Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047808_T019
CDS Infomation	cds chromosome:B73_RefGen_v4:9:142331991:142335614:-1 gene:Zm00001d047808 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:initiator binding protein1 description: initiator binding protein1
Sequence	ATGGTTTTCCAAAAGTGGTCGTCGTCGTCAGAGATGGAGTCGTGCGGTGGAGGCCAAGTC CCGGAGATGCCACGCGTTCCCAAGTCCGCGAGGGGCAAGAGATCGGTCAGGAAGAAGGAG GCCCAGAGCCCGGCCCAGATGTCTGCAATCGACCTTCTCGCAACCGTGGCAGGGAAGCTG TTTGACGAGGGGGCGGGGTCGCTGGGGAACACGAGCGCCGGTGCCCCGGCCTTGGCTGCG TTCGCAAAGGATGCCCTGGTGAAGCAGGAGCAGTGTGATGAGCAAATGAAGCTGTTCAAG CATGAGGCGACGGATCAGGATAGCTGCAATGAGAGTGCAATCCTCCCCCACATTGTGCTC CAGCGGGTGGTGAATAATGCTAGGAATGAGGATCCTAAGGCGAAGTCTGAGGTCCAGGAC AAGGAATCCTCCATGATCAGCTATACGAAGGCTGAATTGGGTTGTAATTTTGGTGTGATC GCAGACAGGTGGTCGCCTGAATCCGTGGAATCAGGAGCCTTCACAGGAGATGCAGTGGCG AGACTGATGATGACGGCCCCGGCAGGATTTCATAAGAATGCACCCGAAATGTATAGTTTG CTTGATTCAATGGATGTGGATGTCAAGCCGCCTCCTTTGGTCAGCTCTGACAGCACCGGC GAGATGCCATTGCATGGCGATAAAATTCACCGCTCAACCTCCTTACCGAGGGCCCCAAAG GGGGTGGGGTTTTTTGCTGTAGATAGAGATGATGACGACGACAAGTCCTCTGGGTGCACT CATCCGAGCACCGCCACTAACAAGGATTTCACATCCAATTGTAAAGCTGAGTATAATAGG GTAAGGAAGCTGCTCACTAGTAAGCACAGGAAAGTTGCTCCAGCGAGGATTCACAAATCT GATCTTTCCTATAGTGATGTCGAGCGGAAGCCTTCTTTCCGGTACAAAAAAATGCATACA CGACAGAGGACACAAAGGAGTACATTCAAGCGGAGGAAGCTCTTTGATCGCCATTTAGCT CTAGCATCTGAATTTGGTACAGCAAATGGAAAGGGAAACACAAAGGTTGCCGGAAGAAAC TCCAATGCTGTGTCTTTGGAAGCAAACAAGGGGACTAATTCAATGCCATTCCAGAAATCT TGTGGGTCAAATGATTGCCATGTGAAACTTAGAATTAAGTCTTTTAACGTGCCTGAACTT CTTGTTGAAATCCCAGACAGTGCAACTGTTGGCTCACTAAAGAAAACTGTTCTCGAGGCA GTGACTGCGATTCTTGGAGGTGGCCTACGTGTTGGTGTTCTTCACCATGGAAAGAAAGTC AGAGATGATAGTAAAACGTTAATTCAGGCTGGGATTGGTCAGGATGATATGCTGGACAAC CTTGGCTTTTCACTTGAACCCAACTGTACTCAAAACCCACAAGTACAAGCTCCTGAAGAT GTCAGTTTCCTCGAAAACATTGATACTACCGAACCCCTCGCAAGGATCACACCTGCTGAC TCGTCTTCTAAGCTTGGTGAAGTTGACGTATCACAGGAGCTTGCATTAACCCCATTAGCA ATGAACTACCAGGGCAGTGATCATGATTCCGTGCACTCCCCTGGGGCTGTCTCGTCGCGC GATAAAGACTCGCGAGCCTTATTTCTGGTTCCAGCTGCAGATCCCAATGCAGGAGCTGTA GTTCCAGCAAATAAGACTAAGAGGTCACCAGAGCAGGGACACCGCAGAATCAGGCGGCCG TTCTCTGTTGCTGAAGTAGAAGCACTTGTGCTCGCAGTCGAAAAGCTTGGAACCGGAAGG TGGCGAGATGTTAAACTTCGCGCTTTTGACAATGCAAAGCACCGTACCTACGTTGACCTT AAGGTAATAACTGCCAAGACAAATGGAAGACGCTGGTACACACAGCGAGCATCTCGCCGC AGCAGCGGCGTGGCGAGCCGGTGCCTCAGGAGCTGCTCGACCGGGTCCTGGCGGCCCAGG CCTACTGGTCCCAGCAGCAAGCCAAGCTCCAGCCTAAGACGCCCTCGCTGGCTGAGGCTC GCTTGCTCACCCAATAATTCGATGATCCCGGCTGATGGCCTCCTCTGA

Peptide Sequence

PEP ID	Zm00001d047808_P019
PEP Infomation	pep chromosome:B73_RefGen_v4:9:142331991:142335614:-1 gene:Zm00001d047808 transcript:Zm00001d047808_T019 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:initiator binding protein1 description: initiator binding protein1
Sequence	MVFQKWSSSSEMESCGGGQVPEMPRVPKSARGKRSVRKKEAQSPAQMSAIDLLATVAGKL FDEGAGSLGNTSAGAPALAAFAKDALVKQEQCDEQMKLFKHEATDQDSCNESAILPHIVL QRVVNNARNEDPKAKSEVQDKESSMISYTKAELGCNFGVIADRWSPESVESGAFTGDAVA RLMMTAPAGFHKNAPEMYSLLDSMDVDVKPPPLVSSDSTGEMPLHGDKIHRSTSLPRAPK GVGFFAVDRDDDDDKSSGCTHPSTATNKDFTSNCKAEYNRVRKLLTSKHRKVAPARIHKS DLSYSDVERKPSFRYKKMHTRQRTQRSTFKRRKLFDRHLALASEFGTANGKGNTKVAGRN SNAVSLEANKGTNSMPFQKSCGSNDCHVKLRIKSFNVPELLVEIPDSATVGSLKKTVLEA VTAILGGGLRVGVLHHGKKVRDDSKTLIQAGIGQDDMLDNLGFSLEPNCTQNPQVQAPED VSFLENIDTTEPLARITPADSSSKLGEVDVSQELALTPLAMNYQGSDHDSVHSPGAVSSR DKDSRALFLVPAADPNAGAVVPANKTKRSPEQGHRRIRRPFSVAEVEALVLAVEKLGTGR WRDVKLRAFDNAKHRTYVDLKVITAKTNGRRWYTQRASRRSSGVASRCLRSCSTGSWRPR PTGPSSKPSSSLRRPRWLRLACSPNNSMIPADGLL

Transcript Sequence

Transcript ID	Zm00001d047808_T019
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:142331991:142335614:-1 gene:Zm00001d047808 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:initiator binding protein1 description: initiator binding protein1
Sequence	AGATTTGGGTCGGGGACAAGCCATGAACAACGCAACCACCAGTTGTTAACTAACCCTCTT TTAAACTTCAAGCAACCAAAGCCAAGAGCAGAAATGGTTTTCCAAAAGTGGTCGTCGTCG TCAGAGATGGAGTCGTGCGGTGGAGGCCAAGTCCCGGAGATGCCACGCGTTCCCAAGTCC GCGAGGGGCAAGAGATCGGTCAGGAAGAAGGAGGCCCAGAGCCCGGCCCAGATGTCTGCA ATCGACCTTCTCGCAACCGTGGCAGGGAAGCTGTTTGACGAGGGGGCGGGGTCGCTGGGG AACACGAGCGCCGGTGCCCCGGCCTTGGCTGCGTTCGCAAAGGATGCCCTGGTGAAGCAG GAGCAGTGTGATGAGCAAATGAAGCTGTTCAAGCATGAGGCGACGGATCAGGATAGCTGC AATGAGAGTGCAATCCTCCCCCACATTGTGCTCCAGCGGGTGGTGAATAATGCTAGGAAT GAGGATCCTAAGGCGAAGTCTGAGGTCCAGGACAAGGAATCCTCCATGATCAGCTATACG AAGGCTGAATTGGGTTGTAATTTTGGTGTGATCGCAGACAGGTGGTCGCCTGAATCCGTG GAATCAGGAGCCTTCACAGGAGATGCAGTGGCGAGACTGATGATGACGGCCCCGGCAGGA TTTCATAAGAATGCACCCGAAATGTATAGTTTGCTTGATTCAATGGATGTGGATGTCAAG CCGCCTCCTTTGGTCAGCTCTGACAGCACCGGCGAGATGCCATTGCATGGCGATAAAATT CACCGCTCAACCTCCTTACCGAGGGCCCCAAAGGGGGTGGGGTTTTTTGCTGTAGATAGA GATGATGACGACGACAAGTCCTCTGGGTGCACTCATCCGAGCACCGCCACTAACAAGGAT TTCACATCCAATTGTAAAGCTGAGTATAATAGGGTAAGGAAGCTGCTCACTAGTAAGCAC AGGAAAGTTGCTCCAGCGAGGATTCACAAATCTGATCTTTCCTATAGTGATGTCGAGCGG AAGCCTTCTTTCCGGTACAAAAAAATGCATACACGACAGAGGACACAAAGGAGTACATTC AAGCGGAGGAAGCTCTTTGATCGCCATTTAGCTCTAGCATCTGAATTTGGTACAGCAAAT GGAAAGGGAAACACAAAGGTTGCCGGAAGAAACTCCAATGCTGTGTCTTTGGAAGCAAAC AAGGGGACTAATTCAATGCCATTCCAGAAATCTTGTGGGTCAAATGATTGCCATGTGAAA CTTAGAATTAAGTCTTTTAACGTGCCTGAACTTCTTGTTGAAATCCCAGACAGTGCAACT GTTGGCTCACTAAAGAAAACTGTTCTCGAGGCAGTGACTGCGATTCTTGGAGGTGGCCTA CGTGTTGGTGTTCTTCACCATGGAAAGAAAGTCAGAGATGATAGTAAAACGTTAATTCAG GCTGGGATTGGTCAGGATGATATGCTGGACAACCTTGGCTTTTCACTTGAACCCAACTGT ACTCAAAACCCACAAGTACAAGCTCCTGAAGATGTCAGTTTCCTCGAAAACATTGATACT ACCGAACCCCTCGCAAGGATCACACCTGCTGACTCGTCTTCTAAGCTTGGTGAAGTTGAC GTATCACAGGAGCTTGCATTAACCCCATTAGCAATGAACTACCAGGGCAGTGATCATGAT TCCGTGCACTCCCCTGGGGCTGTCTCGTCGCGCGATAAAGACTCGCGAGCCTTATTTCTG GTTCCAGCTGCAGATCCCAATGCAGGAGCTGTAGTTCCAGCAAATAAGACTAAGAGGTCA CCAGAGCAGGGACACCGCAGAATCAGGCGGCCGTTCTCTGTTGCTGAAGTAGAAGCACTT GTGCTCGCAGTCGAAAAGCTTGGAACCGGAAGGTGGCGAGATGTTAAACTTCGCGCTTTT GACAATGCAAAGCACCGTACCTACGTTGACCTTAAGGTAATAACTGCCAAGACAAATGGA AGACGCTGGTACACACAGCGAGCATCTCGCCGCAGCAGCGGCGTGGCGAGCCGGTGCCTC AGGAGCTGCTCGACCGGGTCCTGGCGGCCCAGGCCTACTGGTCCCAGCAGCAAGCCAAGC TCCAGCCTAAGACGCCCTCGCTGGCTGAGGCTCGCTTGCTCACCCAATAATTCGATGATC CCGGCTGATGGCCTCCTCTGAGGCCGTTGCAGCCTTTGTATAAAGTCAGTAAGTCCCTTC ACAGGAGGTTTAATGAAAATATAATATTAGGGGAAAAAAAGAATGCATATATAAGGTACA AGAAGCATTGACCGATTTGTTGTAATATCTACTCACCACCGGTTATTCTTTAAGCCAGGA TTCTCT