGCTTCAGGCTGTTTGTGCGCATGATGAGGAGTGGCATTCTA CCCAATGAGTTCACATACGCCGGGGTACTGCGTGCTTGCGCAGAATTCACCTCCGAGAAG CTCGGGAAGCAGGTGCATGGTCGAATGGCAAAGAGCAGGACAGGGGACTCATGCTTTGCA GGGAGTGCGCTTGTGCACATGTACTCCAAGTACGGGGACATGGGAACTGCAATGCGTGTC TTTAGGGGGATGCCAAAGCCGGACTTGGTGTCGTGGACGGCCATGATCTCTGGCTATGCG CAGAATGGGCAGCCAGATGAGGCATTGCATTGCTTCGACATGTTATTGAGCTCTGGATTC AGGCCTGATCATGTCACCTTCGTTGGCGTTCTATCTGCATGTGCTCATGCTGGCCTGGTC GATAAAGGTCTGGGCATCTTCCATTCGATAAAGGACAAATATGGTATTGAGCACACTGCT GATCATTATGCTTGTGTAATTGATCTCCTCAGCCGGTCAGGCCTGTTTGAGCGAGCAGAA GATATGATCAACACAATGCCTGTAAAGCCTAACAAGTTCCTATGGGCGTCCTTGCTTGGT GGCTGCCGTATTCATAAGAATGTGCGGCTTGCATGGTGGGCAGCAGAAGCACTGTTTGAA ATTGAACCTGAAAATCCAGCAACATATGTTACTCTAGCCAATATTTATGCATCCGTTGGT TTGTTTGATGAAGTTGAGAATATGAGACGGACCATGGAATTAAGGGGCATAACTAAAATG CCAGCCTCAAGTTGGATTGAAGTTGGGACAAGAGTGCATGTGTTTCTGGTTGGGGATAAG TCGCATCCTCAAGCTGAAGAAATATATGCGCTTCTGAAGAAGCTGTATGTGAAAATGAGG GAAGAAGGGTATGTGGCAGACACCGGATTTGTTCTCCATGATGTAGAAGACGAGCAGAAG CAGCAGGACATTGGTTATCACAGCGAGCGGCTTGCTGTTGCATTTGGAATCATTGCCACT CCGAAGGGTTCTCCTATCAAGGTTTTCAAGAATCTGCGCATTTGTGGGGACTGTCATACC ACTATTAAGTTAATATCAAAGATTGTGCAAAGAGAGATCATTGTCAGGGACTCTAATAGG TTCCATCACTTCAAGAACGGGAGTTGTTCTTGCAGGGATTATTGGTGA

Peptide Sequence

PEP ID	Zm00001d047982_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:147124975:147126882:-1 gene:Zm00001d047982 transcript:Zm00001d047982_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MPSRAAIRMKPPSFSVSLTTASQLHDAIDRLLSLLRADASHAPAARAIAAAVASLRPPST LLSNRILHLLSSHPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRMP RRDHFSWSAIVSAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARA GRELHCHVVRRGIDADAVVWSALADMYAKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFD AGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFA GSALVHMYSKYGDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPDEALHCFDMLLSSGF RPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAE DMINTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEPENPATYVTLANIYASVG LFDEVENMRRTMELRGITKMPASSWIEVGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMR EEGYVADTGFVLHDVEDEQKQQDIGYHSERLAVAFGIIATPKGSPIKVFKNLRICGDCHT TIKLISKIVQREIIVRDSNRFHHFKNGSCSCRDYW

Transcript Sequence

Transcript ID	Zm00001d047982_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:147124975:147126882:-1 gene:Zm00001d047982 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCCGTCGCGAGCCGCTATCCGCATGAAGCCCCCTTCCTTCTCGGTGTCCTTAACCACG GCGTCCCAGCTCCACGACGCCATCGACCGCCTCCTATCGCTCCTACGCGCCGACGCCTCC CACGCCCCCGCCGCTCGCGCGATTGCCGCGGCCGTCGCCTCGCTCCGGCCGCCCTCCACT CTCCTGTCCAACCGCATCCTCCATCTCCTCTCCTCCCACCCGGCCACTCTCCCGGACGCG CTCGCCCTCCTCTCTTCTCTCCCAAGCACCGATGTATGCTCCTACAACACCCTCGTCGCA GCGCTCGGCCGATCCCCACGCGGCCTCGCCTCCGCGCGCGCGCTGTTCGACCGAATGCCT CGGAGGGACCACTTCTCTTGGTCCGCCATCGTCTCCGCCCACGTGCGCCACGGCCAGCCT CGCGCCGCGCTCGCGATCTACCGCCGGATGCTGCGGGAGCCGGGGGGCTCCGGCGCGGAC AACGAGTTCACCGCGTCCAGCGCGCTCGCCGCGGCCACGGCCGCCCGGTGCGCGCGCGCG GGGAGGGAGCTGCACTGCCACGTGGTCAGGCGAGGGATCGACGCGGATGCCGTCGTCTGG AGCGCTCTCGCAGACATGTACGCCAAGTTCGGGCGCCTGGACGACGCGAGGAGCGTGTTC GATAGGATGCCTGTTCGGGACGTCGTGTCTTGGACGGCCATGCTGGACAGGTATTTTGAT GCCGGGCGCGATGGCGAAGGCTTCAGGCTGTTTGTGCGCATGATGAGGAGTGGCATTCTA CCCAATGAGTTCACATACGCCGGGGTACTGCGTGCTTGCGCAGAATTCACCTCCGAGAAG CTCGGGAAGCAGGTGCATGGTCGAATGGCAAAGAGCAGGACAGGGGACTCATGCTTTGCA GGGAGTGCGCTTGTGCACATGTACTCCAAGTACGGGGACATGGGAACTGCAATGCGTGTC TTTAGGGGGATGCCAAAGCCGGACTTGGTGTCGTGGACGGCCATGATCTCTGGCTATGCG CAGAATGGGCAGCCAGATGAGGCATTGCATTGCTTCGACATGTTATTGAGCTCTGGATTC AGGCCTGATCATGTCACCTTCGTTGGCGTTCTATCTGCATGTGCTCATGCTGGCCTGGTC GATAAAGGTCTGGGCATCTTCCATTCGATAAAGGACAAATATGGTATTGAGCACACTGCT GATCATTATGCTTGTGTAATTGATCTCCTCAGCCGGTCAGGCCTGTTTGAGCGAGCAGAA GATATGATCAACACAATGCCTGTAAAGCCTAACAAGTTCCTATGGGCGTCCTTGCTTGGT GGCTGCCGTATTCATAAGAATGTGCGGCTTGCATGGTGGGCAGCAGAAGCACTGTTTGAA ATTGAACCTGAAAATCCAGCAACATATGTTACTCTAGCCAATATTTATGCATCCGTTGGT TTGTTTGATGAAGTTGAGAATATGAGACGGACCATGGAATTAAGGGGCATAACTAAAATG CCAGCCTCAAGTTGGATTGAAGTTGGGACAAGAGTGCATGTGTTTCTGGTTGGGGATAAG TCGCATCCTCAAGCTGAAGAAATATATGCGCTTCTGAAGAAGCTGTATGTGAAAATGAGG GAAGAAGGGTATGTGGCAGACACCGGATTTGTTCTCCATGATGTAGAAGACGAGCAGAAG CAGCAGGACATTGGTTATCACAGCGAGCGGCTTGCTGTTGCATTTGGAATCATTGCCACT CCGAAGGGTTCTCCTATCAAGGTTTTCAAGAATCTGCGCATTTGTGGGGACTGTCATACC ACTATTAAGTTAATATCAAAGATTGTGCAAAGAGAGATCATTGTCAGGGACTCTAATAGG TTCCATCACTTCAAGAACGGGAGTTGTTCTTGCAGGGATTATTGGTGA