Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047893_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:9:144511512:144516350:1 gene:Zm00001d047893 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxykinase homolog2 description: phosphoenolpyruvate carboxykinase homolog2
Sequence	ATGGCGACGCCGAACGGGCTTGCTCGGATCGAGACGAACGGGGCGACCAAGCCCGACAAC GGCGTGTGCCACGACGACAGCTCGGCGCCGGTGCGCGCGCAGACCATCGACGAGCTGCAC TCGCTGCAGCGGAAGCGGTCGGCGCCAACCACGCCCATCAAGGACGGCGCCGCCTCGACC TTCGCCGCCGCGCTCTCCGAGGAGGAGCGCCACAGGCAGCAGCTGCAGTCCATCAGCGCG TCGTTGGCGTCTCTGACACGTGAAACCGGGCCGAAAGTGGTCAAGGGCGACCCGGCCCGG AGGGGCGAGGCCCCCGCGACGGGTGCACCGCCGACGCCGCAGGCGCACCACCAGCACCAC CACCCCGCCGCCCCCACCATCGCCGTCAGCGACAGCTCCCTCAAGTTCACCCATGTCCTC TACAACCTCTCGCCTGCTGAGCTGTACGAGCAGGCCATCAAGTACGAGAAGGGGTCGTTC ATCACGTCCACCGGCGCGCTGGCGACGCTGTCCGGCGCCAAGACCGGGCGGTCGCCCAGG GACAAGCGCGTCGTCAAGGACGAGGTCGCGGCGCGGGACCTGTGGTGGGGCAAGGGCTCG CCCAACATCGAGATGGACGAGCACACGTTCCTGACCAACAGGGAGAGGGCCGTGGACTAC CTCAACTCCCTGGACAAGGTGTTCGTGAACGACCAGTTTCTCAACTGGGACCCCGAGAAC CGGATCAAGGTCCGCATCATCTCCGCCAGGGCGTACCACTCCCTCTTCATGCACAACATG TGCATCCGGCCCACGGACGAGGAGCTGGAGAGCTTCGGCACGCCGGACTTCACCATCTAC AACGCCGGCCAGTTCCCCTGTAACCGCTACACGCACTACATGACGTCGTCCACCAGCGTA GACATCAACCTCGCCAGGAGGGAGATGGTGATCCTGGGCACGCAGTACGCCGGCGAGATG AAGAAGGGGCTGTTCGGCGTCATGCACTACCTCATGCCCAAGCGCGGCATCCTCTCGCTG CACTCCGGCTGCAATATGGGCAAGGACGGCGACGTCGCCCTCTTCTTTGGCCTCTCAGGT ACCGGGAAGACGACGCTGTCGACGGATCACAACAGGCTTCTGATCGGCGACGACGAGCAC TGCTGGAGCGAGAATGGCGTGTCCAACATCGAGGGCGGCTGCTATGCCAAGTGCATAGAC CTATCGCAGGAGAAAGAGCCTGATATCTGGAACGCCATCAAGTTCGGAGCCGTGCTGGAG AACGTTGTCTTCGATGAGCATACTCGTGAAGTTGACTACACCGACAAATCTGTCACCGAA CCATTCTTGCATCGTAGAGAACACTCGGGCTGCCTACCCGATCGAGTACATCCCCAACGC CAAGATACCATGCGTCGGTCCACACCCCAAGAACGTGATCCTGCTGGCGTGCGACGCCTT CGGCGTGCTCCCGCCGGTGAGCAAGCTGGACCTGGCGCAGACCATGTACCACTTCATCAG CGGATACACCGCCCTGGTCGCCGGCACGGAGGACGGCATCAAGGAGCCACAGGCCACCTT CTCCGCCTGCTTCGGCGCGGCCTTCATCATGCTCCACCCGACCAAGTACGCCGCCATGCT CGCCGAGAAGATGCAGAAGTACGGCGCCACAGGGTGGCTCGTCAACACCGGCTGGTCTGG CGGCAGGTACGGTGTGGGCAAGAGGATCCGGCTTCCCTACACCAGGAAGATCATCGACGC CATCCACTCCGGCGAGCTTCTCACCGCCAACTACCAGAAGACCGAGGTCTTTGGCCTGGA GATCCCGACTGA

Peptide Sequence

PEP ID	Zm00001d047893_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:9:144511512:144516350:1 gene:Zm00001d047893 transcript:Zm00001d047893_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxykinase homolog2 description: phosphoenolpyruvate carboxykinase homolog2
Sequence	MATPNGLARIETNGATKPDNGVCHDDSSAPVRAQTIDELHSLQRKRSAPTTPIKDGAAST FAAALSEEERHRQQLQSISASLASLTRETGPKVVKGDPARRGEAPATGAPPTPQAHHQHH HPAAPTIAVSDSSLKFTHVLYNLSPAELYEQAIKYEKGSFITSTGALATLSGAKTGRSPR DKRVVKDEVAARDLWWGKGSPNIEMDEHTFLTNRERAVDYLNSLDKVFVNDQFLNWDPEN RIKVRIISARAYHSLFMHNMCIRPTDEELESFGTPDFTIYNAGQFPCNRYTHYMTSSTSV DINLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKDGDVALFFGLSG TGKTTLSTDHNRLLIGDDEHCWSENGVSNIEGGCYAKCIDLSQEKEPDIWNAIKFGAVLE NVVFDEHTREVDYTDKSVTEPFLHRREHSGCLPDRVHPQRQDTMRRSTPQERDPAGVRRL RRAPAGEQAGPGADHVPLHQRIHRPGRRHGGRHQGATGHLLRLLRRGLHHAPPDQVRRHA RREDAEVRRHRVARQHRLVWRQVRCGQEDPASLHQEDHRRHPLRRASHRQLPEDRGLWPG DPD

Transcript Sequence

Transcript ID	Zm00001d047893_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:144511512:144516350:1 gene:Zm00001d047893 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:phosphoenolpyruvate carboxykinase homolog2 description: phosphoenolpyruvate carboxykinase homolog2
Sequence	CCCACACCGCTTCACTCGTTTCCTTCCGATCCATACACACCGCGCACGTACGCGTACTCC ATCGTCCCGGTGCAGGCGGGTTCACGTCACGACCTCGGGCGAGACGAGATGGCGACGCCG AACGGGCTTGCTCGGATCGAGACGAACGGGGCGACCAAGCCCGACAACGGCGTGTGCCAC GACGACAGCTCGGCGCCGGTGCGCGCGCAGACCATCGACGAGCTGCACTCGCTGCAGCGG AAGCGGTCGGCGCCAACCACGCCCATCAAGGACGGCGCCGCCTCGACCTTCGCCGCCGCG CTCTCCGAGGAGGAGCGCCACAGGCAGCAGCTGCAGTCCATCAGCGCGTCGTTGGCGTCT CTGACACGTGAAACCGGGCCGAAAGTGGTCAAGGGCGACCCGGCCCGGAGGGGCGAGGCC CCCGCGACGGGTGCACCGCCGACGCCGCAGGCGCACCACCAGCACCACCACCCCGCCGCC CCCACCATCGCCGTCAGCGACAGCTCCCTCAAGTTCACCCATGTCCTCTACAACCTCTCG CCTGCTGAGCTGTACGAGCAGGCCATCAAGTACGAGAAGGGGTCGTTCATCACGTCCACC GGCGCGCTGGCGACGCTGTCCGGCGCCAAGACCGGGCGGTCGCCCAGGGACAAGCGCGTC GTCAAGGACGAGGTCGCGGCGCGGGACCTGTGGTGGGGCAAGGGCTCGCCCAACATCGAG ATGGACGAGCACACGTTCCTGACCAACAGGGAGAGGGCCGTGGACTACCTCAACTCCCTG GACAAGGTGTTCGTGAACGACCAGTTTCTCAACTGGGACCCCGAGAACCGGATCAAGGTC CGCATCATCTCCGCCAGGGCGTACCACTCCCTCTTCATGCACAACATGTGCATCCGGCCC ACGGACGAGGAGCTGGAGAGCTTCGGCACGCCGGACTTCACCATCTACAACGCCGGCCAG TTCCCCTGTAACCGCTACACGCACTACATGACGTCGTCCACCAGCGTAGACATCAACCTC GCCAGGAGGGAGATGGTGATCCTGGGCACGCAGTACGCCGGCGAGATGAAGAAGGGGCTG TTCGGCGTCATGCACTACCTCATGCCCAAGCGCGGCATCCTCTCGCTGCACTCCGGCTGC AATATGGGCAAGGACGGCGACGTCGCCCTCTTCTTTGGCCTCTCAGGTACCGGGAAGACG ACGCTGTCGACGGATCACAACAGGCTTCTGATCGGCGACGACGAGCACTGCTGGAGCGAG AATGGCGTGTCCAACATCGAGGGCGGCTGCTATGCCAAGTGCATAGACCTATCGCAGGAG AAAGAGCCTGATATCTGGAACGCCATCAAGTTCGGAGCCGTGCTGGAGAACGTTGTCTTC GATGAGCATACTCGTGAAGTTGACTACACCGACAAATCTGTCACCGAACCATTCTTGCAT CGTAGAGAACACTCGGGCTGCCTACCCGATCGAGTACATCCCCAACGCCAAGATACCATG CGTCGGTCCACACCCCAAGAACGTGATCCTGCTGGCGTGCGACGCCTTCGGCGTGCTCCC GCCGGTGAGCAAGCTGGACCTGGCGCAGACCATGTACCACTTCATCAGCGGATACACCGC CCTGGTCGCCGGCACGGAGGACGGCATCAAGGAGCCACAGGCCACCTTCTCCGCCTGCTT CGGCGCGGCCTTCATCATGCTCCACCCGACCAAGTACGCCGCCATGCTCGCCGAGAAGAT GCAGAAGTACGGCGCCACAGGGTGGCTCGTCAACACCGGCTGGTCTGGCGGCAGGTACGG TGTGGGCAAGAGGATCCGGCTTCCCTACACCAGGAAGATCATCGACGCCATCCACTCCGG CGAGCTTCTCACCGCCAACTACCAGAAGACCGAGGTCTTTGGCCTGGAGATCCCGACTGA GATCAAGGGCGTGCCGTCGGAAATCCTCGACCCAATCAACACCTGGACGGACAAGGCCGC GTACAAGGAGACGCTCCTGAGGCTTGCCGGGCTCTTCAAGAAGAACTTCGAGGTGTTCGC CAGCTACAAGATCGGGGACGACAGCAACCTGACCGACGAGATCCTCGCCGCAGGCCCCAA CTTCTGAACTAAAGCAGTGGGTCCGGATGAATAAAACGGTGGTATGCGTGTGAAGAAGAA GATGATGACGACGAAAATAGTGTGTTGGATCGATGGGCCAGCACAGTGTAGACTAGCTTT TGTATATTATCTCGGGTTGGAAATCTGGTGTTGTTACCTAAAATGTTGGTCTGTTCTATC GGCTTGTTGAAAACAGTTTGCGCGTGCTTGCATCTTGGCCCCCCTGTATTCTCTGTGGTT TCAGAATTTGAACACGAAACAGCTTGGTCTCGGGATCATGTTGGTTTCATAT