Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047755_T013
CDS Infomation

cds chromosome:B73_RefGen_v4:9:140918426:140925966:-1 gene:Zm00001d047755 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arogenate dehydratase/prephenate dehydratase 2 chloroplastic
Sequence

ATGGCGCCCACGACTTGCCTCCGGATCCCCTTCCTCCCCGCCCGAGGCCGCTCCGCTAAC
GTCAACGCCCCTCCGTCCTGGCTCCCCCGCCGCCTTTCTCTCAAATCCAGCGCGACCAAC
GGTGACAATTCCCTCCCCAATCCCATCTCCACCTCTCCCACCTCGCCGCCTTGGTTAACG
GTGGTGGACGTTAACGGGTTGCGTCGCCCGCCCGCGCCTGTTTCCGCCCCTACCATCCCC
GGCGACCGCGGTCCCCGGTGGCTGCCTCGGCCGTTCACTAGCGCGGACGTCATGGGGGCG
GATTGGAAGGGGCTCAAGGTTGCTTACCAGGGTTGCGCTGGGGCGTACAGCGAAGCGGCA
GCAAAGAAGGCATACCCAAATTGTGAGGCTGTGCCCTGTGAGCACTTTGACACTGCATTT
CAGGCTGTTCAAAACTGGGTAGTTGATAGGGCAGTGCTGCCACTTGAGAATTCATTGGGA
GGTAGCATACATCGGAACTATGATCTATTGGTTCAGCATAGTTTGCACATTGTCGGAGAA
GTTCGCCTTGAGGTTCACCATTGCTTGTTAGCCAATCCTGGTGTGAAGATTGAAAATCTG
AAAAGTGTTATGAGCCATCCCCAGGCTCTTGCGCAATGTGAACACACATTAACAGGACTA
GGAATTGAACATAGAGAGGCTGTTGACGACACTGCTGGTGCAGCAAAGATTGTTGCAGAA
CATATGGTCCAGGATACTGGTGCTATTGCTAGTTCATTGGCTGCTAAACTCTATGGATTG
GATGTTCTTGCTGAGAATATTCAGGATGGCAAAAATAATGTCACCCGTTTTATGATGCTA
GCTCGAAAACCCAACATTCTTCGCAATGATAGACCATTTAAGACAAGCATAGTCTTTTCA
CTAGAAGAAGGACATGGACAACTCTTTAGGGCGCTTGGTGTATTCGCACAGAGGAAAATC
AACCTCACAAAGATCGAAAGTCGTCCACACAAGGAGAGGCCTCTTCGAGTATCTGATGAC
TGTTCCTCACTCTTAAAGAATTTTGATTACCTCTTTTACGTTGACCTTGAAGCATCAATG
GCTGATCCAAAGATTCAGAATGCTCTTGGAAATCTGAAGGAGTTTGCAACCTTTTTAAGA
GTCCTCGGAAGCTATCCTACAAATGTGAATGAACCTTAG

Peptide Sequence

PEP ID

Zm00001d047755_P013
PEP Infomation

pep chromosome:B73_RefGen_v4:9:140918426:140925966:-1 gene:Zm00001d047755 transcript:Zm00001d047755_T013 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arogenate dehydratase/prephenate dehydratase 2 chloroplastic
Sequence

MAPTTCLRIPFLPARGRSANVNAPPSWLPRRLSLKSSATNGDNSLPNPISTSPTSPPWLT
VVDVNGLRRPPAPVSAPTIPGDRGPRWLPRPFTSADVMGADWKGLKVAYQGCAGAYSEAA
AKKAYPNCEAVPCEHFDTAFQAVQNWVVDRAVLPLENSLGGSIHRNYDLLVQHSLHIVGE
VRLEVHHCLLANPGVKIENLKSVMSHPQALAQCEHTLTGLGIEHREAVDDTAGAAKIVAE
HMVQDTGAIASSLAAKLYGLDVLAENIQDGKNNVTRFMMLARKPNILRNDRPFKTSIVFS
LEEGHGQLFRALGVFAQRKINLTKIESRPHKERPLRVSDDCSSLLKNFDYLFYVDLEASM
ADPKIQNALGNLKEFATFLRVLGSYPTNVNEP

Transcript Sequence

Transcript ID

Zm00001d047755_T013
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:140918426:140925966:-1 gene:Zm00001d047755 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arogenate dehydratase/prephenate dehydratase 2 chloroplastic
Sequence

GGTGGCCGGTGGCAATGGCGCCCACGACTTGCCTCCGGATCCCCTTCCTCCCCGCCCGAG
GCCGCTCCGCTAACGTCAACGCCCCTCCGTCCTGGCTCCCCCGCCGCCTTTCTCTCAAAT
CCAGCGCGACCAACGGTGACAATTCCCTCCCCAATCCCATCTCCACCTCTCCCACCTCGC
CGCCTTGGTTAACGGTGGTGGACGTTAACGGGTTGCGTCGCCCGCCCGCGCCTGTTTCCG
CCCCTACCATCCCCGGCGACCGCGGTCCCCGGTGGCTGCCTCGGCCGTTCACTAGCGCGG
ACGTCATGGGGGCGGATTGGAAGGGGCTCAAGGTTGCTTACCAGGGTTGCGCTGGGGCGT
ACAGCGAAGCGGCAGCAAAGAAGGCATACCCAAATTGTGAGGCTGTGCCCTGTGAGCACT
TTGACACTGCATTTCAGGCTGTTCAAAACTGGGTAGTTGATAGGGCAGTGCTGCCACTTG
AGAATTCATTGGGAGGTAGCATACATCGGAACTATGATCTATTGGTTCAGCATAGTTTGC
ACATTGTCGGAGAAGTTCGCCTTGAGGTTCACCATTGCTTGTTAGCCAATCCTGGTGTGA
AGATTGAAAATCTGAAAAGTGTTATGAGCCATCCCCAGGCTCTTGCGCAATGTGAACACA
CATTAACAGGACTAGGAATTGAACATAGAGAGGCTGTTGACGACACTGCTGGTGCAGCAA
AGATTGTTGCAGAACATATGGTCCAGGATACTGGTGCTATTGCTAGTTCATTGGCTGCTA
AACTCTATGGATTGGATGTTCTTGCTGAGAATATTCAGGATGGCAAAAATAATGTCACCC
GTTTTATGATGCTAGCTCGAAAACCCAACATTCTTCGCAATGATAGACCATTTAAGACAA
GCATAGTCTTTTCACTAGAAGAAGGACATGGACAACTCTTTAGGGCGCTTGGTGTATTCG
CACAGAGGAAAATCAACCTCACAAAGATCGAAAGTCGTCCACACAAGGAGAGGCCTCTTC
GAGTATCTGATGACTGTTCCTCACTCTTAAAGAATTTTGATTACCTCTTTTACGTTGACC
TTGAAGCATCAATGGCTGATCCAAAGATTCAGAATGCTCTTGGAAATCTGAAGGAGTTTG
CAACCTTTTTAAGAGTCCTCGGAAGCTATCCTACAAATGTGAATGAACCTTAGAAAACAC
TGCAGATTACATGATGCAGGAATGGACGAAATGGTTTGAGTTGGTTCTCTGAGCAGGTTG
ACAAGTGAGGACCTCTATGAAGCTGATGCTAACATTTACAGAGCAAAAGGATCTATATTA
GAGCAGTATAGAAGGGTGGATGTGAGGCTTACATTGGTTGTGAGCTTGAAAGGGAATTTG
TTGTTTGGCTGGTGAGGTTCTTTTGACTTCTGATGCAACGAGGATAGCTGAAATAGCAAT
CTTCTTCAATGTCTTATTATGCGGGAGCTTGAAAATACTTCAATTTATAAGTTTATAGGT
TTTCATGTTGGAGCATCTTTGTCATGGTAGCATGTAGGTTGCTAAAATAGTCAGTGGAAT
AATGAGACAATGTCTAAGAACACTTGTCTTTTTTTTAGGACAGTATAATAAGAACTGACG
TTTCCAT