Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047759_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:9:141091142:141101090:1 gene:Zm00001d047759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence

ATGGCCTTGGCCATGACCTCCTCGTCCACGCAGCCACCGTCCCCTCACCACCGCCGCCGT
CGCCGCTCGCAACCTACCACCGCCACCCCCAATGCCAACTCCAAACCTAAACCCAAACCC
AGGGCCAAGGCGCTCCCCCTACTCTCCGACGTCGGCGTCGGCCGCGACCCCGCCGCCATC
AAGTACTACGCCCGCGTCGCATCTAACCTCGCGGGCGCCGGCCGCCTACGAGACTTCCTC
CTAGCCGCCGAGGGCCTCCGCGCAGCCGCGTGCAACGACCCCAGCTTCGCGGCCCGCATC
AGCGCCCGTCTCCTGTCGCGCGGCGTCGCCGCCGCTGTCCGCGAGCGCGGACTGCCCTTC
ATGCTCGAGTTCTTCCGAGACGCCGAGCGCGTGCGCGTGCCGGTAGTCGAGATGCTCGAC
GCCGACGCGTCCAACGCTGTCGCCGGCGCCTGCCGGATGTTGCTGGAGGAGCGACGAATG
GTGGAGTTCGTGGAGGTCGTCGAGGCGCTAGCTCGATATGGATTCTATGTTCAAGACATC
GTGAACCCCATGGATGTACTGAAAATATTTGTCAAGCAGCGTGACCCAGATATAGCTATA
AGGTATGCACGCATATTTCCTAGTTCCCAACTTTTACTCTGCAATACCATGGAAGCTTTT
GGAAAAAGAAAGGAGTTGAAAAATGCTTTATTGATCTTTGGAGCCCTTAAGAATCAGCTT
GGAGGCATCAATATGTTTGCATGCCGAAGTATAATAGATATATGTGGCCATTGTGGCTCT
TCTGTACAGGCTCGAATTATATTTGAGGGGCTGCTTGCTGATAAGATTACTCCAAATACC
TATGTCTTCAACAGCCTAATGAATGTTAATGCCCATAGCTTGAGCTACAACTTTTCAGTC
TACAAGCATATGCAAAATCTTGGTGTCCCTCCTGATTTGACTTCATATAATATTCTTCTC
AAGACATGCTGCAGTGTCAGAGAATTCAACTTGGCTCAAGAAATTTATGAGGAAATGAAG
AAAAAGGAACGTGATGGCCTTTTAAAGCTAGATGTTTTCACATATAGTACAATGATGAAG
GTGTTTGCAGATGCAAAAATGTGGAAGATGGCTTCCAACATCAAAGAGGATATGCAAGCA
AACGGGGTTCGTCTTAACCTAGTAACATGGTCATCGTTAATCAATGCTTATGCAAATTCT
GGTCTGGTTGATCGTGCAATAGAGATCCTCAAAGAAATGATAAGGGATGGCTGCCAACCT
ACTGCCCCATGCTTCAATATTATCCTTACTGCATGTGTCAAGTCATGCCAATATGATAGA
GCTTTCCGCTTGTTCTACAGTTGGAAGGAGTCTGGTATCAAGATCTCTCTATCCTCTGAA
CAGAAGAGAGTTATTGATGGTGGCTTTACATTCTGTAAAGAGTATCCTAATAATGACAGT
ACTATATTGGTGGTTCCATTCAGGCCAACAGTCACAACCTATAACATCTTAATGAAGGCT
TGTGGTACTAATGCAGAACGTGCAAAGTCTACCATGAACGAAATGAGGCGGAATGGCCTT
TGTCCTGATCTTATTAGCTGGTCTATACTCATAGATATTTATGGATCTTCTCAAAATAGG
GATGGAGCTGTTCAGGCACTAAGGAGAATGCAGCGAGTTGGGATGAGACTTAATGTCTCT
GCATATACTGTTGCTATTAAGGCGTGTGTTGAAAACAAAGATTTGAAGTTAGCACTGCAC
TTATTTGAAGAAATGAAAACACACCAACTGAAGCCCAATTTGGTGACGTACAAAACTCTC
CTGGCAGCACGCATCAATTATGGATCACTACAGGAGGTCCAACAGTGTTTAGCGATATAT
CAGGAGATGAGGAAAGCAGGGTTTCAGGCAAATGATTATTATCTCAAGGAATTAATAGTG
GAATGGTGTGAAGGAGTTCTGTCTAGTCGCAGTGATAATCAAGATTTTTACAATTTGGAT
CTACAACCTGAGACTGAGAGGAAAGAATCGTTCAACCTGTTTCTTGAGAAAGTCGTAACA
GTCTTGCAAAAAGATACTGATCAGAACCAAATTGTCGATGTTCGTGGCCTTTCAAAGGTT
GAAGCTCGAATTGTTGTTCTCTCTGTCCTTCGGAAGATCAAAGAGCAATACCTCCTAGGA
AGAGTGGTCCAGGATGATGTGGTTATCATCACGGGTCATGAGAAGACATCAACAACTGAA
GCTGAAACCACAACTAGTGCAGTTGACGTCGTGCAGGCAATAGTTACTGTTTTGACGGAT
GATCTGGGTCTTGAAGTTTTGATTGGACCTGGAAGCTGCCCTCCCGTTTCATCAAAACCC
AAAGCACCGACTAAATCTAGAAGTAATTTAGAGCAAATATCCAAAGAATTTACTAGGAGA
CCACAGGGAATGATAAAAATCCCTATCAACTCACTTAACCATTGGTTAAGGAAGAAAGCC
GTGAGGATTGCAGAGTGA

Peptide Sequence

PEP ID

Zm00001d047759_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:9:141091142:141101090:1 gene:Zm00001d047759 transcript:Zm00001d047759_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence

MALAMTSSSTQPPSPHHRRRRRSQPTTATPNANSKPKPKPRAKALPLLSDVGVGRDPAAI
KYYARVASNLAGAGRLRDFLLAAEGLRAAACNDPSFAARISARLLSRGVAAAVRERGLPF
MLEFFRDAERVRVPVVEMLDADASNAVAGACRMLLEERRMVEFVEVVEALARYGFYVQDI
VNPMDVLKIFVKQRDPDIAIRYARIFPSSQLLLCNTMEAFGKRKELKNALLIFGALKNQL
GGINMFACRSIIDICGHCGSSVQARIIFEGLLADKITPNTYVFNSLMNVNAHSLSYNFSV
YKHMQNLGVPPDLTSYNILLKTCCSVREFNLAQEIYEEMKKKERDGLLKLDVFTYSTMMK
VFADAKMWKMASNIKEDMQANGVRLNLVTWSSLINAYANSGLVDRAIEILKEMIRDGCQP
TAPCFNIILTACVKSCQYDRAFRLFYSWKESGIKISLSSEQKRVIDGGFTFCKEYPNNDS
TILVVPFRPTVTTYNILMKACGTNAERAKSTMNEMRRNGLCPDLISWSILIDIYGSSQNR
DGAVQALRRMQRVGMRLNVSAYTVAIKACVENKDLKLALHLFEEMKTHQLKPNLVTYKTL
LAARINYGSLQEVQQCLAIYQEMRKAGFQANDYYLKELIVEWCEGVLSSRSDNQDFYNLD
LQPETERKESFNLFLEKVVTVLQKDTDQNQIVDVRGLSKVEARIVVLSVLRKIKEQYLLG
RVVQDDVVIITGHEKTSTTEAETTTSAVDVVQAIVTVLTDDLGLEVLIGPGSCPPVSSKP
KAPTKSRSNLEQISKEFTRRPQGMIKIPINSLNHWLRKKAVRIAE

Transcript Sequence

Transcript ID

Zm00001d047759_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:141091142:141101090:1 gene:Zm00001d047759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein chloroplastic
Sequence

GTAGCTTCCATCTCCACTCCCACAGTCCCGCTCCCCCGCCATGGCCTTGGCCATGACCTC
CTCGTCCACGCAGCCACCGTCCCCTCACCACCGCCGCCGTCGCCGCTCGCAACCTACCAC
CGCCACCCCCAATGCCAACTCCAAACCTAAACCCAAACCCAGGGCCAAGGCGCTCCCCCT
ACTCTCCGACGTCGGCGTCGGCCGCGACCCCGCCGCCATCAAGTACTACGCCCGCGTCGC
ATCTAACCTCGCGGGCGCCGGCCGCCTACGAGACTTCCTCCTAGCCGCCGAGGGCCTCCG
CGCAGCCGCGTGCAACGACCCCAGCTTCGCGGCCCGCATCAGCGCCCGTCTCCTGTCGCG
CGGCGTCGCCGCCGCTGTCCGCGAGCGCGGACTGCCCTTCATGCTCGAGTTCTTCCGAGA
CGCCGAGCGCGTGCGCGTGCCGGTAGTCGAGATGCTCGACGCCGACGCGTCCAACGCTGT
CGCCGGCGCCTGCCGGATGTTGCTGGAGGAGCGACGAATGGTGGAGTTCGTGGAGGTCGT
CGAGGCGCTAGCTCGATATGGATTCTATGTTCAAGACATCGTGAACCCCATGGATGTACT
GAAAATATTTGTCAAGCAGCGTGACCCAGATATAGCTATAAGGTATGCACGCATATTTCC
TAGTTCCCAACTTTTACTCTGCAATACCATGGAAGCTTTTGGAAAAAGAAAGGAGTTGAA
AAATGCTTTATTGATCTTTGGAGCCCTTAAGAATCAGCTTGGAGGCATCAATATGTTTGC
ATGCCGAAGTATAATAGATATATGTGGCCATTGTGGCTCTTCTGTACAGGCTCGAATTAT
ATTTGAGGGGCTGCTTGCTGATAAGATTACTCCAAATACCTATGTCTTCAACAGCCTAAT
GAATGTTAATGCCCATAGCTTGAGCTACAACTTTTCAGTCTACAAGCATATGCAAAATCT
TGGTGTCCCTCCTGATTTGACTTCATATAATATTCTTCTCAAGACATGCTGCAGTGTCAG
AGAATTCAACTTGGCTCAAGAAATTTATGAGGAAATGAAGAAAAAGGAACGTGATGGCCT
TTTAAAGCTAGATGTTTTCACATATAGTACAATGATGAAGGTGTTTGCAGATGCAAAAAT
GTGGAAGATGGCTTCCAACATCAAAGAGGATATGCAAGCAAACGGGGTTCGTCTTAACCT
AGTAACATGGTCATCGTTAATCAATGCTTATGCAAATTCTGGTCTGGTTGATCGTGCAAT
AGAGATCCTCAAAGAAATGATAAGGGATGGCTGCCAACCTACTGCCCCATGCTTCAATAT
TATCCTTACTGCATGTGTCAAGTCATGCCAATATGATAGAGCTTTCCGCTTGTTCTACAG
TTGGAAGGAGTCTGGTATCAAGATCTCTCTATCCTCTGAACAGAAGAGAGTTATTGATGG
TGGCTTTACATTCTGTAAAGAGTATCCTAATAATGACAGTACTATATTGGTGGTTCCATT
CAGGCCAACAGTCACAACCTATAACATCTTAATGAAGGCTTGTGGTACTAATGCAGAACG
TGCAAAGTCTACCATGAACGAAATGAGGCGGAATGGCCTTTGTCCTGATCTTATTAGCTG
GTCTATACTCATAGATATTTATGGATCTTCTCAAAATAGGGATGGAGCTGTTCAGGCACT
AAGGAGAATGCAGCGAGTTGGGATGAGACTTAATGTCTCTGCATATACTGTTGCTATTAA
GGCGTGTGTTGAAAACAAAGATTTGAAGTTAGCACTGCACTTATTTGAAGAAATGAAAAC
ACACCAACTGAAGCCCAATTTGGTGACGTACAAAACTCTCCTGGCAGCACGCATCAATTA
TGGATCACTACAGGAGGTCCAACAGTGTTTAGCGATATATCAGGAGATGAGGAAAGCAGG
GTTTCAGGCAAATGATTATTATCTCAAGGAATTAATAGTGGAATGGTGTGAAGGAGTTCT
GTCTAGTCGCAGTGATAATCAAGATTTTTACAATTTGGATCTACAACCTGAGACTGAGAG
GAAAGAATCGTTCAACCTGTTTCTTGAGAAAGTCGTAACAGTCTTGCAAAAAGATACTGA
TCAGAACCAAATTGTCGATGTTCGTGGCCTTTCAAAGGTTGAAGCTCGAATTGTTGTTCT
CTCTGTCCTTCGGAAGATCAAAGAGCAATACCTCCTAGGAAGAGTGGTCCAGGATGATGT
GGTTATCATCACGGGTCATGAGAAGACATCAACAACTGAAGCTGAAACCACAACTAGTGC
AGTTGACGTCGTGCAGGCAATAGTTACTGTTTTGACGGATGATCTGGGTCTTGAAGTTTT
GATTGGACCTGGAAGCTGCCCTCCCGTTTCATCAAAACCCAAAGCACCGACTAAATCTAG
AAGTAATTTAGAGCAAATATCCAAAGAATTTACTAGGAGACCACAGGGAATGATAAAAAT
CCCTATCAACTCACTTAACCATTGGTTAAGGAAGAAAGCCGTGAGGATTGCAGAGTGACA
TTTCCTTAAAGGCTTAAACTACCTTTTTGGTCCATTTAGTATACCAGTAAATCAGCACAG
CTATTCCAGGATTGGGTGTACATATGAAAACAGGTTACTGCTCCTGGTATTCCAGGCACA
CTGACACGACTTGAAAAGGGACTTGTTGGCAGGCAATAAACTGTGCTTCTGTGTTGATT