Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047863_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:9:143659767:143668315:-1 gene:Zm00001d047863 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 9A
Sequence	ATGAATGAATTGGATTTTCAAAGGAGAATGGATTCAGCAAGGGAACGCATGTTGGGGTTA TCAGCTGACTCAGAATACCAGGATAATCAAGCCAATCCTGATGTCCAAGATCGTACGTCA CAAAGTCTTGGAGCTAACAGAAATTCTGATGCCAGTTTATCTTTGAAAGACCACGTCCAA GGTTCAGGGCAGGATATGAGAAGGGACAGTGATGTGACTGTGAGTGGTAAACAAGCTGAG CAGGTGCAATCTATTTCTGAATTAGAGAAGAAAGGAACTGCGGAGCTCCTCAATGAGGAT GACTTGAACAAAAAATTCCAGGAGTACCCGTTTCTGTTTGCCCGTGCTGGTGATCTGACT ATTGCTGATGTAGAGAGCCTATTGAATTCGTACAAGCATCTAGTACTTCGGTATGTAGCA CTTGCACAAGGTATGGGTGTCAGTCCTGAAACCACTCTTACTCAGAACGGGCAGACATCT GATCTTGTAGTATCTGAGGAGCCAGAAATTTTGAATAGCGTGGTAAAGGACAACGAGAAC AGTGCAATAATTAACAAAAATGTTGATGATGTTATAAGCTTAAACCATCATTCAGAAGCA GTTGACACAGAAGCATCTGAACAAATGAACCAGAGAACTGCTGTTGATTCCAGTGATGAT CTGGAGGCATTGGGTCGGCCTGAGAATGCATGA

Peptide Sequence

PEP ID	Zm00001d047863_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:9:143659767:143668315:-1 gene:Zm00001d047863 transcript:Zm00001d047863_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 9A
Sequence	MNELDFQRRMDSARERMLGLSADSEYQDNQANPDVQDRTSQSLGANRNSDASLSLKDHVQ GSGQDMRRDSDVTVSGKQAEQVQSISELEKKGTAELLNEDDLNKKFQEYPFLFARAGDLT IADVESLLNSYKHLVLRYVALAQGMGVSPETTLTQNGQTSDLVVSEEPEILNSVVKDNEN SAIINKNVDDVISLNHHSEAVDTEASEQMNQRTAVDSSDDLEALGRPENA

Transcript Sequence

Transcript ID	Zm00001d047863_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:143659767:143668315:-1 gene:Zm00001d047863 gene_biotype:protein_coding transcript_biotype:protein_coding description:Vacuolar protein sorting-associated protein 9A
Sequence	AGCAATTCCGACTCCGACAATTCCAGAAAATCGCCGCGTGGTCGGTCCATCCGGGTCGAC TTGACTTCCCTCTGCAACCTCGGAACCCAGCCAATCCGCTGATCTCAACTGCCGGGCACT CCGATCCGGCAACGATGGAGGGGAGCGCCGACTCCTTCGGGTCCTTGACGGCGCCGCTTG CCTGGCACGACTTCCTCGAGCGCATGCGCCAGCCTTCCGCCGCCGAGTTCGTCAAGTCCA TTAAAAGCTTTATTGTGACATTCTCAAACAGAGCTCCTGATCCAGAGAAGGATAGTACTG CTATCCAGGAGTTCCTGGAAAACATGGAAGGGGCTTTCAGAGCCCACACCCCTTGGGCTG GCAGTTCAGAGGAAGAACTAGAGAGTGCTGGTGAGGGACTTGAGAAATATGTTATGACAA AGCTGTTTAATCGGGTATTCGCATCAGTCCCAGAAGATGTGAAGAGTGATGAAGAACTTT TTGAGAAAATGTCTTTGCTACAGCAATTTGTAAGGCCTGAAAACTTGGATATAAAACCAG AGTACCAGAATGAAACATCCTGGCTGGTATGAGAATTAACTTCCCTCGTTTTTGGGCATT TTTTTGCTTGATGTATTGCATCTCTGGCAAGCTGCACACATGAATAAGTTTCTGGCAGAA GCTGAACCAGGATTGAATTGTACTTGTGTCTTGCGTTGGGTTGGTCTCTTGGATCTTTCT ATGTATTATGTCTATACTCTGTAGACTACTGGCCAGCCACTCCATTTACGTATTACTCTT CCATTGTGAGTTTTTGCTCTTCAATTTCTTATCACTCCCAGTCACTCAGCTATCCACATT TCCACACAAGTAGTAGTTAAGGACACATTTAGTTTCGAAGGACAGTGAACTTTGTATGAT TCATTGTGAATCTGCTGATCTTCAAATTGGACAACAAATGTATACTCCTTCCTGTTAGAG GAGGTACTGTGACAGGATTAGATTGCATTGCATTGATCCCCATGGGCTGATTATATACAA TTCATAGCACTAACCCTACGTCGTAGGCAATGTGGTACAATGCATATCTACATATATGCA GCGTTGGGTGAGCCCAGCGTAACTACGGTTGTCGGGAACAACGGTTGCCTGGACGTGGAG GTAGGCGACAACGGCAGCCTCACAGTCTGCAGTGGGGTTGCCCTGTGATGGGGTCCGACG GCCATGGGGGGTCTGTAAGCCCAAACCCTGCCTGACGATGGTGGCCTTTTGCTTGAGGGC AGCAACGACAGCCTTCTCTTGCTCGAGAAGTGTGGCTGCCTGGACGCGAGCGCGTGCGTT GACAGCCTCCTTTTCCATAGCCTAAGCTGCGACGAGCATATGTCGTTGATCTTGCCAAAG GCCGTGTCCTCCTCAACGTGGGTGCGTTCCTAGTCACTCGATGAGGTCCCTGTCATGGGT GCAGGAGGAAGGAGATGCTTTTGCATTTTTGTGGCGACGTGGCACAAGGGGAGAGGAGGC GACAGGTGACAGGCGACAAAGATCCTAGAGGGATGACTGCCCTGGAGAGGCGACAGTCCT AGAGGGGTGGCGTCCAGGGAAGGAGCAAAAGCGAGATTAGACTCATGATACCATGTTAGA TGAGGTATTGCCACAAAAAATTAGATTGTATTGCATTGAGCTTCATGTGTTGATTATATA CAGTGTATAGGACTAACACCCGACGTTAGTAGACAATACAGTGCAATTATTATCTACATA TATGTAGCGCTAGGTGAGGCCAGCCCAACGATAGTTATAAGGCCTAAGGCTATGGCCAGC AAATCGTGCATATGGCCATGCAAAACACTGTAAACTGTCCTATTTACAGAGTATAGTTTA AAATGGTTGTTCGCTTCGGATTAAAGCCAATTGTTCAGACTGCTGCAGCTGCAATTCATA GAGACAACACTGTTTAAACAATAGAAGCCGGTACAGATTAAAGCCAAGAGAACAAGCTTC TGCTAGTGATAGCCTAATAGGGCTCTATGGCTAATTCTAACACTCCCTACTGGCCAAGCC ATTTATTTAGGGCCAACCTATTTATTTAGAGACCTCGTGACAACTTTTGATTCTTCATAT AGGTGTGACTCACTGATACTTGTTCTTGTTTTTTGTATAGCTCGCACAGAAGGAGCTGCA GAAAATAAACATGTATAAAGCTCCAAGGGATAAGCTTGCCTGCATTCTGAACTGCTGTAA AGTTATAAATAATTTACTTCTAAATGCTTCCATTGTGTCCAATGAAACCCCCCCTGGAGC TGACGAATTCCTTCCAGTCCTTATCTACGTCACCATAAAGGTATGGTTTATAGCCTTTGC AAAAGAAGTATCTGTTGTCAGTAGTACTTTTTTTATATTCAGTTTCGCGTTGAAGATGGA TCCCCATTTACACGCAAGTGCCAGTGTCAGTTTGGTAGAATTGACCTAGCTTTTTATATA TGCTGGAATTTTTTTATATGTGCTGGAAAAAATTCAGCCAAGTGTGATGAAATCTGATGC GTTGGCATGTCTCTTGTGACTTTTGAGGTATCCTTAACTGTGTCAGACTGTCCACACTCA TGGTGCATCCTTGCTTTGTTCCTCATTTCCTTTTCCCTCGAGCACTATGGCTCTGTAGGT ATCTACTTGGATAAGTTGTCTCGTAGCAATAACTTTTAGTTAGGATCTACTTGAGCTTTT CTTACAAGAATGATTATACTTCCAAATTCCAATAGCAGTCAAACTATGTATTTTTCAGGA TCTTGAAAAGATACAATAATAGAACCACTAGGCTTAGTTTATAGGAACACAGGGCCAGTC TCAGTTGGGGCCGCTGATTTCCAAGACTCGTGTTGTGGATTGGTTTCATCCCCAGGAAAC CATTTTTCTACCATGAAATTTTGATCATCTCATGCCAGCACATTTACTAAGTTGGTAGCT TATTTAATGTTCATGAAACCCCCACTAAGACTGGCCTAATAAGTTGTCATGCTGAGGGCT AAAAGCCGTTTTGATTCGACAATTCCTGCATGGCTTCAGCTTTGGCAGTAGACCTCGTAT CTTTTCCTTTTCCCTTTGTAGTTAGGTTGTTTTATCCTTTGTAATCTTCTTTTCTGTCTG CTTCTAACTCTGTTATTTTAAAGTTTTAATAAAATTTTCAGTAGGGGCTCGCCCCTCCTG TCTTATCAAAAAAAAGACTGGCCTAATAATGAGAAACATGATTACATGTGACGGCATGCA TGCCGAACTGATCAATAAGAACTTTGGATTGGAGCATCTTGTATAGGTGTTTGTATTGTT CAGTCAATCACGTGTAACAAATATTTGGTCTTAAATAACTTATTAGATCTGTGCCCTTCC GCAAGTCTCACTCAGCACAAAAAATGTATTGTGGTTGTCTTCTAACAGTATTACAAATTT ACCCTTGCATCTTGACTAGCTTTAATTGTCGACTTCAGTCTCATAAAGAGTGTCATTCTC ACTTGCTGAGAAGTCAAACATTTTCAATTTTGACCAAATATATAAAAGAAAATATTAATT TTTATGATGCATAATTAGTATCATTAGATAAATCGCCGAATATATTTGCATAGAGTTATT TGAAGATACAAATGGTGCTAATATTTTCTATGAACCTAGTTAAACTTAAGAAAGTTTGAC TAGCACTAGCCCCATAGCGACACTCTTTTTGGGATGGAGTAAACAATAATGTCAGGATCC TTTTGTTGTTCGCTTCAATATTTTTCGGTAAATCATTTTTTGCAGTCCATATTACAGTCA GGATTGCTCTAGTAATTAAGCACACGTTCTAAGTGCAGGCTAATCCTCCGCAGCTCCACT CAAATCTGTTGTACATACAAAGATATAGACGGCAAACAAGATTGGTGTCAGAGGCTCAAT ACTTTTTTACAAACATATTGTCTGCTGAGTCTTTCATATGGAACATTGATGGGGAATCAT TATCGATGAATGAATTGGATTTTCAAAGGAGAATGGATTCAGCAAGGGAACGCATGTTGG GGTTATCAGCTGACTCAGAATACCAGGATAATCAAGCCAATCCTGATGTCCAAGATCGTA CGTCACAAAGTCTTGGAGCTAACAGAAATTCTGATGCCAGTTTATCTTTGAAAGACCACG TCCAAGGTTCAGGGCAGGATATGAGAAGGGACAGTGATGTGACTGTGAGTGGTAAACAAG CTGAGCAGGTGCAATCTATTTCTGAATTAGAGAAGAAAGGAACTGCGGAGCTCCTCAATG AGGATGACTTGAACAAAAAATTCCAGGAGTACCCGTTTCTGTTTGCCCGTGCTGGTGATC TGACTATTGCTGATGTAGAGAGCCTATTGAATTCGTACAAGCATCTAGTACTTCGGTATG TAGCACTTGCACAAGGTATGGGTGTCAGTCCTGAAACCACTCTTACTCAGAACGGGCAGA CATCTGATCTTGTAGTATCTGAGGAGCCAGAAATTTTGAATAGCGTGGTAAAGGACAACG AGAACAGTGCAATAATTAACAAAAATGTTGATGATGTTATAAGCTTAAACCATCATTCAG AAGCAGTTGACACAGAAGCATCTGAACAAATGAACCAGAGAACTGCTGTTGATTCCAGTG ATGATCTGGAGGCATTGGGTCGGCCTGAGAATGCATGACCTGCTGGTTAAGCCAAGATGA AATGGCCATACATGGCAGAAGTACTCTGAAGTTTGTTCTTATACCTATAGACGACAATGA TCACAAAACAGAGTGCACATTTCCCTGAGTGATATGCAGCAGCTCCTCGAACCACAATTT TGTATGCTGGAGGCTTGAGCGTCAACATAGTGGAAATTAATCTACTCTGCCGAAGCTGTT CTTAGATCCAAATGTTCATTGCATTGAAGTTCCTGGACTCTTGGCTCTGTTGTAGGTCCA ATTTGTGGTGAACACACCCTTTCATGTTTTTAT