Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047784_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:141746532:141748071:-1 gene:Zm00001d047784 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphoinositide binding
Sequence

ATGCCGCAGCGGCATTCGAAAAACAACAACGACCTCGCCTTCTTCACGTACGAGGAGAAG
CGGAAGCTCGGGTACGGCACGCAGCGGGAGCGCCTGGGAAAGGACTCCATCAAGCCCTTC
GACGCCTGCTGCCTCTGCCTCAAGCCGCTCATCGGCCCGCTCTGCTGCCCCAAGGGCCAC
ACATTCTGTAAGGAGTGCATCCTCGAGTGCCTCCTCTACCAGAAGAAGGACATCAAGCGC
AAGCTAGCAGCACATGAGGCCCAGAAAAGGCAAGAGAAAGAAGAGGAGGAGGAGAAGCTA
ATTCTGCAGAAGGCTAAGGAGTTGGATGCCTTTGATCAACAGAATCATGGAGCTGTTCCT
CAGTACCATGATCGCAGGGGTTCCCAAGACAAGAATGGGTTTCATGGAGCAAATAATGTG
AATGTCACTTCTTTTGAAGACGAAGCCCTTCGCTGTATGAAGGCATTCTGGCTCCCTTCA
GCTACTCCTGAAGCTACGGTCAAGGTAGACGTGCTCTCCACCGACACTGTCTGCCCGGAG
GGGCAGGAGAAGCTCAAGTTGAAATCGCTCTTCCCTATCTCGTTCACAGAGGAAACTGCT
GATCAGAAGAGCAGGAAGGCAGTGGAAAAGAGCTACATGTGCCCTAGTTGCAAGTCCACT
ATCACAAATACTATGTCCCTTGTGGCGGTCAGCACTTGTGGCCATGTCTTCTGCAAGAAA
TGTTCTGACAAGTTTCTAGTGAAGGATAAAGCTTGCTTGGAGTGCAGCAAACCATTCAGG
GAGAGGAATTTGGTTCCATTGGAGAAAGGAGCAACCGGGTTTGCTGCACATGATGAACGC
CTGGTTGCAAGGGATTTCAAGCATTTGGGTAGTGGCTCTGGGTTAGGACTAGTGAAGCCT
GCACCAAAAACTTACTAA

Peptide Sequence

PEP ID

Zm00001d047784_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:141746532:141748071:-1 gene:Zm00001d047784 transcript:Zm00001d047784_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphoinositide binding
Sequence

MPQRHSKNNNDLAFFTYEEKRKLGYGTQRERLGKDSIKPFDACCLCLKPLIGPLCCPKGH
TFCKECILECLLYQKKDIKRKLAAHEAQKRQEKEEEEEKLILQKAKELDAFDQQNHGAVP
QYHDRRGSQDKNGFHGANNVNVTSFEDEALRCMKAFWLPSATPEATVKVDVLSTDTVCPE
GQEKLKLKSLFPISFTEETADQKSRKAVEKSYMCPSCKSTITNTMSLVAVSTCGHVFCKK
CSDKFLVKDKACLECSKPFRERNLVPLEKGATGFAAHDERLVARDFKHLGSGSGLGLVKP
APKTY

Transcript Sequence

Transcript ID

Zm00001d047784_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:141746532:141748071:-1 gene:Zm00001d047784 gene_biotype:protein_coding transcript_biotype:protein_coding description:phosphoinositide binding
Sequence

TTGGGTTCCAAGCGAGCGAATACCTTCTCGAGCTAAGACGATTCGAGGCACGAGCGAAGA
TGCCGCAGCGGCATTCGAAAAACAACAACGACCTCGCCTTCTTCACGTACGAGGAGAAGC
GGAAGCTCGGGTACGGCACGCAGCGGGAGCGCCTGGGAAAGGACTCCATCAAGCCCTTCG
ACGCCTGCTGCCTCTGCCTCAAGCCGCTCATCGGCCCGCTCTGCTGCCCCAAGGGCCACA
CATTCTGTAAGGAGTGCATCCTCGAGTGCCTCCTCTACCAGAAGAAGGACATCAAGCGCA
AGCTAGCAGCACATGAGGCCCAGAAAAGGCAAGAGAAAGAAGAGGAGGAGGAGAAGCTAA
TTCTGCAGAAGGCTAAGGAGTTGGATGCCTTTGATCAACAGAATCATGGAGCTGTTCCTC
AGTACCATGATCGCAGGGGTTCCCAAGACAAGAATGGGTTTCATGGAGCAAATAATGTGA
ATGTCACTTCTTTTGAAGACGAAGCCCTTCGCTGTATGAAGGCATTCTGGCTCCCTTCAG
CTACTCCTGAAGCTACGGTCAAGGTAGACGTGCTCTCCACCGACACTGTCTGCCCGGAGG
GGCAGGAGAAGCTCAAGTTGAAATCGCTCTTCCCTATCTCGTTCACAGAGGAAACTGCTG
ATCAGAAGAGCAGGAAGGCAGTGGAAAAGAGCTACATGTGCCCTAGTTGCAAGTCCACTA
TCACAAATACTATGTCCCTTGTGGCGGTCAGCACTTGTGGCCATGTCTTCTGCAAGAAAT
GTTCTGACAAGTTTCTAGTGAAGGATAAAGCTTGCTTGGAGTGCAGCAAACCATTCAGGG
AGAGGAATTTGGTTCCATTGGAGAAAGGAGCAACCGGGTTTGCTGCACATGATGAACGCC
TGGTTGCAAGGGATTTCAAGCATTTGGGTAGTGGCTCTGGGTTAGGACTAGTGAAGCCTG
CACCAAAAACTTACTAACCTTGAATAATTATAGCCGATGTTGTGTATTGTTTACCATGGT
GTCATGAAATTATCTAACATGGAAAT