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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047753_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:140907239:140909664:1 gene:Zm00001d047753 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable RNA-binding protein ARP1
Sequence

ATGACGATGATGGCGCCTCATCCGCAGCCACTGCCGCTGGCACAGCCGCCGGCGTTCGGG
GACACCACGCTCACCAAGGTGTTCGTGGGCGGCCTGGCGTGGGAGACCCACGAGGGCGCC
CTCCGCGGGCACTTCCAGCGCTACGGCGACATCCTCGAGGCCGTCATCATCTCCGACAAG
CTCACCGGCCGCTCCAAGGGCTACGGCTTCGTGACGTTCAAGGAGGCGGACGCAGCCAAG
AAGGCGTGCGAGGATGCCACCCCCGTCATCAACGGCCGTCGCGCCAACTGCAACCTCGCC
TCCCTCGGCGCCAAGCCGAGGCCCCAGCCGCTGCAGCACGTCCTCCGTCCCTCGCCCCCG
CACGCGCACGCGCTTCCCTCTCCTCACCAGCCCACGCCAGCCATCGCGGTGGGATCCAGG
AGCGTGTCGCCGGTGCCATGGTACTACCACCCCTCCACGACGCGCCCTCCGCCGCCGCCG
GCCGCGCACCAGCAGTACCACGGCGTGCTCCCGTTCTACCCCGCCGCCGCCACCTACGGG
TACTCCCCGAACTACGTCACGGACCTGAGCTACAATACGAAGGTAGGCCAAGCGGCAGCT
GCCGGCACGGCGGCCGGGTCCTACCTACAGCTACAGGGGCACTTGGCGTACCAGGCGGCG
CCAGCTCAGGGCGGCATGGTGCCGGTGTACCCGTTCTACCACTACCCGTACCACGCCTCG
CACTCGCAGGGCCTGGGCGTCCCCGCCGCGCACTTCCTCCCCCCGGTCTCCGCCGCCGCC
GTCGTCTCCTCCAAGCCCACCGTCGTGGCCACTCCCAAAGCAGTGGAGTGGAGCGGGTGA

Peptide Sequence

PEP ID

Zm00001d047753_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:140907239:140909664:1 gene:Zm00001d047753 transcript:Zm00001d047753_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable RNA-binding protein ARP1
Sequence

MTMMAPHPQPLPLAQPPAFGDTTLTKVFVGGLAWETHEGALRGHFQRYGDILEAVIISDK
LTGRSKGYGFVTFKEADAAKKACEDATPVINGRRANCNLASLGAKPRPQPLQHVLRPSPP
HAHALPSPHQPTPAIAVGSRSVSPVPWYYHPSTTRPPPPPAAHQQYHGVLPFYPAAATYG
YSPNYVTDLSYNTKVGQAAAAGTAAGSYLQLQGHLAYQAAPAQGGMVPVYPFYHYPYHAS
HSQGLGVPAAHFLPPVSAAAVVSSKPTVVATPKAVEWSG

Transcript Sequence

Transcript ID

Zm00001d047753_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:140907239:140909664:1 gene:Zm00001d047753 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable RNA-binding protein ARP1
Sequence

CCTCTCCGTCTGCGTTCCTGTCGTGGCCCACATCTAGCCGTCGTCGTCGTCAAGAAAGGA
GGCGCCACAATGACGATGATGGCGCCTCATCCGCAGCCACTGCCGCTGGCACAGCCGCCG
GCGTTCGGGGACACCACGCTCACCAAGGTGTTCGTGGGCGGCCTGGCGTGGGAGACCCAC
GAGGGCGCCCTCCGCGGGCACTTCCAGCGCTACGGCGACATCCTCGAGGCCGTCATCATC
TCCGACAAGCTCACCGGCCGCTCCAAGGGCTACGGCTTCGTGACGTTCAAGGAGGCGGAC
GCAGCCAAGAAGGCGTGCGAGGATGCCACCCCCGTCATCAACGGCCGTCGCGCCAACTGC
AACCTCGCCTCCCTCGGCGCCAAGCCGAGGCCCCAGCCGCTGCAGCACGTCCTCCGTCCC
TCGCCCCCGCACGCGCACGCGCTTCCCTCTCCTCACCAGCCCACGCCAGCCATCGCGGTG
GGATCCAGGAGCGTGTCGCCGGTGCCATGGTACTACCACCCCTCCACGACGCGCCCTCCG
CCGCCGCCGGCCGCGCACCAGCAGTACCACGGCGTGCTCCCGTTCTACCCCGCCGCCGCC
ACCTACGGGTACTCCCCGAACTACGTCACGGACCTGAGCTACAATACGAAGGTAGGCCAA
GCGGCAGCTGCCGGCACGGCGGCCGGGTCCTACCTACAGCTACAGGGGCACTTGGCGTAC
CAGGCGGCGCCAGCTCAGGGCGGCATGGTGCCGGTGTACCCGTTCTACCACTACCCGTAC
CACGCCTCGCACTCGCAGGGCCTGGGCGTCCCCGCCGCGCACTTCCTCCCCCCGGTCTCC
GCCGCCGCCGTCGTCTCCTCCAAGCCCACCGTCGTGGCCACTCCCAAAGCAGTGGAGTGG
AGCGGGTGACGGGTTGCAGCTGAAGGCACGAGGCGATGGTGGTGGTGGCGGCGGCGACTA
TGGGCGGCGCAATGAAAGGCGCTCTGCTCTGTTAACAAGCTGCACATGAAGGGTGTCGGA
TGCCGAAGCGACGCAAGGCCGCATTAGTTACATTCATTCAATTCCCTCTAACTTCGACCA
CAGTACCGGCAACAACAGTCTGTAACAAACAAATGACTGGATTCGTCTCTCGTTTACCTC
TGTATTTTTCCAATGGTAAACCCGTTTATCAGTGTCTGTAGTGTAGTAGTCCGATCGCTG
CAGGTGACAGCGGACCTCAATAAACCGTCATAGTATTTCGCCCTATTCTATGGTCGAAAT
ATCTCAGTTAAAAAGT