Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d047769_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:9:141363314:141368940:1 gene:Zm00001d047769 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium pump3 description: calcium pump3
Sequence	ATGGGTAAGGGCGGGCAGGACGAAGGCAACCGCCGGCGGGACGGATCCGCCGCCTCGGGG CCGGACCGCCCCGCGCCGGTCTTCCCGGCGTGGGCGCGCACCCCGAGCGAGTGCCTCGCG GAGCTGGGCGTCTCGGCGGACCGCGGCCTCAGCTCCGAGGAGGCGGCGGCGCGGCTGCAG CGACACGGGCCCAACGAGCTCGAGCGGCACGCGCCGCCGTCGGTCTGGAAGCTCGTCCTC GAGCAGTTTAACGACACGCTCGTGCGCATCCTGCTCCTGGCGGCCGTCGTCTCCTTCGTG CTCGCGCTCTACGACGGCGCAGAGGGCGGCGAGGTGGGGCTCACCGCCTTCGTCGAGCCG CTCGTCATCTTCCTTATCCTCATCGTCAACGCCGTCGTCGGCGTCTGGCAGGAGAGCAAC GCCGAGAAGGCGCTCGAGGCTCTCAAGGAGATTCAGTCGGAGCACGCAACCGTCAGGCGT GATGGGCGCTGGTCGCATGGCCTCCCCGCGCGCGACCTCGTCCCCGGGGACATCGTTGAG CTCCGGGTCGGGGACAAGGTTCCCGCGGACATGCGCGTGCTCCAGCTCATCAGCTCCACC CTCCGCGTCGAGCAGGGGTCTCTCACCGGCGAGACCGCCTCTGTTAACAAGACCAGCCAC AAGATCGAGCTGGAGGACACTGACATCCAGGGAAAGGAGTGCATGGTTTTTGCCGGTACC ACTGTTGTCAACGGCAGTGCTGTCTGTGTTGTGACGGGCACTGGCATGGCTACCGAAATT GGCAAGATCCATGCGCAGATCCAGGAGGCATCTCAGGAGGAGGACGACACGCCACTGAAG AAGAAGCTCAATGAGTTTGGTGAGGCGCTAACTGCCATAATCGGGGTGATCTGTGCCTTG GTCTGGCTCATCAACTTGAAGTATTTCCTTTCCTGGGAGTATGTGGACGGGTGGCCTACG AATTTCAAGTTCTCATTTGAGAAGTGCACGTATTACTTTGAGATTGCGGTGGCACTGGCC GTTGCAGCAATTCCAGAGGGTTTGCCTGCTGTGATCACCACGTGCTTGGCACTCGGTACA AGGAAGATGGCACAGAAGAATGCCCTTGTGAGGAAGCTGCCGAGTGTGGAGACATTGGGT TGTACAACTGTGATTTGCTCTGATAAGACCGGAACTTTGACCACGAACCAGATGTCAGCA GTGAAGCTTGTAGCAATTGGGAGGTGGCCTGATACACTTAGGAGCTTTAAGGTTGATGGA ACCACTTATGATCCGACTGATGGGAAGATACACGATTGGCCAAGCTTGAGCATGGATGAA AATCTCCAGATGATCGGAAAGATAGCTGCGGTTTGCAATGATGCAAGCATTGCCCACTCT GAGCATCAGTACGTTGCTACTGGGATGCCCACAGAAGCTGCTCTGAAGGTTTTGGTTGAG AAAATGGGGCTTCCTGGTGGTTATACTCCATCTCTTGATTCATCTGATTTGCTAAGGTGT TGTCAGTGGTGGAATAATGCTGCCAAGAGAGTAGCAACTCTGGAATTTGATCGCACCAGA AAGTCAATGGGAGTTATTGTGAAAGCAAACTCTGGGAAGAACTTGCTGCTTGTTAAGGGA GCAGTAGAAAATCTGCTAGAGAGATGTACCCACATTCAGTTGCTCGATGGATCTGTTGTG CTATTGGATGATGGTGCCAAGGCGCTCATATTATCTACACTCCGTGACATGTCTGCCAGT GCTTTGCGCTGCTTGGGTTTTGCTTACAAGGATGAATTGTCAGAATTTGCAACATATGAT GGTGAAGAACATGCAGCTCACAAGTATCTGCTTGATCCTTCATATTACTCATCCATAGAG AGTAATATGATCTTTTGTGGTTTTGTTGGTCTAAGGGATCCTCCACGAGAAGAAGTCCAC AAAGCAATTGAAGATTGCAGAGCTGCTGGGATACGTGTTATGGTGATAACAGGAGATAAC AAGGAAACAGCAGAGGCCATTTGTCGTGAGATTGGGGTTTTTGGCCCTCATGAAGATATC AGTTCAAAAAGCTTCACAGGGAAGGAATTCATGGGTCTTTCTGATAAAAAGGAGCTCTTA AGACAACAGGGTGGCCTTCTCTTCTCCAGGGCAGAGCCAAAACACAAGCAGGAGATAGTT AGACTGCTCAAAGAAGATGGTGAAGTGGTTGCAATGACTGGTGATGGGGTGAATGATGCA CCAGCTCTTAAACTGGCTGATATTGGAGTTGCAATGGGCATTACTGGAACTGAGGTTGCC AAAGAAGCTTCAGATATGGTACTTGCAGATGATAACTTTAGTACTATAGTCGCAGCAGTT GGTGAAGGGAGATCTATTTACAACAACATGAAGGCTTTTATTAGATATATGATCTCCTCA AACATCGGAGAGGTCGCGTCCATATTCCTGACATCGGCTTTGGGTATTCCAGAAGGTCTC ATCCCAGTGCAACTCCTATGGGTCAATCTAGTTACAGATGGCCCTCCAGCGACTGCTTTG GGGTTCAACCCGCCAGATAAAGATATCATGAAGAAACCTCCTCGAAGAAGTGATGACTCG TTGATCACTCCTTGGATCCTGTTTCGCTATATGGTTATTGGCCTTTATGTTGGGGTTGCA ACAGTGGGAATCTTCATCATCTGGTACACGCATGACAGTTTCCTGGGAATTGACCTGGCT AGTGATGGTCATACACTTGTATCGTACTCCCAGCTCTCAAACTGGGACAAGTGCTCCTCA TGGGAGGGCTTCAAGGTGTCACCATTCACCGCAGGAGCGAGGACATTCAGCTTCGATGCA AATCCATGCGATTACTTCCAGGGTGGCAAGATTAAAGCAACGACCCTCTCCCTGTCAGTC TTGGTGGCCATTGAGATGTTCAACTCACTGAATGCCCTGTCAGAGGACGGCAGCCTTGTG AGCATGCCACCATGGGTTAATCCGTGGCTTCTTCTGGCCATGTCGGTTTCTTTCGGGCTG CATTTCTTGATCCTCTACGTGCCTTTCCTCGCTCAAGTGTTTGGGATCGTGCCCCTCAGT TTGAACGAATGGCTCTTGGTGGTGGCAGTGGCCTTCCCCGTTGTGCTGATCGACGAGGTT CTCAAATTTGTGGGGCGGTGCCTGACAGCGCGTGCCCGGAAACAATCAGGGAAGAGGAAG GCAGAGTAG

Peptide Sequence

PEP ID	Zm00001d047769_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:9:141363314:141368940:1 gene:Zm00001d047769 transcript:Zm00001d047769_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium pump3 description: calcium pump3
Sequence	MGKGGQDEGNRRRDGSAASGPDRPAPVFPAWARTPSECLAELGVSADRGLSSEEAAARLQ RHGPNELERHAPPSVWKLVLEQFNDTLVRILLLAAVVSFVLALYDGAEGGEVGLTAFVEP LVIFLILIVNAVVGVWQESNAEKALEALKEIQSEHATVRRDGRWSHGLPARDLVPGDIVE LRVGDKVPADMRVLQLISSTLRVEQGSLTGETASVNKTSHKIELEDTDIQGKECMVFAGT TVVNGSAVCVVTGTGMATEIGKIHAQIQEASQEEDDTPLKKKLNEFGEALTAIIGVICAL VWLINLKYFLSWEYVDGWPTNFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGT RKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMSAVKLVAIGRWPDTLRSFKVDG TTYDPTDGKIHDWPSLSMDENLQMIGKIAAVCNDASIAHSEHQYVATGMPTEAALKVLVE KMGLPGGYTPSLDSSDLLRCCQWWNNAAKRVATLEFDRTRKSMGVIVKANSGKNLLLVKG AVENLLERCTHIQLLDGSVVLLDDGAKALILSTLRDMSASALRCLGFAYKDELSEFATYD GEEHAAHKYLLDPSYYSSIESNMIFCGFVGLRDPPREEVHKAIEDCRAAGIRVMVITGDN KETAEAICREIGVFGPHEDISSKSFTGKEFMGLSDKKELLRQQGGLLFSRAEPKHKQEIV RLLKEDGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVAKEASDMVLADDNFSTIVAAV GEGRSIYNNMKAFIRYMISSNIGEVASIFLTSALGIPEGLIPVQLLWVNLVTDGPPATAL GFNPPDKDIMKKPPRRSDDSLITPWILFRYMVIGLYVGVATVGIFIIWYTHDSFLGIDLA SDGHTLVSYSQLSNWDKCSSWEGFKVSPFTAGARTFSFDANPCDYFQGGKIKATTLSLSV LVAIEMFNSLNALSEDGSLVSMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQVFGIVPLS LNEWLLVVAVAFPVVLIDEVLKFVGRCLTARARKQSGKRKAE

Transcript Sequence

Transcript ID	Zm00001d047769_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:9:141363314:141368940:1 gene:Zm00001d047769 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcium pump3 description: calcium pump3
Sequence	ATATATATAAATAGAAAGAAAGGGTAGGAGAAGAAATGCTCCCCCCACCTCTCCAGGCCT CCACATTGCTTCTGCGCTGCGCCACCAATCGCCATCGCCTCGTTGCCCAGTCTCCGCGCC GCCGCCTCCTCCGCTCCCTCCCTCCCTCCCCTCTTCTAGGGTTTCCATCCCATGCGATCT CGCGGCCTTGGTGTTCCGGGACAGTAGGGACGCCTCCTCTCCGTTCGAATCAAGGGAGTC AGCGACCCAATGGGTAAGGGCGGGCAGGACGAAGGCAACCGCCGGCGGGACGGATCCGCC GCCTCGGGGCCGGACCGCCCCGCGCCGGTCTTCCCGGCGTGGGCGCGCACCCCGAGCGAG TGCCTCGCGGAGCTGGGCGTCTCGGCGGACCGCGGCCTCAGCTCCGAGGAGGCGGCGGCG CGGCTGCAGCGACACGGGCCCAACGAGCTCGAGCGGCACGCGCCGCCGTCGGTCTGGAAG CTCGTCCTCGAGCAGTTTAACGACACGCTCGTGCGCATCCTGCTCCTGGCGGCCGTCGTC TCCTTCGTGCTCGCGCTCTACGACGGCGCAGAGGGCGGCGAGGTGGGGCTCACCGCCTTC GTCGAGCCGCTCGTCATCTTCCTTATCCTCATCGTCAACGCCGTCGTCGGCGTCTGGCAG GAGAGCAACGCCGAGAAGGCGCTCGAGGCTCTCAAGGAGATTCAGTCGGAGCACGCAACC GTCAGGCGTGATGGGCGCTGGTCGCATGGCCTCCCCGCGCGCGACCTCGTCCCCGGGGAC ATCGTTGAGCTCCGGGTCGGGGACAAGGTTCCCGCGGACATGCGCGTGCTCCAGCTCATC AGCTCCACCCTCCGCGTCGAGCAGGGGTCTCTCACCGGCGAGACCGCCTCTGTTAACAAG ACCAGCCACAAGATCGAGCTGGAGGACACTGACATCCAGGGAAAGGAGTGCATGGTTTTT GCCGGTACCACTGTTGTCAACGGCAGTGCTGTCTGTGTTGTGACGGGCACTGGCATGGCT ACCGAAATTGGCAAGATCCATGCGCAGATCCAGGAGGCATCTCAGGAGGAGGACGACACG CCACTGAAGAAGAAGCTCAATGAGTTTGGTGAGGCGCTAACTGCCATAATCGGGGTGATC TGTGCCTTGGTCTGGCTCATCAACTTGAAGTATTTCCTTTCCTGGGAGTATGTGGACGGG TGGCCTACGAATTTCAAGTTCTCATTTGAGAAGTGCACGTATTACTTTGAGATTGCGGTG GCACTGGCCGTTGCAGCAATTCCAGAGGGTTTGCCTGCTGTGATCACCACGTGCTTGGCA CTCGGTACAAGGAAGATGGCACAGAAGAATGCCCTTGTGAGGAAGCTGCCGAGTGTGGAG ACATTGGGTTGTACAACTGTGATTTGCTCTGATAAGACCGGAACTTTGACCACGAACCAG ATGTCAGCAGTGAAGCTTGTAGCAATTGGGAGGTGGCCTGATACACTTAGGAGCTTTAAG GTTGATGGAACCACTTATGATCCGACTGATGGGAAGATACACGATTGGCCAAGCTTGAGC ATGGATGAAAATCTCCAGATGATCGGAAAGATAGCTGCGGTTTGCAATGATGCAAGCATT GCCCACTCTGAGCATCAGTACGTTGCTACTGGGATGCCCACAGAAGCTGCTCTGAAGGTT TTGGTTGAGAAAATGGGGCTTCCTGGTGGTTATACTCCATCTCTTGATTCATCTGATTTG CTAAGGTGTTGTCAGTGGTGGAATAATGCTGCCAAGAGAGTAGCAACTCTGGAATTTGAT CGCACCAGAAAGTCAATGGGAGTTATTGTGAAAGCAAACTCTGGGAAGAACTTGCTGCTT GTTAAGGGAGCAGTAGAAAATCTGCTAGAGAGATGTACCCACATTCAGTTGCTCGATGGA TCTGTTGTGCTATTGGATGATGGTGCCAAGGCGCTCATATTATCTACACTCCGTGACATG TCTGCCAGTGCTTTGCGCTGCTTGGGTTTTGCTTACAAGGATGAATTGTCAGAATTTGCA ACATATGATGGTGAAGAACATGCAGCTCACAAGTATCTGCTTGATCCTTCATATTACTCA TCCATAGAGAGTAATATGATCTTTTGTGGTTTTGTTGGTCTAAGGGATCCTCCACGAGAA GAAGTCCACAAAGCAATTGAAGATTGCAGAGCTGCTGGGATACGTGTTATGGTGATAACA GGAGATAACAAGGAAACAGCAGAGGCCATTTGTCGTGAGATTGGGGTTTTTGGCCCTCAT GAAGATATCAGTTCAAAAAGCTTCACAGGGAAGGAATTCATGGGTCTTTCTGATAAAAAG GAGCTCTTAAGACAACAGGGTGGCCTTCTCTTCTCCAGGGCAGAGCCAAAACACAAGCAG GAGATAGTTAGACTGCTCAAAGAAGATGGTGAAGTGGTTGCAATGACTGGTGATGGGGTG AATGATGCACCAGCTCTTAAACTGGCTGATATTGGAGTTGCAATGGGCATTACTGGAACT GAGGTTGCCAAAGAAGCTTCAGATATGGTACTTGCAGATGATAACTTTAGTACTATAGTC GCAGCAGTTGGTGAAGGGAGATCTATTTACAACAACATGAAGGCTTTTATTAGATATATG ATCTCCTCAAACATCGGAGAGGTCGCGTCCATATTCCTGACATCGGCTTTGGGTATTCCA GAAGGTCTCATCCCAGTGCAACTCCTATGGGTCAATCTAGTTACAGATGGCCCTCCAGCG ACTGCTTTGGGGTTCAACCCGCCAGATAAAGATATCATGAAGAAACCTCCTCGAAGAAGT GATGACTCGTTGATCACTCCTTGGATCCTGTTTCGCTATATGGTTATTGGCCTTTATGTT GGGGTTGCAACAGTGGGAATCTTCATCATCTGGTACACGCATGACAGTTTCCTGGGAATT GACCTGGCTAGTGATGGTCATACACTTGTATCGTACTCCCAGCTCTCAAACTGGGACAAG TGCTCCTCATGGGAGGGCTTCAAGGTGTCACCATTCACCGCAGGAGCGAGGACATTCAGC TTCGATGCAAATCCATGCGATTACTTCCAGGGTGGCAAGATTAAAGCAACGACCCTCTCC CTGTCAGTCTTGGTGGCCATTGAGATGTTCAACTCACTGAATGCCCTGTCAGAGGACGGC AGCCTTGTGAGCATGCCACCATGGGTTAATCCGTGGCTTCTTCTGGCCATGTCGGTTTCT TTCGGGCTGCATTTCTTGATCCTCTACGTGCCTTTCCTCGCTCAAGTGTTTGGGATCGTG CCCCTCAGTTTGAACGAATGGCTCTTGGTGGTGGCAGTGGCCTTCCCCGTTGTGCTGATC GACGAGGTTCTCAAATTTGTGGGGCGGTGCCTGACAGCGCGTGCCCGGAAACAATCAGGG AAGAGGAAGGCAGAGTAGATGCTAGTGATCATCGGTATTTAGAATCTGTAGTGCCACGGG GAATCGATATTCAATGTGACACCCCCATTGTTTTTGAGCTGCTAAGGGCTCTCGATCCTT TCAGAGTGTTTTAGGTTGGGAATATGACCGTGCATGACAGGCTAGGATACTCTATAGAAT TGGTAAGCATATCGCGTTGAACAACACTGCCTTTTGTTTTTCGTTGTAACAAATGCTGGT ACTGTGAACATGCTGGAGATACAACAATGGTTACCTGACGTTTTTTTCTCTCTGACGATG AGCAGCTATACATGCTACTGACCTACTGTTATGTTGCGAATCTTCTGTCTTCTGACATGT TGCTCAGTAATACGTTTTTTTGCACTTGTATGTGCGG