Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047796_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:9:141979586:141983345:-1 gene:Zm00001d047796 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trifunctional UDP-glucose 46-dehydratase/UDP-4-keto-6-deoxy-D-glucose 35-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2
Sequence	ATGGCGACTTATGAGCCCAAGAACATTCTCATAACTGGTGCTGCTGGTTTCATTGCATCG CATGTCGCCAACCGTCTGGTCAGGAACTATCCCCAATACAAGATCGTTGTCCTTGACAAG ATTGACTACTGCTCCAACCTAAAGAACCTCAATCCTTCACGGTCTTCACCAAATTTCAAA TTTGTCAAGGGTGATATTGCAAGTGCTGACCTGGTGAATTACCTTCTGATCACCGAGTCA ATTGACACCATCATGCACTTTGCTGCTCAGACGCATGTTGATAATTCTTTTGGCAATTCA TTTGAGTTCACAAAAAACAATATATATGGCACCCATGTTCTTCTTGAGGCTTGCAAGGTT ACTGGTCAGATCAGGAGGTTTATTCATGTCAGTACCGACGAGGTATATGGTGAAACTGAT GAAGATGCTGTGGTTGGTAACCATGAGGCCTCACAGCTGCTTCCAACAAATCCATATTCA GCTACAAAGGCTGGGGCTGAAATGCTTGTGATGGCATACGGAAGGTCTTATGGTCTTCCT GTGATTACCACTCGTGGCAACAATGTGTATGGGCCAAATCAATTTCCTGAGAAACTCATT CCCAAATTCATTCTTTTGGCCATGCAAGGTCTGCCTCTTCCAATTCATGGAGATGGCTCC AACGTCAGGAGCTACCTGTACTGTGAGGATGTGGCCGAAGCTTTTGAGGTGGTCCTTCAC AAAGGAGAAGTTGGACATGTGTATAATATTGGTACTGTGAAGGAGAGGAGGGTGATTGAT GTGGCCAAGGACATATGCAAGCTCTTTGGCTTGGATACTGAGAAAGTCATCAGGTTTGTT GAAAACAGGCCATTCAATGACCAGAGGTACTTCTTAGATGATCAGAAGCTAAAGAGATTG GGATGGGCAGAGCGCACACCATGGGAAGAGGGTTTGAAGAAGACGATGGAGTGGTACACC ACCAATCCTGATTACTGGGGAGATGTCACTGGTGCGCTGCTTCCTCATCCAAGGATGTTG ATGACTCCTGGAGTTGAAAGGCATAACTGGGCTGAAGAAATCAAGTCTCTGGCTTCTTCG CCAGCTGAAGCTAGTACAATAGCTCCAGCAACCAGTACCAAAAGCATCTCTGATGCCCCT CAGAAGCCTTCCTACAGGTTTTTAATCTATGGTAGGACTGGATGGATTGGTGGCCTCCTT GGAAAGATTTGTGAAAAGCAAGGGATACCATATGAGTATGGGAAAGGACGCTTGGAGGAG CGCTCTCAGCTGTTGGAGGACATTAGAAATGTGAAGCCAACTCATGTTTTCAATGCTGCC GGAGTCACTGGGAGACCAAATGTTGACTGGTGCGAGACCCATAAACAGGACACTATCCGC ACCAATGTTGTAGGCACTTTGAATCTAGCTGATGTCTGTCGCAAGCAGGGTCTGCTCATG ATTAATTATGCTACAGGCTGTATATTTGAGTATGATGCTAAGCACCCTGAAGGGTCTGGT ATTGGCTTTAAAGAGGAAGACACGCCCAACTTTATTGGTTCCTTTTATTCCAAAACAAAA GCAATGGTGGAAGAGCTATTGAAGGAGTATGATAATGTCTGTACTCTTAGGGTCAGGATG CCTATATCATCAGATCTAAGCAACCCCCGTAATTTCATCACAAAGATAGCTCGTTACGAC AAGGTGGTGAACATTCCCAACAGCATGACAATCTTGGATGAGCTTCTGCCTATCTCCATT GAGATGGCGAAACGGGACTGCAGGGGCATATGGAACTTCACCAACCCTGGCGCTGTAAGC CACAACGAGATTCTAGAGATGTACAAGAAATACATCAATCCTGATTTCAAGTGGACCAAC TTCACACTCGAAGAGCAGGCCAAGGTGATAGTCGCGCCTAGAAGCAACAACGAGATGGAC ACGTCGAAACTGAAGGCTGAGTTCCCTCAGCTTCTGTCCATCAAGGATTCTTTGATCAAG TACGTCTTTGAGCCCAACAGGAAGGTTCCTGTTAATTGA

Peptide Sequence

PEP ID	Zm00001d047796_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:9:141979586:141983345:-1 gene:Zm00001d047796 transcript:Zm00001d047796_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trifunctional UDP-glucose 46-dehydratase/UDP-4-keto-6-deoxy-D-glucose 35-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2
Sequence	MATYEPKNILITGAAGFIASHVANRLVRNYPQYKIVVLDKIDYCSNLKNLNPSRSSPNFK FVKGDIASADLVNYLLITESIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKV TGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLP VITTRGNNVYGPNQFPEKLIPKFILLAMQGLPLPIHGDGSNVRSYLYCEDVAEAFEVVLH KGEVGHVYNIGTVKERRVIDVAKDICKLFGLDTEKVIRFVENRPFNDQRYFLDDQKLKRL GWAERTPWEEGLKKTMEWYTTNPDYWGDVTGALLPHPRMLMTPGVERHNWAEEIKSLASS PAEASTIAPATSTKSISDAPQKPSYRFLIYGRTGWIGGLLGKICEKQGIPYEYGKGRLEE RSQLLEDIRNVKPTHVFNAAGVTGRPNVDWCETHKQDTIRTNVVGTLNLADVCRKQGLLM INYATGCIFEYDAKHPEGSGIGFKEEDTPNFIGSFYSKTKAMVEELLKEYDNVCTLRVRM PISSDLSNPRNFITKIARYDKVVNIPNSMTILDELLPISIEMAKRDCRGIWNFTNPGAVS HNEILEMYKKYINPDFKWTNFTLEEQAKVIVAPRSNNEMDTSKLKAEFPQLLSIKDSLIK YVFEPNRKVPVN

Transcript Sequence

Transcript ID	Zm00001d047796_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:141979586:141983345:-1 gene:Zm00001d047796 gene_biotype:protein_coding transcript_biotype:protein_coding description:Trifunctional UDP-glucose 46-dehydratase/UDP-4-keto-6-deoxy-D-glucose 35-epimerase/UDP-4-keto-L-rhamnose-reductase RHM2
Sequence	CGTTTATAGTCTCTAATAGTATCTTTTTAAATATTGTTCTAAATACAGTACAGTGTACAC TCTTTCGTCCTCATATATAGAGTTTCTTTTCTTGTTATCTATTTTTTATAATCTAGATAA TATATTACATAAAAAATATTTGAGAGTATGACGTGTTTATAAAAATTTAGAGTAAAACAT ATTTTTAATATAAATATTTCATATGTAGAACATTGTTGGAAAATAATATTTTTTAAAAAG AAACTGTAAAAGAAACAGAGGAAACAGAATAGGCATTGCCCGGGCCGCGTTTATAAGTCG CCAGACCCTCCCTCCCCGATCTCGCACTCTCCTCCCCCGCTCTCGACTTCCCACATCCCC TGCGGCCCCGCCCCCCGACTCTTCTCGTCGCGGCGCGCCCAATCGGCTCGGTGGCAGGCT AGTGCACCGGCTCGGCTCGGGTCCGGTTCTACCGCCAACGCGGGCCGCGGCGCTCCCGGA TCTCGGTCTAGTCAGAGAGTTAGCAGACAAAGATGGCGACTTATGAGCCCAAGAACATTC TCATAACTGGTGCTGCTGGTTTCATTGCATCGCATGTCGCCAACCGTCTGGTCAGGAACT ATCCCCAATACAAGATCGTTGTCCTTGACAAGATTGACTACTGCTCCAACCTAAAGAACC TCAATCCTTCACGGTCTTCACCAAATTTCAAATTTGTCAAGGGTGATATTGCAAGTGCTG ACCTGGTGAATTACCTTCTGATCACCGAGTCAATTGACACCATCATGCACTTTGCTGCTC AGACGCATGTTGATAATTCTTTTGGCAATTCATTTGAGTTCACAAAAAACAATATATATG GCACCCATGTTCTTCTTGAGGCTTGCAAGGTTACTGGTCAGATCAGGAGGTTTATTCATG TCAGTACCGACGAGGTATATGGTGAAACTGATGAAGATGCTGTGGTTGGTAACCATGAGG CCTCACAGCTGCTTCCAACAAATCCATATTCAGCTACAAAGGCTGGGGCTGAAATGCTTG TGATGGCATACGGAAGGTCTTATGGTCTTCCTGTGATTACCACTCGTGGCAACAATGTGT ATGGGCCAAATCAATTTCCTGAGAAACTCATTCCCAAATTCATTCTTTTGGCCATGCAAG GTCTGCCTCTTCCAATTCATGGAGATGGCTCCAACGTCAGGAGCTACCTGTACTGTGAGG ATGTGGCCGAAGCTTTTGAGGTGGTCCTTCACAAAGGAGAAGTTGGACATGTGTATAATA TTGGTACTGTGAAGGAGAGGAGGGTGATTGATGTGGCCAAGGACATATGCAAGCTCTTTG GCTTGGATACTGAGAAAGTCATCAGGTTTGTTGAAAACAGGCCATTCAATGACCAGAGGT ACTTCTTAGATGATCAGAAGCTAAAGAGATTGGGATGGGCAGAGCGCACACCATGGGAAG AGGGTTTGAAGAAGACGATGGAGTGGTACACCACCAATCCTGATTACTGGGGAGATGTCA CTGGTGCGCTGCTTCCTCATCCAAGGATGTTGATGACTCCTGGAGTTGAAAGGCATAACT GGGCTGAAGAAATCAAGTCTCTGGCTTCTTCGCCAGCTGAAGCTAGTACAATAGCTCCAG CAACCAGTACCAAAAGCATCTCTGATGCCCCTCAGAAGCCTTCCTACAGGTTTTTAATCT ATGGTAGGACTGGATGGATTGGTGGCCTCCTTGGAAAGATTTGTGAAAAGCAAGGGATAC CATATGAGTATGGGAAAGGACGCTTGGAGGAGCGCTCTCAGCTGTTGGAGGACATTAGAA ATGTGAAGCCAACTCATGTTTTCAATGCTGCCGGAGTCACTGGGAGACCAAATGTTGACT GGTGCGAGACCCATAAACAGGACACTATCCGCACCAATGTTGTAGGCACTTTGAATCTAG CTGATGTCTGTCGCAAGCAGGGTCTGCTCATGATTAATTATGCTACAGGCTGTATATTTG AGTATGATGCTAAGCACCCTGAAGGGTCTGGTATTGGCTTTAAAGAGGAAGACACGCCCA ACTTTATTGGTTCCTTTTATTCCAAAACAAAAGCAATGGTGGAAGAGCTATTGAAGGAGT ATGATAATGTCTGTACTCTTAGGGTCAGGATGCCTATATCATCAGATCTAAGCAACCCCC GTAATTTCATCACAAAGATAGCTCGTTACGACAAGGTGGTGAACATTCCCAACAGCATGA CAATCTTGGATGAGCTTCTGCCTATCTCCATTGAGATGGCGAAACGGGACTGCAGGGGCA TATGGAACTTCACCAACCCTGGCGCTGTAAGCCACAACGAGATTCTAGAGATGTACAAGA AATACATCAATCCTGATTTCAAGTGGACCAACTTCACACTCGAAGAGCAGGCCAAGGTGA TAGTCGCGCCTAGAAGCAACAACGAGATGGACACGTCGAAACTGAAGGCTGAGTTCCCTC AGCTTCTGTCCATCAAGGATTCTTTGATCAAGTACGTCTTTGAGCCCAACAGGAAGGTTC CTGTTAATTGAGGATTTACGTTGCGTGGATGCAGAGGTTATTTGTGTTGGTTATTGGACT CTAAATTAGCTAATGTTGCACCGTGGTGCGTACTAGTTGTGTTCGATTCTTTTGGGACAA TAGCAAGCATACCTCTTTCTGGTCGTCTATTATACACGCAATCTACAAACAGGTAGATAT TTAGATGTTCTTTTAGTGGCTGATACGAAGGCTTGGCCTGGTGAAGTGGTGAGAGCTTTC TTGCTGAGCCACTAGGTCATGCTTTCGAAGCAGTCTCTCCGTGTTTATGGTATAGTGGCT GATATGCTGAGACACGGTTATCGATGAACACTACGAATTGTCTTAATATATTATATATAT TAACTACCAAGAGCAGTTGTACATGGTCTTGTAAATTTTTATCCCTTCGTTGCAGTTGGC TCCAATTTTCCTGTTCTTGTTTTTTCTAT