Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047882_T014
CDS Infomation	cds chromosome:B73_RefGen_v4:9:144132360:144139943:-1 gene:Zm00001d047882 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase component HRD3A
Sequence	ATGCCTTCCCCGATGGCTCGCATCTTCCACCGCCATCTCCTCCTCGCCGTCGTCACCTTA GCCGTGGCCGCTTCTCTCCTTCGCCCAGCTGCCGCAGTGCGCCCATTTGTTTTGGTTCTC TCCGGTGAGGACTTCCTCAAGGATCCGGCCGCGCACCCGTCCCTTCCCTCTGCCGACTCC GACGACGACGATGGGTGGGACGACTTCGCCGACGATTCACCGGCCGCCGACCCGCTACTC TCTCCGTCCTCCTGGGCCCCCCTCCTCGACCCAACCATCTCTCTCCCCTCTGGCGATGAG ACGGACTCGCCGGCCGACGCGCTCTTCGTCGCGGGCACCCGCGCGATGCTATCCGCAGCG TCTGATGGAGACGACGCGGCGTTCACCACGGCTGCCGCGCAGATCGAGGCCTCGGCAGAG GCGGGGCACCCGGGCGCGCAGTCTGCGCTCGCGTTCCTTACCGGCGCCGGGATGACGCGT CCGGCATCCCGGTCGCTCGCGTTCCTGCTGCACAAGTTCGCCGCCGACGCAGGAGATCTC CAGTCAAAGATGGCCCTCGCGTACTCCTACTTCCGCCAGGAGATGTATGAAGAAGCTGTT ATACTATACGCTGAACTTGCAGAAGCTGCCCTAACAAGCTCCTTGATATCAAAGGAGCCA CCAGTGATTGAACCAATCCGTCTTCACAGTGGGACTGAAGAAAATAAAGAGGCCTTGAGG AAGTCCCGAGGTGAGGACGATGAAGATTTCCAAATCACAGAGTATCAGGCACAGCGAGGC AACGCTGCCAACATGTACAAATTAGGGCTTCTGTATTACTATGGACTACGTGGGCTCCGC CGTGATTATGGAAAAGCATTTCATTGGTTTTCTAAGGCTGTTGAGAAAGGCGAGACACGG GCATTGGAGCTTCTGGGTGAGATCTATGCTAGAGGTGCTGGAGTGGAAAGGAACTATACT GAAGCGTACAAGTGGTTGGCACTTGCTGCCAAGCAGCAACATTACTCAGCTTACAATGGA TTGGGTTATCTATATGTTAAAGGCTATGGGGTGGAGAAGAAAAACTTGACAAAAGCAAGG GAACTTTTCGAACTTGCAGCCGAGAATAAGGAAGCCGGTGGACATTATAACCTTGGTGTG TTGTATCTTAAGGGAATTGGTGTGAAGAGGGATGTAATTAGAGCATGTAATTTCTTGCTT CATGCAGTTAATGCTGGGCAACCAAAAGCTATTTATCAGGTGGCGAAGCTGTTCCAGAAA GGCATTGGTCTTAAGAGGAATCTCCATATGGCAACAATGCTGTACAAGTCTATTGCTGAG AGGGGACCCTGGAGTTCACTGTCCAGATGGGCTCTGGAGTCTTATTTGAAAGGCGATGTA GGGAAAGCATTGCTCTTGTATTCCAGAATGGCAGATCTTGGATATGAGGTTGCACAGAGC AATGCTGCCTGGATTCTGGATAGGTATAGTGATCAAAGTATTTGCATGGGAGAATCTAGT TTTTGCACAGATATGGAAAGACATCTTCGTGCACATGCTTTGTGGTGGCATGCATCCGAG CAGGGTAATGAGCATGCTGCTTTGTTGATTGGCGATGCCTACTACTATGGCCGGGGCGTC GCAAGGGACTATGAACGTGCAGCAGAGGCATATATGCATGCTCGGTCACAGTCTAATGCT CAAGCTATTTTTAACCTTGGGTACATGCATGAGCATGGTCATGGACTCCCCCTTGATTTG CAC

Peptide Sequence

PEP ID	Zm00001d047882_P014
PEP Infomation	pep chromosome:B73_RefGen_v4:9:144132360:144139943:-1 gene:Zm00001d047882 transcript:Zm00001d047882_T014 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase component HRD3A
Sequence	MPSPMARIFHRHLLLAVVTLAVAASLLRPAAAVRPFVLVLSGEDFLKDPAAHPSLPSADS DDDDGWDDFADDSPAADPLLSPSSWAPLLDPTISLPSGDETDSPADALFVAGTRAMLSAA SDGDDAAFTTAAAQIEASAEAGHPGAQSALAFLTGAGMTRPASRSLAFLLHKFAADAGDL QSKMALAYSYFRQEMYEEAVILYAELAEAALTSSLISKEPPVIEPIRLHSGTEENKEALR KSRGEDDEDFQITEYQAQRGNAANMYKLGLLYYYGLRGLRRDYGKAFHWFSKAVEKGETR ALELLGEIYARGAGVERNYTEAYKWLALAAKQQHYSAYNGLGYLYVKGYGVEKKNLTKAR ELFELAAENKEAGGHYNLGVLYLKGIGVKRDVIRACNFLLHAVNAGQPKAIYQVAKLFQK GIGLKRNLHMATMLYKSIAERGPWSSLSRWALESYLKGDVGKALLLYSRMADLGYEVAQS NAAWILDRYSDQSICMGESSFCTDMERHLRAHALWWHASEQGNEHAALLIGDAYYYGRGV ARDYERAAEAYMHARSQSNAQAIFNLGYMHEHGHGLPLDLH

Transcript Sequence

Transcript ID	Zm00001d047882_T014
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:144132360:144139943:-1 gene:Zm00001d047882 gene_biotype:protein_coding transcript_biotype:protein_coding description:ERAD-associated E3 ubiquitin-protein ligase component HRD3A
Sequence	TAGGCATGCCTTCCCCGATGGCTCGCATCTTCCACCGCCATCTCCTCCTCGCCGTCGTCA CCTTAGCCGTGGCCGCTTCTCTCCTTCGCCCAGCTGCCGCAGTGCGCCCATTTGTTTTGG TTCTCTCCGGTGAGGACTTCCTCAAGGATCCGGCCGCGCACCCGTCCCTTCCCTCTGCCG ACTCCGACGACGACGATGGGTGGGACGACTTCGCCGACGATTCACCGGCCGCCGACCCGC TACTCTCTCCGTCCTCCTGGGCCCCCCTCCTCGACCCAACCATCTCTCTCCCCTCTGGCG ATGAGACGGACTCGCCGGCCGACGCGCTCTTCGTCGCGGGCACCCGCGCGATGCTATCCG CAGCGTCTGATGGAGACGACGCGGCGTTCACCACGGCTGCCGCGCAGATCGAGGCCTCGG CAGAGGCGGGGCACCCGGGCGCGCAGTCTGCGCTCGCGTTCCTTACCGGCGCCGGGATGA CGCGTCCGGCATCCCGGTCGCTCGCGTTCCTGCTGCACAAGTTCGCCGCCGACGCAGGAG ATCTCCAGTCAAAGATGGCCCTCGCGTACTCCTACTTCCGCCAGGAGATGTATGAAGAAG CTGTTATACTATACGCTGAACTTGCAGAAGCTGCCCTAACAAGCTCCTTGATATCAAAGG AGCCACCAGTGATTGAACCAATCCGTCTTCACAGTGGGACTGAAGAAAATAAAGAGGCCT TGAGGAAGTCCCGAGGTGAGGACGATGAAGATTTCCAAATCACAGAGTATCAGGCACAGC GAGGCAACGCTGCCAACATGTACAAATTAGGGCTTCTGTATTACTATGGACTACGTGGGC TCCGCCGTGATTATGGAAAAGCATTTCATTGGTTTTCTAAGGCTGTTGAGAAAGGCGAGA CACGGGCATTGGAGCTTCTGGGTGAGATCTATGCTAGAGGTGCTGGAGTGGAAAGGAACT ATACTGAAGCGTACAAGTGGTTGGCACTTGCTGCCAAGCAGCAACATTACTCAGCTTACA ATGGATTGGGTTATCTATATGTTAAAGGCTATGGGGTGGAGAAGAAAAACTTGACAAAAG CAAGGGAACTTTTCGAACTTGCAGCCGAGAATAAGGAAGCCGGTGGACATTATAACCTTG GTGTGTTGTATCTTAAGGGAATTGGTGTGAAGAGGGATGTAATTAGAGCATGTAATTTCT TGCTTCATGCAGTTAATGCTGGGCAACCAAAAGCTATTTATCAGGTGGCGAAGCTGTTCC AGAAAGGCATTGGTCTTAAGAGGAATCTCCATATGGCAACAATGCTGTACAAGTCTATTG CTGAGAGGGGACCCTGGAGTTCACTGTCCAGATGGGCTCTGGAGTCTTATTTGAAAGGCG ATGTAGGGAAAGCATTGCTCTTGTATTCCAGAATGGCAGATCTTGGATATGAGGTTGCAC AGAGCAATGCTGCCTGGATTCTGGATAGGTATAGTGATCAAAGTATTTGCATGGGAGAAT CTAGTTTTTGCACAGATATGGAAAGACATCTTCGTGCACATGCTTTGTGGTGGCATGCAT CCGAGCAGGGTAATGAGCATGCTGCTTTGTTGATTGGCGATGCCTACTACTATGGCCGGG GCGTCGCAAGGGACTATGAACGTGCAGCAGAGGCATATATGCATGCTCGGTCACAGTCTA ATGCTCAAGCTATTTTTAACCTTGGGTACATGCATGAGCATGGTCATGGACTCCCCCTTG ATTTGCACTT