Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047807_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:142293225:142295467:-1 gene:Zm00001d047807 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence	ATGGGTAATGCCATCACCAAGAACCCATGCTTCTCCGGCGAACCGTACGCCGCCGCCGTC ACGTCGGACCCGCTCCCGGACGACAGCCATGGTCATTCCTTCACCTACGTGCCATCGGGC GGCGCCTTCGACCAGCCCCCGACGGCTGCCGCGACGTCGTCGGAGTCGTCGCTCTTCTCT CTGTCCGGCGCCGCCATCAGCGCCAATCTGGCGACGTCTGGGTCAATGCCGTCGTTCCGC ATGTTCAACGAGCTGACGTGGCCGCAGTCGACCGCGTGCACCTTCGAGAGCTCGCGATCC TTCGCCGCCGTGCCTCTCCTGGCGCCGCCGCGTACGCTGTCCATGTCGGGGCCGGTCCAG TTCACGTCCGGCCGTTTCTCCGAGGCATCCGGTTCCGCGTCCACCATCTCCGGCACGCCC TCGGGCCGTGCATTCATGTCAGGTCCATTTGACCGCTCCTCGTCCGCCTCCTCGTCCGCT GGGTTCCAACTGAGCGTTTCTCAGCTCATCGCTGAGCGCCACGCCGCGCGCTCTCGCCTC CGTGATGAGCGATCCCTGCTACGGTTCTTCGTCGGTACGGCCTCCAAACTCCGGCTCGGG TCGCCGCGCTGTGGCCGCCGGCCAGAGGAACCTGCTCAGGTCTCCTTCAGCGATGGGGAC TCCCGCTCCCCGCCGAACGGCAATGTGGAGTGGGCTCAGGGCATAGCCGGCGAGGACCGC TTCCACGTCGCGGTGTCCGAGGAGCATGGCTGGGTGTTCGTGGGGATTTACGACGGGTTC AACGGCCCCGACGCGACCGACTACCTCTTCACCAACCTCTACGTCGCCGTGCACAACGAG CTCAAAGGCGTGCTCTGGGACGACATTATCCAAGCCGGCGACAGCGCCAGGTGCGGCCAG GAAGATCATGCGGCGGCAGGCAATGCCGAACGCCTCCGTCTTGCTCAGGCCGACGGCGGC GGCGCGGAAGCGCCCACGCCAGGCAACAGCGCAGCATCAGTGCACCGCGACGTGCTGAGG GCGCTGGCGCGGGCGCTGAAGAAGACGGAGGAGGCGTTCTTCGCGGCGGCGGAGGAACGC GCGGCCGAGAGCCCGGAGCTGGGGCTGATGGGCTCCTGCGTGCTGGTCATGGTGATGAAG GGCACGGACGTCTACGTCATGAACGTCGGGGACAGCCGCGCCGTGCTGGCGCGGAGGCCG GAGCCCGACCTGAAGAACGTCCTCGGCAAGGCGTCGCAGGACCTGCAGCAGTTCAAGGCC GACATCGTGCGCGAGCTGGAGGCGCGCGAGGTGGACGGCCTGCAGGCCGTGCAGCTCACC CCAGAGCACAGCACCGCGGTCCAGGAGGAGGTGACGAGGATCAAGGGCCAGCATCTGAAT GACCGGAACGCCATAGTCAATGGCCGGGTCAAGGGGAAGATCAACGTCACCAGAGCGTTT GGGGTCGGCTACCTGAAGCAGCCCAAGTGGAACAGCAGGCTTCTGGAAGCCTTCAAGATC GACTACGTCGGCACGGACCCGTACGTGAGCTGCGCGCCGTCGCTGTGCCACCACCGCGTC GGGTCGCAGGACAAGTTCCTGGTGCTGTCCTCCGACGGGCTGTACCAGTACTTCACCAAC AAGGAGGTGGTGGACCAGGTGGTGGAGGCGCTCACCGCCGCGGAGCCCGACGGCGACCCC GCGCAGCACCTCGTCGGGGAGCTCGTGCACCGCGCCGCGAGGAAGGCCGGCATGGAGTCG CGCCAGCTGCTGGACATCCCGCGCGGCGAGAGGAGGCACTACCATGACGACGTCTCCATC ATCGTCATCTCGTTCGAGGGGCGGATCTGGAGGTCGTCTGTCTAG

Peptide Sequence

PEP ID	Zm00001d047807_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:142293225:142295467:-1 gene:Zm00001d047807 transcript:Zm00001d047807_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence	MGNAITKNPCFSGEPYAAAVTSDPLPDDSHGHSFTYVPSGGAFDQPPTAAATSSESSLFS LSGAAISANLATSGSMPSFRMFNELTWPQSTACTFESSRSFAAVPLLAPPRTLSMSGPVQ FTSGRFSEASGSASTISGTPSGRAFMSGPFDRSSSASSSAGFQLSVSQLIAERHAARSRL RDERSLLRFFVGTASKLRLGSPRCGRRPEEPAQVSFSDGDSRSPPNGNVEWAQGIAGEDR FHVAVSEEHGWVFVGIYDGFNGPDATDYLFTNLYVAVHNELKGVLWDDIIQAGDSARCGQ EDHAAAGNAERLRLAQADGGGAEAPTPGNSAASVHRDVLRALARALKKTEEAFFAAAEER AAESPELGLMGSCVLVMVMKGTDVYVMNVGDSRAVLARRPEPDLKNVLGKASQDLQQFKA DIVRELEAREVDGLQAVQLTPEHSTAVQEEVTRIKGQHLNDRNAIVNGRVKGKINVTRAF GVGYLKQPKWNSRLLEAFKIDYVGTDPYVSCAPSLCHHRVGSQDKFLVLSSDGLYQYFTN KEVVDQVVEALTAAEPDGDPAQHLVGELVHRAARKAGMESRQLLDIPRGERRHYHDDVSI IVISFEGRIWRSSV

Transcript Sequence

Transcript ID	Zm00001d047807_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:142293225:142295467:-1 gene:Zm00001d047807 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable protein phosphatase 2C 4
Sequence	AAGAAAACAAAATGGGTAATGCCATCACCAAGAACCCATGCTTCTCCGGCGAACCGTACG CCGCCGCCGTCACGTCGGACCCGCTCCCGGACGACAGCCATGGTCATTCCTTCACCTACG TGCCATCGGGCGGCGCCTTCGACCAGCCCCCGACGGCTGCCGCGACGTCGTCGGAGTCGT CGCTCTTCTCTCTGTCCGGCGCCGCCATCAGCGCCAATCTGGCGACGTCTGGGTCAATGC CGTCGTTCCGCATGTTCAACGAGCTGACGTGGCCGCAGTCGACCGCGTGCACCTTCGAGA GCTCGCGATCCTTCGCCGCCGTGCCTCTCCTGGCGCCGCCGCGTACGCTGTCCATGTCGG GGCCGGTCCAGTTCACGTCCGGCCGTTTCTCCGAGGCATCCGGTTCCGCGTCCACCATCT CCGGCACGCCCTCGGGCCGTGCATTCATGTCAGGTCCATTTGACCGCTCCTCGTCCGCCT CCTCGTCCGCTGGGTTCCAACTGAGCGTTTCTCAGCTCATCGCTGAGCGCCACGCCGCGC GCTCTCGCCTCCGTGATGAGCGATCCCTGCTACGGTTCTTCGTCGGTACGGCCTCCAAAC TCCGGCTCGGGTCGCCGCGCTGTGGCCGCCGGCCAGAGGAACCTGCTCAGGTCTCCTTCA GCGATGGGGACTCCCGCTCCCCGCCGAACGGCAATGTGGAGTGGGCTCAGGGCATAGCCG GCGAGGACCGCTTCCACGTCGCGGTGTCCGAGGAGCATGGCTGGGTGTTCGTGGGGATTT ACGACGGGTTCAACGGCCCCGACGCGACCGACTACCTCTTCACCAACCTCTACGTCGCCG TGCACAACGAGCTCAAAGGCGTGCTCTGGGACGACATTATCCAAGCCGGCGACAGCGCCA GGTGCGGCCAGGAAGATCATGCGGCGGCAGGCAATGCCGAACGCCTCCGTCTTGCTCAGG CCGACGGCGGCGGCGCGGAAGCGCCCACGCCAGGCAACAGCGCAGCATCAGTGCACCGCG ACGTGCTGAGGGCGCTGGCGCGGGCGCTGAAGAAGACGGAGGAGGCGTTCTTCGCGGCGG CGGAGGAACGCGCGGCCGAGAGCCCGGAGCTGGGGCTGATGGGCTCCTGCGTGCTGGTCA TGGTGATGAAGGGCACGGACGTCTACGTCATGAACGTCGGGGACAGCCGCGCCGTGCTGG CGCGGAGGCCGGAGCCCGACCTGAAGAACGTCCTCGGCAAGGCGTCGCAGGACCTGCAGC AGTTCAAGGCCGACATCGTGCGCGAGCTGGAGGCGCGCGAGGTGGACGGCCTGCAGGCCG TGCAGCTCACCCCAGAGCACAGCACCGCGGTCCAGGAGGAGGTGACGAGGATCAAGGGCC AGCATCTGAATGACCGGAACGCCATAGTCAATGGCCGGGTCAAGGGGAAGATCAACGTCA CCAGAGCGTTTGGGGTCGGCTACCTGAAGCAGCCCAAGTGGAACAGCAGGCTTCTGGAAG CCTTCAAGATCGACTACGTCGGCACGGACCCGTACGTGAGCTGCGCGCCGTCGCTGTGCC ACCACCGCGTCGGGTCGCAGGACAAGTTCCTGGTGCTGTCCTCCGACGGGCTGTACCAGT ACTTCACCAACAAGGAGGTGGTGGACCAGGTGGTGGAGGCGCTCACCGCCGCGGAGCCCG ACGGCGACCCCGCGCAGCACCTCGTCGGGGAGCTCGTGCACCGCGCCGCGAGGAAGGCCG GCATGGAGTCGCGCCAGCTGCTGGACATCCCGCGCGGCGAGAGGAGGCACTACCATGACG ACGTCTCCATCATCGTCATCTCGTTCGAGGGGCGGATCTGGAGGTCGTCTGTCTAGAGGC GTCTCGTG