Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047854_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:143512901:143522010:1 gene:Zm00001d047854 gene_biotype:protein_coding transcript_biotype:protein_coding description:LAG1 longevity assurance homolog 2
Sequence

ATGAATAATGAGGCCAGGCAAGCAAAGATTGTCAAGTTCTCAGAGTCCATTTGGAAACTT
ACCTACTATGCTTCTGTTCAAGCATGGGTCCTCATGATAATAAAGCAGGAACCATGGTCA
TTGGATATGATGCAATACTTTGATGGCTGGCCGAACCAACCCATCGTGTCTTCATTGATG
CTTTTCTATATGTGCCAGTGTGGATTTTATATCTATAGCATCGGTGCTCTTGTTGCTTGG
GAAACCCGCAGAAAAGATTTTGCTGTAATGATGTCTCATCATGTAATAACATCTACTCTA
ATTGGAGTTTCATATCTGACTGGATTTTTCCGAATTGGGACCATCATTCTCGCTCTTCAT
GATGCAAGTGATGTGTTTCTTGAGACTGCCAAATTGTGCAAATACACAGAAAAAGAGCTG
GGTGCTAGCTTGTTTTTTGGTCTCTTCGCTATCTCCTGGCTTCTATTGCGTCTGATTTAC
TTCCCATTTTGGATAATCAAAGCCTCTAGCTATCATTCCATCACATTCTTGAGGAAGCTG
GATGAATTCCCAACAACTTTGTACTACATCTTGAACACAATGCTTCTCACATTGCTTGTA
TTCCATATGTACTGGTGGAAACTCATATGTTTGATGATAATGAGACAGCTGAATAATAAA
GGACAAGTTACAGACGATGTCCGATCTGATTCTGAGGATGAGGAGTAA

Peptide Sequence

PEP ID

Zm00001d047854_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:143512901:143522010:1 gene:Zm00001d047854 transcript:Zm00001d047854_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:LAG1 longevity assurance homolog 2
Sequence

MNNEARQAKIVKFSESIWKLTYYASVQAWVLMIIKQEPWSLDMMQYFDGWPNQPIVSSLM
LFYMCQCGFYIYSIGALVAWETRRKDFAVMMSHHVITSTLIGVSYLTGFFRIGTIILALH
DASDVFLETAKLCKYTEKELGASLFFGLFAISWLLLRLIYFPFWIIKASSYHSITFLRKL
DEFPTTLYYILNTMLLTLLVFHMYWWKLICLMIMRQLNNKGQVTDDVRSDSEDEE

Transcript Sequence

Transcript ID

Zm00001d047854_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:143512901:143522010:1 gene:Zm00001d047854 gene_biotype:protein_coding transcript_biotype:protein_coding description:LAG1 longevity assurance homolog 2
Sequence

ATCCCATAGCCCCGCTCACGCTGTCGCTGTCACGCACATCATCGTCCTCCTCCCTTCCCC
GCAGGCCCCCTCGCCTCGCGCGTGCGCCCCCCCTACCCCGTCTCCTCCCTGCCTGCGCGA
GCGACTAGTAGAAATAGGCGCGCGTGCCGCCTCGGCCGCTCGCTCCTCTGGTTAATCCCC
CCTCGCCACGACTCGCAGCCATCCCTTCACATTATCCGCGCGCGCGCGAGCGGACGTAGC
GTGTGGGTAGCGTCGCCGTGCGGACGGTCTCTTGGTGCCGGTGCGGGCCGCGTGACGGTG
CGTGTGCCGCCCGCGGGGAGGAGGTCGTTCGGTTGGTTGGCCCTCGGCGACGATGGCGGT
CCACGGCGGAGAGGCGGTCTCCGTCGCGCTCCTCTTCTCCCTCGCTTTCTTCTGCGCTCG
CCTCCTGCTCGACCGCCTCGTCTACAAGGTATACCCCCGTCCCGACACCGCCAGATTCGT
GCCGGGTTCCGCGAGATCTCTGGTCTCCCCGGTTTCGCTCCCACGCCCCAATGCCCCCCG
GTCGCGACTCGCGAGTGGCGACGCGGGCGCGGGGCGTGGTATCCGCCGCCGCTCGTTGCA
CCTTCCTTACCGATCAGCTGATTCCGCTCGTCCGGCGGGGGATCATCCGAGTGCGTGTGA
CGTAATGCTCCCGCCAGTCGTTAATTGCGTTACTGGTGGCTGGCTGGCCGCTACTCTGTT
AAGGACCAACGGCGCTGGTGCGGTTTGCAGTAGTATGTGCAGATGTGCTCGCAGTAGAGC
ATGGATCAATAACTTTGTCCTTATGCAAAGATTGTTCGTAATAGAACCTTGCACCTAACA
AGTCTACATCTGGCATGGCTTGCCAATTGCATGATATTTTCCTGAATTCCTGCAAGCCAG
CTATACGTCTTCCCTTTCTCTAGAAGGTTTGAGCCCAACAGAGGTGATGATGTAAATAAG
GTGGCAAGGTGATGTATGTACAAGTTTTTTTTCTATATAAGCACAGTGGTACTCATAAGC
TGTGCCAATATGCAACTCTTAATTATCTTGGCATTGGATCGCTTCTAAAATTTCAGTATG
AATAGTACCTTTTGATATCATATGGCAGTTTAACTACACATCTTAACGCTATGCTTTCCA
GCCATTAGCAGTCTACCTTTTCAACACCAAAGCTTCTAAGTTGATGAATAATGAGGCCAG
GCAAGCAAAGATTGTCAAGTTCTCAGAGTCCATTTGGAAACTTACCTACTATGCTTCTGT
TCAAGCATGGGTCCTCATGATAATAAAGCAGGAACCATGGTCATTGGATATGATGCAATA
CTTTGATGGCTGGCCGAACCAACCCATCGTGTCTTCATTGATGCTTTTCTATATGTGCCA
GTGTGGATTTTATATCTATAGCATCGGTGCTCTTGTTGCTTGGGAAACCCGCAGAAAAGA
TTTTGCTGTAATGATGTCTCATCATGTAATAACATCTACTCTAATTGGAGTTTCATATCT
GACTGGATTTTTCCGAATTGGGACCATCATTCTCGCTCTTCATGATGCAAGTGATGTGTT
TCTTGAGACTGCCAAATTGTGCAAATACACAGAAAAAGAGCTGGGTGCTAGCTTGTTTTT
TGGTCTCTTCGCTATCTCCTGGCTTCTATTGCGTCTGATTTACTTCCCATTTTGGATAAT
CAAAGCCTCTAGCTATCATTCCATCACATTCTTGAGGAAGCTGGATGAATTCCCAACAAC
TTTGTACTACATCTTGAACACAATGCTTCTCACATTGCTTGTATTCCATATGTACTGGTG
GAAACTCATATGTTTGATGATAATGAGACAGCTGAATAATAAAGGACAAGTTACAGACGA
TGTCCGATCTGATTCTGAGGATGAGGAGTAATGGGAGATTCATTCTTTGACATCTGCAAC
GTGGCATTTCCTCGTCAATACTTTTCTATGCCTGCTTCCAGAATTGATTGCTTTTAATCT
TGGCAAGTCTCGGGAACGTATAGGAAAGTTTAATCTCTGTATATTGCCTTATGATATCAA
ACATGGCTAGACCGGGAATGGATCTATACATGATGACGGGCATAGCTAGCAAGCTTACTT
CAAGGTTCCTTAAAAAATTTTGGTTCACCTTTATTTGATATGGGGAAAGACATGAGAGGG
TGTACAGCTTTTTCCTGAAGCTTGCAGAACCCCCCTCTGTACCATGATCAATATACTTCA
CTTGTGAGTAGATTTAGTTCTAATTGATGATAATAAATTGATTCTTTTGATTGGGAATGA
ATCTCACCT