Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047804_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:142203289:142205193:1 gene:Zm00001d047804 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative clathrin assembly protein

Sequence

ATGTCGTCGAGCACGATCCGGAAGGCCCTGGGCGCGGTGAAGGACCAGACCAGCATCAGC
CTCGCCAAGGTCACTAGCAACATCGCGCCCGATCTGGACGTGCTCATCGTCAAGGCCACC
AGCCACGACGACGAGCCGGCCGAGGAGCGCCACATCCGCGAGATCCTCCACCTTACGTCC
GGATCCCGCGCCCACGTTGCTGCTGCCGTGGCAGGGTGCTCCCGCAGGCTCTCCCGCACC
CGCGACTATGTGGTCGCGCTCAAGTCGCTCATGCTCGTGCACCGCCTCCTTGTCGATGGC
GACCCGTCCTTCCACCGCGAGCTCCTACATGGCACACGGCGGGGCACCCGCCTGCTGAAC
CTCTCTGATTTTCGGGACGAGGCGCACTCTGGATCGTGGGATCACTCTGCCTTTGTGCGC
ACCTATGCGCTCTACCTTGACCAGCGCCTCGAGTTCTTCCTCCATGAGCGCAAGCAGGGG
TTAAATGCTGGCAGCAGCAGCAGTGCTAATGGCCCATCACCACGGGACCGTGATCGCTGG
GGTTCGCCTGATCCCTATGGCCGCCGCTCTCCCTCCTACTCGTCACCCCCTGGGTATGGA
GGATATGATGATTACCGCGAGAGGAATGGTGGGAACAATGATGACAAGAGGCCACCGACC
CCGGTGAGGGATATGAAGCCTGAGCGTGTCCTTGCTCGTATGCACCACCTACAGCAGCTG
CTTGACAGGTTCCTTGCTTGCCGCCCCACTGGTGGTGCAAAGCAAAGCAGGATGGTGCTG
GTTGCGCTGTATCAGATTGTGAGAGAGAGCTTCCAGCTCTACTCTGATATCTGCGAGGTG
CTGGCGGTGCTGCTGGACAGGTTCTTTGACATGGAGTATGCGGAATGCGTGAAGGCTTTT
GAGGCATATGCTAGTGCTGCAAAGCAGATTGATGAGCTCTCTGCATTCTATTCATGGTGT
AAAGATACTGGAGTTGCAAGGTCATCTGAGTACCCAGAGGTGCAGCGTGTCACTGATAAG
TTGCTGGAGACGCTAGAAGAGTTCATGAGGGACCGGGCAAAGAGGCCTAAGAGCCCACCA
CGGGAGCCTGAACCTGAGCCTGTTAAGGAAGAACCTGAGCCGGATATGAACAGCATCAAA
GCGCTTCCAGCACCAGAAGATTATAAGGAGCCTGAACCTGTGAAGGTGGAGGAAGAGGTG
AAGCCGGAGCCACCCCCACAGCCACAGGGTGACTTGGTGGATCTCAGAGAAGATACTGTT
AGTGCAGATGAGCAAGGTAATAGGCTTGCTCTAGCACTCTTCCAGGGACCGCCCGCTGCT
GGTGGAAACAATGGTTCATGGGAGGCTTTCCCTTCAAATGGTGGCAACGAGGTGACTTCG
GCATGGCAGAATCCTGCAGCTGAACCTGGGAAGGCTGATTGGGAGCTTGCCCTCGTAGAG
ACAGCAAGCAACTTGTCCATGCAGAAGCCAGCAATGTCAGGTGGTATGGACCCGCTGCTG
CTGAATGGTATGTATGACCAGGGTGTTGTGCGTCAGCACGTTAGTGCACAGGTGACCACC
GGGAGTGCCAGCAGCGTCGCCCTGCCTGCTCCTGGACAGAAGACTCAGATGCTTGCTCTG
CCCGCACCGGATGGTTCAATGCAGACTGTTGGTGGTGACCCCTTTGCAGCGTCCCTTGCC
GTCCCACCACCATCCTATGTGCAGATGGCAGATTTGGAGAAGAAGCAACAGCTCTTGTCG
CAGGAGCAGATTATGTGGCAACAGTACCAGAGGGACGGCATGCAAGGGCAATCGAGCCTG
AACAAGCTCGACCAGGCTTACCACAATGGTTTCGCGCCCAACCCGGGCATGCCCTATGGG
ATGCCCGCGGCGTACAACACTGGGTATTACTACCCTACTTACTGA

Peptide Sequence

PEP ID

Zm00001d047804_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:142203289:142205193:1 gene:Zm00001d047804 transcript:Zm00001d047804_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative clathrin assembly protein

Sequence

MSSSTIRKALGAVKDQTSISLAKVTSNIAPDLDVLIVKATSHDDEPAEERHIREILHLTS
GSRAHVAAAVAGCSRRLSRTRDYVVALKSLMLVHRLLVDGDPSFHRELLHGTRRGTRLLN
LSDFRDEAHSGSWDHSAFVRTYALYLDQRLEFFLHERKQGLNAGSSSSANGPSPRDRDRW
GSPDPYGRRSPSYSSPPGYGGYDDYRERNGGNNDDKRPPTPVRDMKPERVLARMHHLQQL
LDRFLACRPTGGAKQSRMVLVALYQIVRESFQLYSDICEVLAVLLDRFFDMEYAECVKAF
EAYASAAKQIDELSAFYSWCKDTGVARSSEYPEVQRVTDKLLETLEEFMRDRAKRPKSPP
REPEPEPVKEEPEPDMNSIKALPAPEDYKEPEPVKVEEEVKPEPPPQPQGDLVDLREDTV
SADEQGNRLALALFQGPPAAGGNNGSWEAFPSNGGNEVTSAWQNPAAEPGKADWELALVE
TASNLSMQKPAMSGGMDPLLLNGMYDQGVVRQHVSAQVTTGSASSVALPAPGQKTQMLAL
PAPDGSMQTVGGDPFAASLAVPPPSYVQMADLEKKQQLLSQEQIMWQQYQRDGMQGQSSL
NKLDQAYHNGFAPNPGMPYGMPAAYNTGYYYPTY

Transcript Sequence

Transcript ID

Zm00001d047804_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:142203289:142205193:1 gene:Zm00001d047804 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative clathrin assembly protein

Sequence

ATGTCGTCGAGCACGATCCGGAAGGCCCTGGGCGCGGTGAAGGACCAGACCAGCATCAGC
CTCGCCAAGGTCACTAGCAACATCGCGCCCGATCTGGACGTGCTCATCGTCAAGGCCACC
AGCCACGACGACGAGCCGGCCGAGGAGCGCCACATCCGCGAGATCCTCCACCTTACGTCC
GGATCCCGCGCCCACGTTGCTGCTGCCGTGGCAGGGTGCTCCCGCAGGCTCTCCCGCACC
CGCGACTATGTGGTCGCGCTCAAGTCGCTCATGCTCGTGCACCGCCTCCTTGTCGATGGC
GACCCGTCCTTCCACCGCGAGCTCCTACATGGCACACGGCGGGGCACCCGCCTGCTGAAC
CTCTCTGATTTTCGGGACGAGGCGCACTCTGGATCGTGGGATCACTCTGCCTTTGTGCGC
ACCTATGCGCTCTACCTTGACCAGCGCCTCGAGTTCTTCCTCCATGAGCGCAAGCAGGGG
TTAAATGCTGGCAGCAGCAGCAGTGCTAATGGCCCATCACCACGGGACCGTGATCGCTGG
GGTTCGCCTGATCCCTATGGCCGCCGCTCTCCCTCCTACTCGTCACCCCCTGGGTATGGA
GGATATGATGATTACCGCGAGAGGAATGGTGGGAACAATGATGACAAGAGGCCACCGACC
CCGGTGAGGGATATGAAGCCTGAGCGTGTCCTTGCTCGTATGCACCACCTACAGCAGCTG
CTTGACAGGTTCCTTGCTTGCCGCCCCACTGGTGGTGCAAAGCAAAGCAGGATGGTGCTG
GTTGCGCTGTATCAGATTGTGAGAGAGAGCTTCCAGCTCTACTCTGATATCTGCGAGGTG
CTGGCGGTGCTGCTGGACAGGTTCTTTGACATGGAGTATGCGGAATGCGTGAAGGCTTTT
GAGGCATATGCTAGTGCTGCAAAGCAGATTGATGAGCTCTCTGCATTCTATTCATGGTGT
AAAGATACTGGAGTTGCAAGGTCATCTGAGTACCCAGAGGTGCAGCGTGTCACTGATAAG
TTGCTGGAGACGCTAGAAGAGTTCATGAGGGACCGGGCAAAGAGGCCTAAGAGCCCACCA
CGGGAGCCTGAACCTGAGCCTGTTAAGGAAGAACCTGAGCCGGATATGAACAGCATCAAA
GCGCTTCCAGCACCAGAAGATTATAAGGAGCCTGAACCTGTGAAGGTGGAGGAAGAGGTG
AAGCCGGAGCCACCCCCACAGCCACAGGGTGACTTGGTGGATCTCAGAGAAGATACTGTT
AGTGCAGATGAGCAAGGTAATAGGCTTGCTCTAGCACTCTTCCAGGGACCGCCCGCTGCT
GGTGGAAACAATGGTTCATGGGAGGCTTTCCCTTCAAATGGTGGCAACGAGGTGACTTCG
GCATGGCAGAATCCTGCAGCTGAACCTGGGAAGGCTGATTGGGAGCTTGCCCTCGTAGAG
ACAGCAAGCAACTTGTCCATGCAGAAGCCAGCAATGTCAGGTGGTATGGACCCGCTGCTG
CTGAATGGTATGTATGACCAGGGTGTTGTGCGTCAGCACGTTAGTGCACAGGTGACCACC
GGGAGTGCCAGCAGCGTCGCCCTGCCTGCTCCTGGACAGAAGACTCAGATGCTTGCTCTG
CCCGCACCGGATGGTTCAATGCAGACTGTTGGTGGTGACCCCTTTGCAGCGTCCCTTGCC
GTCCCACCACCATCCTATGTGCAGATGGCAGATTTGGAGAAGAAGCAACAGCTCTTGTCG
CAGGAGCAGATTATGTGGCAACAGTACCAGAGGGACGGCATGCAAGGGCAATCGAGCCTG
AACAAGCTCGACCAGGCTTACCACAATGGTTTCGCGCCCAACCCGGGCATGCCCTATGGG
ATGCCCGCGGCGTACAACACTGGGTATTACTACCCTACTTACTGA