Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d047749_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:9:140823447:140828462:-1 gene:Zm00001d047749 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

ATGACGTGGCACGAGGACCTGGCCACTCACGTGGGGAACACGGGCGTTCGCCTCCCCGGC
GCCGGAGGTCACGCGCCGGCGGCGGCGAATGTTGCTGCGGCGGGGGCCGGGTGGTACGGG
GAGGAGGAAGAGGGGAGGGCGGAGGAGGGGTGGGCGCAGCAGGCGAAGGGGTTCGCGGAG
TCGACGGCGGAGATGCTGCGGGAGCTGGGCCGGGGGCTGTGGGACGTCGCCGCGCAGAGC
CTCGCCGGCGCCGAGGACAGCGAGGTGGCGCGGCGGCTCCGGAAGCGGGCGGCGGCTACG
GGGAAGCGCCTCAGCTTCATGAACGAGTACCTCCCCGAGGAGCGCGACCCGGTGAGGTGT
TGGCTCACCGTCGCCGCAGTCGCATTCGTCTCGCTCCTAGTTTTAGGTTTTGGGAGTGGC
AATGAAACTCCAGTAGAGCTTCCAAAGAAACTTATCATCGGCCCCCCAAGTGCTGATAGA
ATCCAACTTCCTGATGGACGGCATCTGGCTTATCAAGAACAAGGAGTTTCAGCTAACAGA
GCAAGATTTTCACTGATTTATCCTCATTCTTTTCTTTCATCAAGGCTAGCAGGAATCCCT
GGAATTAGAGCATCTCTTCTGGAAGAATTTGGAGTACGACTTGTGACCTATGATCTTCCT
GGTTTTGGTGAGAGCGATCCACACATAGGCCGGAATCTCAATTCTTCTGCAATGGACATG
CTCTATCTGGCTAATGCTCTCAATATTCCGGAGAAGTTCTGGGTTGTGGGCTATTCTGGA
GGTGGAATGCATGCCTGGAGTGCTCTTCGTTACATTCCTGATCGCATTGCTGGTGCAGCA
ATGTTCGCACCTATGGCAAATCCATATGACTCCAAGATGACCAAAGATGAGAGGCGTAAA
ACATGGGATAGCTGGTCAACGAAACGGAAACTGATGCACATTTTAGCTCGGAGGTTTCCA
TCACTACTACCATTCTTTTATCGCCAAACCTTTCTTTCTGGAAAGCAAGGACATCCAGAG
AGTTGGTTGTCGCTGTCATTGGGGAAGAAGGACAAAACTTTACTGGAAGGTCCTGCGTTC
AATGCATTCTGGGAAAGGAATGTTGCAGAGTCTGTGCGCCAGGGAGATGCAAGGCCATTT
GTGGAGGAAGCTGTGCTGCAAGTATCTGACTGGGGTTTCAGCCTATCTGACATCCAAATG
CAGAAGAAAGAGGCTCGAGGCTTTTTTGAACTCATCAAGTCTCTCTTCAATCAGGCTGAA
AGAGAGTGGGTGGGATTTCTGGGCCCAATACATATATGGCAGGGGATGGATGACCGAGTG
ATCTCGCCGTCAGTGGCTGAATTTGTGCGGCGGTTGGTTCCAGGAGCCACGGTCCACAAG
CTTCTTGATGAAGGTCACTTCTCATACTTCTGCTTCTGTGACGAGTGCCACAGGCAGATA
TTCTCCACCCTCTTCGGCATTCCCCAGGGCCCTATGAACCCTGCACCGCAACCCAGCGAG
GTCGTTTCAGAGCTCAACGAAGAAATAACAGTACCAGACAATGTCACAGATCAGGAACAA
GGAAAATCAGGCCTGCCCTGA

Peptide Sequence

PEP ID

Zm00001d047749_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:9:140823447:140828462:-1 gene:Zm00001d047749 transcript:Zm00001d047749_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

MTWHEDLATHVGNTGVRLPGAGGHAPAAANVAAAGAGWYGEEEEGRAEEGWAQQAKGFAE
STAEMLRELGRGLWDVAAQSLAGAEDSEVARRLRKRAAATGKRLSFMNEYLPEERDPVRC
WLTVAAVAFVSLLVLGFGSGNETPVELPKKLIIGPPSADRIQLPDGRHLAYQEQGVSANR
ARFSLIYPHSFLSSRLAGIPGIRASLLEEFGVRLVTYDLPGFGESDPHIGRNLNSSAMDM
LYLANALNIPEKFWVVGYSGGGMHAWSALRYIPDRIAGAAMFAPMANPYDSKMTKDERRK
TWDSWSTKRKLMHILARRFPSLLPFFYRQTFLSGKQGHPESWLSLSLGKKDKTLLEGPAF
NAFWERNVAESVRQGDARPFVEEAVLQVSDWGFSLSDIQMQKKEARGFFELIKSLFNQAE
REWVGFLGPIHIWQGMDDRVISPSVAEFVRRLVPGATVHKLLDEGHFSYFCFCDECHRQI
FSTLFGIPQGPMNPAPQPSEVVSELNEEITVPDNVTDQEQGKSGLP

Transcript Sequence

Transcript ID

Zm00001d047749_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:9:140823447:140828462:-1 gene:Zm00001d047749 gene_biotype:protein_coding transcript_biotype:protein_coding description:alpha/beta-Hydrolases superfamily protein
Sequence

CCGTGGACGCTCGTGGTCGTGGGGAAGAAAGCAACCCGGGCCCGGAACCACCAAAGCCAG
AGACACCCACCAGAAACTCCTAGACTCCTAGTACAGTTTTACCCACACAGCCTAGCGGGA
CCTACAAGTCAGCCAAACGTCTCAAGCTCGCCATTTCGCCTCGGTTTCCAGCTCCCACTC
CTCCCTTCCTCGCTTCCCAATCTCCAAACCTCTCACTTGCACGGGAGCACGTACAGCCGT
ACAGGCGGAGCCAAAGCGATCGGCGCCGCGGCGGCAAGACGTCGTCGGCGGCGACGATGA
CGTGGCACGAGGACCTGGCCACTCACGTGGGGAACACGGGCGTTCGCCTCCCCGGCGCCG
GAGGTCACGCGCCGGCGGCGGCGAATGTTGCTGCGGCGGGGGCCGGGTGGTACGGGGAGG
AGGAAGAGGGGAGGGCGGAGGAGGGGTGGGCGCAGCAGGCGAAGGGGTTCGCGGAGTCGA
CGGCGGAGATGCTGCGGGAGCTGGGCCGGGGGCTGTGGGACGTCGCCGCGCAGAGCCTCG
CCGGCGCCGAGGACAGCGAGGTGGCGCGGCGGCTCCGGAAGCGGGCGGCGGCTACGGGGA
AGCGCCTCAGCTTCATGAACGAGTACCTCCCCGAGGAGCGCGACCCGGTGAGGTGTTGGC
TCACCGTCGCCGCAGTCGCATTCGTCTCGCTCCTAGTTTTAGGTTTTGGGAGTGGCAATG
AAACTCCAGTAGAGCTTCCAAAGAAACTTATCATCGGCCCCCCAAGTGCTGATAGAATCC
AACTTCCTGATGGACGGCATCTGGCTTATCAAGAACAAGGAGTTTCAGCTAACAGAGCAA
GATTTTCACTGATTTATCCTCATTCTTTTCTTTCATCAAGGCTAGCAGGAATCCCTGGAA
TTAGAGCATCTCTTCTGGAAGAATTTGGAGTACGACTTGTGACCTATGATCTTCCTGGTT
TTGGTGAGAGCGATCCACACATAGGCCGGAATCTCAATTCTTCTGCAATGGACATGCTCT
ATCTGGCTAATGCTCTCAATATTCCGGAGAAGTTCTGGGTTGTGGGCTATTCTGGAGGTG
GAATGCATGCCTGGAGTGCTCTTCGTTACATTCCTGATCGCATTGCTGGTGCAGCAATGT
TCGCACCTATGGCAAATCCATATGACTCCAAGATGACCAAAGATGAGAGGCGTAAAACAT
GGGATAGCTGGTCAACGAAACGGAAACTGATGCACATTTTAGCTCGGAGGTTTCCATCAC
TACTACCATTCTTTTATCGCCAAACCTTTCTTTCTGGAAAGCAAGGACATCCAGAGAGTT
GGTTGTCGCTGTCATTGGGGAAGAAGGACAAAACTTTACTGGAAGGTCCTGCGTTCAATG
CATTCTGGGAAAGGAATGTTGCAGAGTCTGTGCGCCAGGGAGATGCAAGGCCATTTGTGG
AGGAAGCTGTGCTGCAAGTATCTGACTGGGGTTTCAGCCTATCTGACATCCAAATGCAGA
AGAAAGAGGCTCGAGGCTTTTTTGAACTCATCAAGTCTCTCTTCAATCAGGCTGAAAGAG
AGTGGGTGGGATTTCTGGGCCCAATACATATATGGCAGGGGATGGATGACCGAGTGATCT
CGCCGTCAGTGGCTGAATTTGTGCGGCGGTTGGTTCCAGGAGCCACGGTCCACAAGCTTC
TTGATGAAGGTCACTTCTCATACTTCTGCTTCTGTGACGAGTGCCACAGGCAGATATTCT
CCACCCTCTTCGGCATTCCCCAGGGCCCTATGAACCCTGCACCGCAACCCAGCGAGGTCG
TTTCAGAGCTCAACGAAGAAATAACAGTACCAGACAATGTCACAGATCAGGAACAAGGAA
AATCAGGCCTGCCCTGATCAAGATCAGTTTTCAGGATCAACAGTATAGATACAAGACATT
ACTACTAAACACAACACCTCATATCGACGGGACAGGCTTTTCGTCGCTGCTTGTGGACTG
AGCTGCTCCTCTTGCGGAGTCTTGAAGGATGAAGGCAAAGTATTGGATAGAGGCTGTGCC
GTTTCACTTGGATGTACAAAAATGCTCATTACAGATTCGCACGGCACCTGCTCGGTGTGC
TTTTAGTATAGTCGGCATTAACATTCGATTAACCTGCTATGACTGCATTATAGGCTTCTT
TTAGCACATTTGTTTTGGCATGCGAACCCAATGGTTCAATTGCGTCCTCAGCTGAATTTT
GTTACTTTGTCAGGGACTGTTTGATGTAGCTCCACTAACTCTAGATTGA