Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047800_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:142110332:142111936:-1 gene:Zm00001d047800 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperones superfamily protein
Sequence	ATGGGCGAGTCGCTGCTCACCGCGCTCTCCATGGACACCACCACGGCCCACCATCCACAC CAGGGCCCTTTCACCTTCCTCTCCATGGACACCGCCTCCCACGACCACTTCGACCTCTTC CTCCCGCCACAGGGGCCCTTCCGCCGCTGCCTACATGCCGCGGCGGTCGCCCCCCCTGAC ATCAACCTCCCCCTCACCGCCGACCCGTCTCCGCCACCTCCGGCGTCGCACGACGCCAAC GTTGACGTGCTAGATGCCGGCCTCGGCGGCCCGCAGCACTACGACTCGGATTCGCCCGCT GCTGCCGGGCCTGTCTTGGCCCCAGCAGCAGCCGCGGCCACCGTGATCGCCGTGTCCCAC ACCAAGGGCTCCGGTTCCAGCGTGGCGCGCAAGTGCGTCAAGAGGAATGATAGCATTTGG GGAGCGTGGTTCTTCTTCACCCACTACTTCAAGCCAGTCATGTCCACCGACAAGGGTGGC AAGGCGAAGGCAGCCACCACCGGCGGGAATGGTAATAGTGCCAGTGCCACTCTGGACGCT TTCCTGGTGCAGCACGACATGGAGAACATGTACATGTGGATCTTTAAGGAGCGATCGGAG AATGCCCTGGGGAAGATGCAGCTGAGGAGCTTCATGAATGGGCACTCGCGCCTTGGGGAT CCACAGTTCCCTTTCAGCGCAGACAAAGGGTTTGTGCGCTCACACCGGATGCAGCGCAAG CATTATCGTGGGCTCTCTAACCCGCAGTGTATTCACGGGATCGAAATCGTGAGGGCGCCA AACTTGGCAGGTGTACCTGAGTCTGATTTAAAGAGGTGGATGGAGCTCACCGGGAGGGAT GCCAATTTCTCGATCCCAGCCGAGGCAAGTGATTTCGAGTCTTGGAGGAATCTGCCGAGC ACGGAATTTGAGCTCGAGAGGCTAGCAGCCGTGGTTCCTACAAAGAGTAGCTCACATGGG CACCACAAGAGGTTGCTGAACGGTTCTGGCCTTAACCTATCGACACAACCATCCAATCAC AGTTCTGGGGATGCCATGGAGATCGCAACCATCTGTAACAAGCGCAGGAAGGATTCCTCA CCGTCTGCAACGGAAGAGGACTGCAGCAATTCGAATTCAGACAAGGCCCAAGACATGGAT GTGAGCCACACCTTTGAGCCATCATGGATGAATGACTTCACAGGTGTGATGCGCCATGCT TCTGGACCAGTAACTGCCGCAAAAACAATATATGAGGACAGCAAGGGCTACTTGATCATT GTTAGCCTGCCTTTCTCTGATTTTCAGAAGGTGAAGGTTTCATGGAAGAATACTCTTACG AATGGGATTGTTAAGGTATCTTGCATTAGCGTTGGTAGGATGCCATTATTGAAAAGGCAT GATCGGACTTTCAAGTTGGCGGATCCTTCTCCTGAGCATTGCCCACCAGGAGAGTTTGTC CGGGAAATCCCACTGCCTACCCGGATCCCTGAAGATGCCACTCTGGAAGCATACCGCGAT GAAACGGGGACAGGCCTGGAGATTATTGTCCCAAAGTACCGTGTTGGCCCTGAAGAACAT GAGGTGCATGTGTCCATGAGACCGCCCTCGTCATGGTGCCAATGA

Peptide Sequence

PEP ID	Zm00001d047800_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:142110332:142111936:-1 gene:Zm00001d047800 transcript:Zm00001d047800_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperones superfamily protein
Sequence	MGESLLTALSMDTTTAHHPHQGPFTFLSMDTASHDHFDLFLPPQGPFRRCLHAAAVAPPD INLPLTADPSPPPPASHDANVDVLDAGLGGPQHYDSDSPAAAGPVLAPAAAAATVIAVSH TKGSGSSVARKCVKRNDSIWGAWFFFTHYFKPVMSTDKGGKAKAATTGGNGNSASATLDA FLVQHDMENMYMWIFKERSENALGKMQLRSFMNGHSRLGDPQFPFSADKGFVRSHRMQRK HYRGLSNPQCIHGIEIVRAPNLAGVPESDLKRWMELTGRDANFSIPAEASDFESWRNLPS TEFELERLAAVVPTKSSSHGHHKRLLNGSGLNLSTQPSNHSSGDAMEIATICNKRRKDSS PSATEEDCSNSNSDKAQDMDVSHTFEPSWMNDFTGVMRHASGPVTAAKTIYEDSKGYLII VSLPFSDFQKVKVSWKNTLTNGIVKVSCISVGRMPLLKRHDRTFKLADPSPEHCPPGEFV REIPLPTRIPEDATLEAYRDETGTGLEIIVPKYRVGPEEHEVHVSMRPPSSWCQ

Transcript Sequence

Transcript ID	Zm00001d047800_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:142110332:142111936:-1 gene:Zm00001d047800 gene_biotype:protein_coding transcript_biotype:protein_coding description:HSP20-like chaperones superfamily protein
Sequence	ATGGGCGAGTCGCTGCTCACCGCGCTCTCCATGGACACCACCACGGCCCACCATCCACAC CAGGGCCCTTTCACCTTCCTCTCCATGGACACCGCCTCCCACGACCACTTCGACCTCTTC CTCCCGCCACAGGGGCCCTTCCGCCGCTGCCTACATGCCGCGGCGGTCGCCCCCCCTGAC ATCAACCTCCCCCTCACCGCCGACCCGTCTCCGCCACCTCCGGCGTCGCACGACGCCAAC GTTGACGTGCTAGATGCCGGCCTCGGCGGCCCGCAGCACTACGACTCGGATTCGCCCGCT GCTGCCGGGCCTGTCTTGGCCCCAGCAGCAGCCGCGGCCACCGTGATCGCCGTGTCCCAC ACCAAGGGCTCCGGTTCCAGCGTGGCGCGCAAGTGCGTCAAGAGGAATGATAGCATTTGG GGAGCGTGGTTCTTCTTCACCCACTACTTCAAGCCAGTCATGTCCACCGACAAGGGTGGC AAGGCGAAGGCAGCCACCACCGGCGGGAATGGTAATAGTGCCAGTGCCACTCTGGACGCT TTCCTGGTGCAGCACGACATGGAGAACATGTACATGTGGATCTTTAAGGAGCGATCGGAG AATGCCCTGGGGAAGATGCAGCTGAGGAGCTTCATGAATGGGCACTCGCGCCTTGGGGAT CCACAGTTCCCTTTCAGCGCAGACAAAGGGTTTGTGCGCTCACACCGGATGCAGCGCAAG CATTATCGTGGGCTCTCTAACCCGCAGTGTATTCACGGGATCGAAATCGTGAGGGCGCCA AACTTGGCAGGTGTACCTGAGTCTGATTTAAAGAGGTGGATGGAGCTCACCGGGAGGGAT GCCAATTTCTCGATCCCAGCCGAGGCAAGTGATTTCGAGTCTTGGAGGAATCTGCCGAGC ACGGAATTTGAGCTCGAGAGGCTAGCAGCCGTGGTTCCTACAAAGAGTAGCTCACATGGG CACCACAAGAGGTTGCTGAACGGTTCTGGCCTTAACCTATCGACACAACCATCCAATCAC AGTTCTGGGGATGCCATGGAGATCGCAACCATCTGTAACAAGCGCAGGAAGGATTCCTCA CCGTCTGCAACGGAAGAGGACTGCAGCAATTCGAATTCAGACAAGGCCCAAGACATGGAT GTGAGCCACACCTTTGAGCCATCATGGATGAATGACTTCACAGGTGTGATGCGCCATGCT TCTGGACCAGTAACTGCCGCAAAAACAATATATGAGGACAGCAAGGGCTACTTGATCATT GTTAGCCTGCCTTTCTCTGATTTTCAGAAGGTGAAGGTTTCATGGAAGAATACTCTTACG AATGGGATTGTTAAGGTATCTTGCATTAGCGTTGGTAGGATGCCATTATTGAAAAGGCAT GATCGGACTTTCAAGTTGGCGGATCCTTCTCCTGAGCATTGCCCACCAGGAGAGTTTGTC CGGGAAATCCCACTGCCTACCCGGATCCCTGAAGATGCCACTCTGGAAGCATACCGCGAT GAAACGGGGACAGGCCTGGAGATTATTGTCCCAAAGTACCGTGTTGGCCCTGAAGAACAT GAGGTGCATGTGTCCATGAGACCGCCCTCGTCATGGTGCCAATGA