Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047946_T002
CDS Infomation	cds chromosome:B73_RefGen_v4:9:145935760:145958146:-1 gene:Zm00001d047946 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell cycle checkpoint protein RAD17
Sequence	ATGGGGAAGCGACCGCAGGTCGTTGTTCTGTCCTCTTCCTCTGGGGAAGATGACGGCGGG GGGCGCCGCGGCCCTCGGGCGCGGAGGCCGAGGACGCCCGCGACGGCTCCGGCGCAGGCT CAGGCAACAGGCGCCTCGAGGAAAAAGCCGCGTCGCGAGAGCAGCGCGGGGAGAGGACGT CGCCGCGCCGCAAAACTAGCGCCGTCCGTCTCCTTGAAGGCTGAATTTGATACGCTCTCT GAAGATTTTTCAGAATGTTTTAATGACTTCAGCATTCCAGGGCCTATACGGAAAACGAAA GAGCTTTGGGTTGACAAGTACACACCCCACTCGTTGGCTGAGCTTGCTGTTCATAAAAAG AAGATTGAAGATGTAAAGAAATGGATGGAAGAGAAGCTGAAGGCACCAAAGGCAACGGTT GGAGGATGGACCCTTGTCCTAACTGGGCAAACTGGTGTTGGAAAATCAGCAACTGTGAGA GCAATTGCTGATGACCTTGGAGCAGACTTATGTGAGTGGACGACTCCAGTACCAACACTG TGGGCTGAACATGTTCATGCTAATTCAGGATTACGCTATACATCCAAGCTTGAAGAATTT GAAACTTTTGTAGAGAAGATAAGGAAGTATTCAATGCTTTGTCCAACCAACACCAGGTCC CAAAGGAATCTCATTATCATTTTGATTGATGACATCCCTGTAACAAGTGGAAATGTTGCT TTTGCAAGACTAGGGAAATGCCTAACTGGTTTAATTCGAAGTACTCAAGTACCAACTGTC ATTTCACTCACTCACTACCACAAAAGTGAGAGTAACGATACTGCAATGTGGAACTCTGAG GACCTTGAGTCCTTACTTCAAGATGCTGGTGCTCACAAGATTGGTTTCAATCCAGTAACC ACAAATTCTATCAAGAAGATCCTTGTTCGAGTATGCAAAGAAGAAAGCTGCCATGCATCT GAAGAATTATTGCATCAAATAGCCACCTCTAGTGGAGGTGATATTAGACATGCAATAATG TCTCTTCAATACTATTGTCTTGACCCCAGAAGGCATAGTTCTGCATTGGCAACAAGTTCT AGTTCTACTGTCCCAAAGAACCTTGATTCTCTGGTTCCAGGGCATGAGAGCTATGGCCCT AGCAGTGCATTACCTTCCCCATGTGGAAGAGATGAGACACTTTCACTATTTCATGCCTTG GGGAAATTTTTGCACAACAAGAGGGAAACTAATAGTGATGCTGATATCGACCTGGATTCG TTTCCTCTTAAAGAAAACCTAAGAAGAAATGCACTCAAAATGGATGTTCCAGAAAAGATT CTTTCACAAGCACACGGAAAAGTACGAACAGTTGTGGATTTTCTTTATGAAAATGTTATT GATTTCATTGACAGTGAAGCTGTTGATGATGCATGGGCTGTGGTATCATATTTGGGTGAG GCGGATTGTCTTCTTACTGGTGGTCCAGTCGCATCATACAACTCAGAAAACATAGCACAG CTCATTGCTGCCTCTGTTGCGGCACGGGGAGTTCTTTTTGGAAATGCTCATGTCACACCA TCAAGGTGGCATACAATCCGGAGCCCGAGGCTCTGGCAAACTGATCAATCATCTCGATCC AATAAGGACCACATTCTGAAGGAAAGATTTGATTGTTCAAGGACGTGTGGTTTTTGCAAC TTCGCTGACTTGGTCACAGAATTCAGACCATTGGAGAGATGGATTGGTCCTCGTAATGGT GGGCATAGAAGCAGCTGCTTGCCCCACGGCGTAGGTTGCTCGCCCATGGGAGTCGCTGAT GGAAATAATTCTGAAGAGGATGACGATATGATAGAAGATTGTTAA

Peptide Sequence

PEP ID	Zm00001d047946_P002
PEP Infomation	pep chromosome:B73_RefGen_v4:9:145935760:145958146:-1 gene:Zm00001d047946 transcript:Zm00001d047946_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell cycle checkpoint protein RAD17
Sequence	MGKRPQVVVLSSSSGEDDGGGRRGPRARRPRTPATAPAQAQATGASRKKPRRESSAGRGR RRAAKLAPSVSLKAEFDTLSEDFSECFNDFSIPGPIRKTKELWVDKYTPHSLAELAVHKK KIEDVKKWMEEKLKAPKATVGGWTLVLTGQTGVGKSATVRAIADDLGADLCEWTTPVPTL WAEHVHANSGLRYTSKLEEFETFVEKIRKYSMLCPTNTRSQRNLIIILIDDIPVTSGNVA FARLGKCLTGLIRSTQVPTVISLTHYHKSESNDTAMWNSEDLESLLQDAGAHKIGFNPVT TNSIKKILVRVCKEESCHASEELLHQIATSSGGDIRHAIMSLQYYCLDPRRHSSALATSS SSTVPKNLDSLVPGHESYGPSSALPSPCGRDETLSLFHALGKFLHNKRETNSDADIDLDS FPLKENLRRNALKMDVPEKILSQAHGKVRTVVDFLYENVIDFIDSEAVDDAWAVVSYLGE ADCLLTGGPVASYNSENIAQLIAASVAARGVLFGNAHVTPSRWHTIRSPRLWQTDQSSRS NKDHILKERFDCSRTCGFCNFADLVTEFRPLERWIGPRNGGHRSSCLPHGVGCSPMGVAD GNNSEEDDDMIEDC

Transcript Sequence

Transcript ID	Zm00001d047946_T002
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:145935760:145958146:-1 gene:Zm00001d047946 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cell cycle checkpoint protein RAD17
Sequence	GGAGCAAAACAAACCCTCACAATATCGCTAGTCGTGCAGATTTCCGAGCTCTAGCCCTTG GCCCTTGAAATTGCTATCCCCGCTATCACCATTCCGCCAATGGGGAAGCGACCGCAGGTC GTTGTTCTGTCCTCTTCCTCTGGGGAAGATGACGGCGGGGGGCGCCGCGGCCCTCGGGCG CGGAGGCCGAGGACGCCCGCGACGGCTCCGGCGCAGGCTCAGGCAACAGGCGCCTCGAGG AAAAAGCCGCGTCGCGAGAGCAGCGCGGGGAGAGGACGTCGCCGCGCCGCAAAACTAGCG CCGTCCGTCTCCTTGAAGGCTGAATTTGATACGCTCTCTGAAGATTTTTCAGAATGTTTT AATGACTTCAGCATTCCAGGGCCTATACGGAAAACGAAAGAGCTTTGGGTTGACAAGTAC ACACCCCACTCGTTGGCTGAGCTTGCTGTTCATAAAAAGAAGATTGAAGATGTAAAGAAA TGGATGGAAGAGAAGCTGAAGGCACCAAAGGCAACGGTTGGAGGATGGACCCTTGTCCTA ACTGGGCAAACTGGTGTTGGAAAATCAGCAACTGTGAGAGCAATTGCTGATGACCTTGGA GCAGACTTATGTGAGTGGACGACTCCAGTACCAACACTGTGGGCTGAACATGTTCATGCT AATTCAGGATTACGCTATACATCCAAGCTTGAAGAATTTGAAACTTTTGTAGAGAAGATA AGGAAGTATTCAATGCTTTGTCCAACCAACACCAGGTCCCAAAGGAATCTCATTATCATT TTGATTGATGACATCCCTGTAACAAGTGGAAATGTTGCTTTTGCAAGACTAGGGAAATGC CTAACTGGTTTAATTCGAAGTACTCAAGTACCAACTGTCATTTCACTCACTCACTACCAC AAAAGTGAGAGTAACGATACTGCAATGTGGAACTCTGAGGACCTTGAGTCCTTACTTCAA GATGCTGGTGCTCACAAGATTGGTTTCAATCCAGTAACCACAAATTCTATCAAGAAGATC CTTGTTCGAGTATGCAAAGAAGAAAGCTGCCATGCATCTGAAGAATTATTGCATCAAATA GCCACCTCTAGTGGAGGTGATATTAGACATGCAATAATGTCTCTTCAATACTATTGTCTT GACCCCAGAAGGCATAGTTCTGCATTGGCAACAAGTTCTAGTTCTACTGTCCCAAAGAAC CTTGATTCTCTGGTTCCAGGGCATGAGAGCTATGGCCCTAGCAGTGCATTACCTTCCCCA TGTGGAAGAGATGAGACACTTTCACTATTTCATGCCTTGGGGAAATTTTTGCACAACAAG AGGGAAACTAATAGTGATGCTGATATCGACCTGGATTCGTTTCCTCTTAAAGAAAACCTA AGAAGAAATGCACTCAAAATGGATGTTCCAGAAAAGATTCTTTCACAAGCACACGGAAAA GTACGAACAGTTGTGGATTTTCTTTATGAAAATGTTATTGATTTCATTGACAGTGAAGCT GTTGATGATGCATGGGCTGTGGTATCATATTTGGGTGAGGCGGATTGTCTTCTTACTGGT GGTCCAGTCGCATCATACAACTCAGAAAACATAGCACAGCTCATTGCTGCCTCTGTTGCG GCACGGGGAGTTCTTTTTGGAAATGCTCATGTCACACCATCAAGGTGGCATACAATCCGG AGCCCGAGGCTCTGGCAAACTGATCAATCATCTCGATCCAATAAGGACCACATTCTGAAG GAAAGATTTGATTGTTCAAGGACGTGTGGTTTTTGCAACTTCGCTGACTTGGTCACAGAA TTCAGACCATTGGAGAGATGGATTGGTCCTCGTAATGGTGGGCATAGAAGCAGCTGCTTG CCCCACGGCGTAGGTTGCTCGCCCATGGGAGTCGCTGATGGAAATAATTCTGAAGAGGAT GACGATATGATAGAAGATTGTTAATCGTGAGTCGCATTATGAGATGCCAACATATCATTA TGGATGCTGACTAGCTGATTCAAATAGTGGCTCGCTGTTTAAGGGTGCCATTGATATTTA AGTTTTATGAAGCTAATTGTTGCAC